Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001607-TA|BGIBMGA001607-PA|undefined
(88 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL592301-6|CAI13935.1| 1469|Homo sapiens small nuclear RNA activ... 28 4.0
AF032387-1|AAC02972.1| 1469|Homo sapiens SNAP190 protein. 28 4.0
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 28 5.3
AY279349-1|AAQ62846.1| 146|Homo sapiens truncated zinc finger p... 28 5.3
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 28 5.3
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 28 5.3
BC067274-1|AAH67274.1| 750|Homo sapiens olfactomedin-like 2B pr... 27 7.0
AL590408-1|CAH71496.1| 598|Homo sapiens olfactomedin-like 2B pr... 27 7.0
AL391825-1|CAH73984.1| 598|Homo sapiens olfactomedin-like 2B pr... 27 7.0
AB119054-1|BAD38863.1| 750|Homo sapiens photomedin-2 protein. 27 7.0
BC132774-1|AAI32775.1| 622|Homo sapiens KIAA1467 protein. 27 9.2
BC132772-1|AAI32773.1| 622|Homo sapiens KIAA1467 protein. 27 9.2
BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing prot... 27 9.2
BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein. 27 9.2
BC039267-1|AAH39267.1| 622|Homo sapiens KIAA1467 protein. 27 9.2
AK125278-1|BAC86111.1| 622|Homo sapiens protein ( Homo sapiens ... 27 9.2
AK026785-1|BAB15552.1| 439|Homo sapiens protein ( Homo sapiens ... 27 9.2
AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein. 27 9.2
AB040900-1|BAA95991.1| 432|Homo sapiens KIAA1467 protein protein. 27 9.2
>AL592301-6|CAI13935.1| 1469|Homo sapiens small nuclear RNA
activating complex, polypeptidene phosphatase receptor
type V protein.
Length = 1469
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 6 LMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNS--TERAVSKNLTEIRKAIQRSNE 60
L+ + S+++ L+ P+L K +H K S V+S +A+ K E K IQ N+
Sbjct: 191 LLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEKEIQDINQ 247
>AF032387-1|AAC02972.1| 1469|Homo sapiens SNAP190 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 6 LMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNS--TERAVSKNLTEIRKAIQRSNE 60
L+ + S+++ L+ P+L K +H K S V+S +A+ K E K IQ N+
Sbjct: 191 LLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEKEIQDINQ 247
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYG 71
PKNS +S++R VS + +R + + + A + ++D+ G
Sbjct: 360 PKNSVSSSSQRRVSSSKISLRNSSKVTESASVMPSQDVSG 399
>AY279349-1|AAQ62846.1| 146|Homo sapiens truncated zinc finger
protein 29 isoform protein.
Length = 146
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 12 TSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIH 65
T EQ+L ++P E+ +L H SS + A+ ++LT+ +Q S A +H
Sbjct: 94 TKEQMLTMLPKEIQAWLQEHRPESSEEAA--ALVEDLTQ---TLQDSETASCVH 142
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYG 71
PKNS +S++R VS + +R + + + A + ++D+ G
Sbjct: 360 PKNSVSSSSQRRVSSSKISLRNSSKVTESASVMPSQDVSG 399
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYG 71
PKNS +S++R VS + +R + + + A + ++D+ G
Sbjct: 360 PKNSVSSSSQRRVSSSKISLRNSSKVTESASVMPSQDVSG 399
>BC067274-1|AAH67274.1| 750|Homo sapiens olfactomedin-like 2B
protein.
Length = 750
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQY 63
EE ++ N T E + ++ + T K N +E + ++ +IR A+QR A Y
Sbjct: 181 EEEVSKNLTKEN--EQIKEDMEEIRTEMNKRGKENCSENILD-SMPDIRSALQRDAAAAY 237
Query: 64 IHNEDIYGPVQNDTI 78
H E +Q +T+
Sbjct: 238 AHPEYEERFLQEETV 252
>AL590408-1|CAH71496.1| 598|Homo sapiens olfactomedin-like 2B
protein.
Length = 598
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQY 63
EE ++ N T E + ++ + T K N +E + ++ +IR A+QR A Y
Sbjct: 29 EEEVSKNLTKEN--EQIKEDMEEIRTEMNKRGKENCSENILD-SMPDIRSALQRDAAAAY 85
Query: 64 IHNEDIYGPVQNDTI 78
H E +Q +T+
Sbjct: 86 AHPEYEERFLQEETV 100
>AL391825-1|CAH73984.1| 598|Homo sapiens olfactomedin-like 2B
protein.
Length = 598
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQY 63
EE ++ N T E + ++ + T K N +E + ++ +IR A+QR A Y
Sbjct: 29 EEEVSKNLTKEN--EQIKEDMEEIRTEMNKRGKENCSENILD-SMPDIRSALQRDAAAAY 85
Query: 64 IHNEDIYGPVQNDTI 78
H E +Q +T+
Sbjct: 86 AHPEYEERFLQEETV 100
>AB119054-1|BAD38863.1| 750|Homo sapiens photomedin-2 protein.
Length = 750
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQY 63
EE ++ N T E + ++ + T K N +E + ++ +IR A+QR A Y
Sbjct: 181 EEEVSKNLTKEN--EQIKEDMEEIRTEMNKRGKENCSENILD-SMPDIRSALQRDAAAAY 237
Query: 64 IHNEDIYGPVQNDTI 78
H E +Q +T+
Sbjct: 238 AHPEYEERFLQEETV 252
>BC132774-1|AAI32775.1| 622|Homo sapiens KIAA1467 protein.
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 FAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSV 37
+AE L ++ S+ +L PP LH +HP S+
Sbjct: 497 WAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSI 532
>BC132772-1|AAI32773.1| 622|Homo sapiens KIAA1467 protein.
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 FAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSV 37
+AE L ++ S+ +L PP LH +HP S+
Sbjct: 497 WAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSI 532
>BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing protein
(p97)/p47 complex interacting protein 1 protein.
Length = 1222
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 26 KYLTVHPKNSSVNSTERAVSKNLTEIRKAIQR 57
K T+H + +++ TER + +N+TE +Q+
Sbjct: 698 KTKTLHKEELNMSKTERTIQQNITEQASVMQK 729
>BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein.
Length = 785
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 26 KYLTVHPKNSSVNSTERAVSKNLTEIRKAIQR 57
K T+H + +++ TER + +N+TE +Q+
Sbjct: 262 KTKTLHKEELNMSKTERTIQQNITEQASVMQK 293
>BC039267-1|AAH39267.1| 622|Homo sapiens KIAA1467 protein.
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 FAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSV 37
+AE L ++ S+ +L PP LH +HP S+
Sbjct: 497 WAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSI 532
>AK125278-1|BAC86111.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ43288 fis, clone MESAN2012054. ).
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 FAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSV 37
+AE L ++ S+ +L PP LH +HP S+
Sbjct: 497 WAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSI 532
>AK026785-1|BAB15552.1| 439|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23132 fis, clone LNG08559. ).
Length = 439
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 26 KYLTVHPKNSSVNSTERAVSKNLTEIRKAIQR 57
K T+H + +++ TER + +N+TE +Q+
Sbjct: 72 KTKTLHKEELNMSKTERTIQQNITEQASVMQK 103
>AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein.
Length = 1236
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 26 KYLTVHPKNSSVNSTERAVSKNLTEIRKAIQR 57
K T+H + +++ TER + +N+TE +Q+
Sbjct: 712 KTKTLHKEELNMSKTERTIQQNITEQASVMQK 743
>AB040900-1|BAA95991.1| 432|Homo sapiens KIAA1467 protein protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 FAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSV 37
+AE L ++ S+ +L PP LH +HP S+
Sbjct: 307 WAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSI 342
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.311 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,978,834
Number of Sequences: 224733
Number of extensions: 319190
Number of successful extensions: 810
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 794
Number of HSP's gapped (non-prelim): 23
length of query: 88
length of database: 73,234,838
effective HSP length: 66
effective length of query: 22
effective length of database: 58,402,460
effective search space: 1284854120
effective search space used: 1284854120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -