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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001607-TA|BGIBMGA001607-PA|undefined
         (88 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   3.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   3.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   6.9  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    19   6.9  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    19   6.9  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    19   6.9  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    19   6.9  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    19   6.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    19   6.9  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    19   6.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   9.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 39  STERAVSKNLTEIRKAIQRSNEAQYIHNEDIY 70
           S+E     N   + K+  + N+ QY   +D++
Sbjct: 270 SSENLYYVNTESLMKSENQGNDVQYERVQDVF 301


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 61  AQYIHNEDIYGPVQNDTIIIAIQV 84
           A+++ NED+Y   + D   +A+ +
Sbjct: 455 AEHLRNEDLYIQTREDWKYVAMVI 478


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 29  TVHPK-NSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQ 74
           TV  K N    S ++ +     +  K ++ SNE   +   D+ GP Q
Sbjct: 238 TVKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSKVKVIDMTGPEQ 284


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
          determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
          KN +     R  SK  +  RK  +RS E + I
Sbjct: 51 KNENSYRKYRETSKERSRDRKERERSKEPKII 82


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
          determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
          KN +     R  SK  +  RK  +RS E + I
Sbjct: 51 KNENSYRKYRETSKERSRDRKERERSKEPKII 82


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
          determiner protein.
          Length = 176

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
          KN +     R  SK  +  RK  +RS E + I
Sbjct: 51 KNENSYRKYRETSKERSRDRKERERSKEPKII 82


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
          determiner protein.
          Length = 177

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
          KN +     R  SK  +  RK  +RS E + I
Sbjct: 51 KNENSYRKYRETSKERSRDRKERERSKEPKII 82


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
          determiner protein.
          Length = 178

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
          KN +     R  SK  +  RK  +RS E + I
Sbjct: 51 KNENSYRKYRETSKERSRDRKERERSKEPKII 82


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33  KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
           KN +     R  SK  +  RK  +RS E + I
Sbjct: 284 KNENSYRKYRETSKERSRDRKERERSKEPKII 315


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33  KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
           KN +     R  SK  +  RK  +RS E + I
Sbjct: 284 KNENSYRKYRETSKERSRDRKERERSKEPKII 315


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
          protein.
          Length = 424

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)

Query: 68 DIYGPVQNDTIIIAI 82
          D+Y   Q  T+ +AI
Sbjct: 63 DVYNTEQQSTVFVAI 77


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.126    0.335 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,520
Number of Sequences: 429
Number of extensions: 761
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 88
length of database: 140,377
effective HSP length: 48
effective length of query: 40
effective length of database: 119,785
effective search space:  4791400
effective search space used:  4791400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.6 bits)
S2: 37 (19.0 bits)

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