Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001606-TA|BGIBMGA001606-PA|undefined
(226 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 41 0.003
AF111162-1|AAD43651.1| 1849|Homo sapiens guanine nucleotide exch... 32 1.4
AF084520-1|AAD38427.1| 1849|Homo sapiens brefeldin A-inhibited g... 31 3.3
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 31 4.4
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 16/182 (8%)
Query: 17 LHLAEGPIPHYYRHSPLQLCTDPELFSYTNRHRSDL-------HLAMGPISHYYRPSPLR 69
+H H + H CT +YT+RH L + M SH +R
Sbjct: 15 MHTDTHTCTHIHSHIHTFTCTHIHRRTYTHRHTHTLMHTNKYIYTHMHIHSHAHRHIHTH 74
Query: 70 LCTDPELFSYTNRHRSDLH--LAEGPIPHYYRHSPLPFYTDPELFSYTNRHRSDLHLAED 127
+CT +YT+ H +G I H + H+ +T + + + H +++
Sbjct: 75 ICTHAHTLTYTHIHTCTYKRTYIQGHI-HTHMHTYTHAHTHAHIHIHVHIH---MNIHTH 130
Query: 128 PIPHYYRYSPLRLCTDPELFSYTNRH-RSDLHLAEGPIPNYYRPSPLRLCTDPELFSCTN 186
H Y + +CT + YT+ H + +H+ + Y + CT ++ +CT+
Sbjct: 131 TCTHIYTCTYTVVCTHTHMHIYTHMHTHTCIHIHSDTHLHIY--THTLTCTQTQIHTCTH 188
Query: 187 RH 188
H
Sbjct: 189 TH 190
Score = 36.3 bits (80), Expect = 0.088
Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 15 SDLHLAEGPIPHYYRHSPLQLCTDPELFSYTNRHRSDLHLAMGPISHYYRPSPLRLCTDP 74
S +H H Y H+ + +CT + +T H +H M H + + + +
Sbjct: 231 SHIHTWTHTHAHTYTHAHIHVCTHIHMHIHTYTH---MHTHMDTYPHTHIHTCTHMHSHA 287
Query: 75 ELFSYTNRHRSDLHLAEGPIPHYYRHSPLPFYTDPELFSYTNRH-RSDLHLAEDPIPHYY 133
+ ++T+ H +H+ H Y H+ + + + +YT H R+ H+ H
Sbjct: 288 HINTHTHAH-IHMHMHTHTHTHTYTHAHAHIHINTYMHTYTYTHIRTYTHIQ----MHTL 342
Query: 134 RYSPLRLCTDPELFSYTNRH 153
++ + T ++ YT+ H
Sbjct: 343 TWTHIHTHTHIHIYVYTHTH 362
Score = 35.9 bits (79), Expect = 0.12
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 26 HYYRHSPLQLCTDPELFSYTNRHRSDLHLAMGPISHYYRPSPLRLCTDPELFSYTNRH-R 84
H + H + + T +YT+ H H+ + H Y + +R T ++ + T H
Sbjct: 292 HTHAHIHMHMHTHTHTHTYTHAHA---HIHINTYMHTYTYTHIRTYTHIQMHTLTWTHIH 348
Query: 85 SDLHLAEGPIPHYYRHSPLPFYTDPELFSYTNRHRSDLHLAEDPIPHYYRY 135
+ H+ H + H+P Y ++Y + H + +H+ H + Y
Sbjct: 349 THTHIHIYVYTHTHMHTPTHIYAHRHTYTYAHSH-TYIHMHTHIHTHIHTY 398
Score = 30.7 bits (66), Expect = 4.4
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 15/195 (7%)
Query: 26 HYYRHSPLQLCTDPELFSYTNRHRSDLH--LAMGPISHYYRPSPLRLCTDPELFSYTNRH 83
H +RH +CT +YT+ H G I H + + T + + + H
Sbjct: 66 HAHRHIHTHICTHAHTLTYTHIHTCTYKRTYIQGHI-HTHMHTYTHAHTHAHIHIHVHIH 124
Query: 84 RSDLHLAEGPIPHYYRHSPLPFYTDPELFSYTNRH-RSDLHLAEDPIPHYYRYSPLRLCT 142
+++ H Y + T + YT+ H + +H+ D H + Y+ CT
Sbjct: 125 ---MNIHTHTCTHIYTCTYTVVCTHTHMHIYTHMHTHTCIHIHSD--THLHIYTHTLTCT 179
Query: 143 DPELFSYTNRHRSDLHLAEGPIPNYYRPSPLRLCTDPELFSCTNRH-----RSDLHLAEG 197
++ + T+ H +H+ + + CT +++ H S +H
Sbjct: 180 QTQIHTCTHTH-IHIHMPTHTRTYTHMHTHTLTCTQIHIYTHIYMHAHTPIHSHIHTWTH 238
Query: 198 PIPHYYRHSPLQFYT 212
H Y H+ + T
Sbjct: 239 THAHTYTHAHIHVCT 253
>AF111162-1|AAD43651.1| 1849|Homo sapiens guanine nucleotide
exchange factor protein.
Length = 1849
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 82 RHRSDLHLAEGPIPHYYRHSPLPFYTDPELFSY-TNRHRSDLHL 124
RHR HL + P+ H+ SP Y P+ + + H DL L
Sbjct: 224 RHRQHHHLLQSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDL 267
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 47 RHRSDLHLAMGPISHYYRPSP-LRLCTDPELFSYTNRHRSDLHL 89
RHR HL P+SH+ SP LR + + H DL L
Sbjct: 224 RHRQHHHLLQSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDL 267
>AF084520-1|AAD38427.1| 1849|Homo sapiens brefeldin A-inhibited
guanine nucleotide-exchange protein 1 protein.
Length = 1849
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 82 RHRSDLHLAEGPIPHYYRHSPLPFYTDPELFSY-TNRHRSDLHL 124
RHR HL P+ H+ SP Y P+ + + H DL L
Sbjct: 224 RHRQHHHLLPSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDL 267
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 30.7 bits (66), Expect = 4.4
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 26 HYYRHSPLQLCTDPELFSYTNRHRSDL---HLAMGPISHYYRPSPLRLCTDPELFSYTNR 82
H + H+ + T + S T H L H+ ++H + + T +++T+
Sbjct: 90 HMHSHTHIHSHTHSHIHSNTPTHTHPLTSTHIQTSTVTHTHSHTHAHKHT----YTHTST 145
Query: 83 HRSDLHLAEG-PIPHYYRHSPLPFYTDPELFSYTNRHRSDLHLAEDPIPH 131
H L PI H H+P +T S+T+ H + +H P+ H
Sbjct: 146 HTHPLTFTHTYPITHPLTHTPTHTHTHALTHSHTHIH-THMHSHTHPLTH 194
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.140 0.455
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,209,484
Number of Sequences: 224733
Number of extensions: 2206665
Number of successful extensions: 3219
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3206
Number of HSP's gapped (non-prelim): 15
length of query: 226
length of database: 73,234,838
effective HSP length: 87
effective length of query: 139
effective length of database: 53,683,067
effective search space: 7461946313
effective search space used: 7461946313
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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