Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001607-TA|BGIBMGA001607-PA|undefined
(88 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 2.1
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_10686| Best HMM Match : NOA36 (HMM E-Value=0.57) 26 4.9
SB_576| Best HMM Match : RVT_1 (HMM E-Value=0) 25 6.5
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 25 6.5
SB_19041| Best HMM Match : F5_F8_type_C (HMM E-Value=3e-29) 25 6.5
SB_18678| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
>SB_16642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 7 MNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
+ N+T+ + L+P L T KN++ + K L+ A++++N A+YI
Sbjct: 9 LEKNNTARYIWGLMPKTLSTSATALEKNNTARYIWGLMPKTLSTSATALEKNNTARYI 66
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 7 MNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
+ N+T+ + L+P L T KN++ + K L+ A++++N A+YI
Sbjct: 33 LEKNNTARYIWGLMPKTLSTSATALEKNNTARYIWGLMPKTLSTSATALEKNNTARYI 90
Score = 29.9 bits (64), Expect = 0.30
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 7 MNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
+ N+T+ + L+P L T KN++ + K L+ A++++N A+YI
Sbjct: 112 LEKNNTARYIWGLMPKTLSTSATPLEKNNTARYIWGLMPKTLSTSATALEKNNTARYI 169
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 22 PELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTII 79
P+L K L P+ + N++E+A K + +++ I+R +E ED + P + T +
Sbjct: 565 PKLVKGLPRPPRITPSNTSEKAADKRVERLKERIKRLHE----EVEDRFTPKEQQTAL 618
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQN 75
P+ S +TE +++ T+ R + + I+N D PV N
Sbjct: 85 PETQSTITTETPETQSTTDTRDPVNNRDTRDPINNRDTRDPVNN 128
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQN 75
P+ S +TE +++ T+ R + + I+N D PV N
Sbjct: 85 PETQSTITTETPETQSTTDTRDPVNNRDTRDPINNRDTRDPVNN 128
>SB_10686| Best HMM Match : NOA36 (HMM E-Value=0.57)
Length = 581
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 24 LHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTI 78
L ++LT H KN +++S ++L +++ +NE G VQ D+I
Sbjct: 322 LGRHLTGHAKNDALSSENNKTVRHLGRHLTGHAKNDALSSENNETAAGLVQYDSI 376
>SB_576| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1444
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 20 VPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
+ P LHK LT +++ + +R+ K + KA++ +Q +
Sbjct: 58 ITPPLHKALTSQKASNTASLNDRSERKRVLTRLKAVESCESSQIL 102
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 8 NSNDTSEQVLALVPPELHKYLTVHPK 33
N++ VL L+PP + +Y+ +HP+
Sbjct: 269 NNDRYRVNVLRLIPPVVAQYVRIHPQ 294
>SB_19041| Best HMM Match : F5_F8_type_C (HMM E-Value=3e-29)
Length = 156
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 8 NSNDTSEQVLALVPPELHKYLTVHPK 33
N++ VL L+PP + +Y+ +HP+
Sbjct: 113 NNDRYRVNVLRLIPPVVAQYVRIHPQ 138
>SB_18678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 25 HKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEA 61
++Y ++ KN ++ ++ R +N+T R + S+ A
Sbjct: 465 YQYFKINAKNGTITTSRRLDRENITTFRLRVTASDGA 501
>SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 29 TVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQN 75
T P+ S +TE +++ T+ R + + ++N D PV N
Sbjct: 3 TETPETQSTITTETPETQSTTDTRDPVNNRDIRDPVNNTDTRDPVNN 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,658,657
Number of Sequences: 59808
Number of extensions: 90345
Number of successful extensions: 263
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 232
Number of HSP's gapped (non-prelim): 31
length of query: 88
length of database: 16,821,457
effective HSP length: 65
effective length of query: 23
effective length of database: 12,933,937
effective search space: 297480551
effective search space used: 297480551
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
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