GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001604-TA|BGIBMGA001604-PA|undefined
         (105 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4DPD8 Cluster: Kinesin, putative; n=2; Trypanosoma|Rep...    31   4.5  
UniRef50_Q49MF5 Cluster: Vitellogenin C1; n=1; Culex pipiens qui...    31   4.5  
UniRef50_A0EAL0 Cluster: Chromosome undetermined scaffold_86, wh...    31   4.5  
UniRef50_Q26EZ6 Cluster: Putative cysteine protease; n=1; Flavob...    31   5.9  
UniRef50_Q54H15 Cluster: Putative uncharacterized protein; n=1; ...    31   5.9  
UniRef50_Q44N39 Cluster: Metallophosphoesterase; n=6; Chlorobium...    30   7.8  

>UniRef50_Q4DPD8 Cluster: Kinesin, putative; n=2; Trypanosoma|Rep:
           Kinesin, putative - Trypanosoma cruzi
          Length = 876

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 18  KKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKELSR 54
           KKD C +C A  + +  +K R+  K E   K+K L R
Sbjct: 825 KKDDCAECSATASVSPPEKERIYEKNEKKKKKKNLHR 861


>UniRef50_Q49MF5 Cluster: Vitellogenin C1; n=1; Culex pipiens
            quinquefasciatus|Rep: Vitellogenin C1 - Culex
            quinquefasciatus (Southern house mosquito)
          Length = 2111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 10   FNIAFYQPKKDQC-EDCVAYNNATGE-DKNRLRPKYENHLKEKELS 53
            FNIA+ Q  K++C ++ V Y N   E +  R R +Y NH  E   S
Sbjct: 1916 FNIAYQQKAKEECVKEEVFYGNVISEQEAGRKRYRYYNHNVEDSSS 1961


>UniRef50_A0EAL0 Cluster: Chromosome undetermined scaffold_86, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_86,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1385

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 2   FNRIFNGEFNIA-FYQPKKDQCEDCVAYN-NATGEDKNRLRPKYENHLKEKELS 53
           F  I NG+F I    Q KKD   D   +N   T E+   ++ KYEN+ ++  LS
Sbjct: 817 FEVISNGQFEIEPLKQEKKDDENDDETFNLPLTKENLEMMQKKYENNSQKSHLS 870


>UniRef50_Q26EZ6 Cluster: Putative cysteine protease; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative cysteine
           protease - Flavobacteria bacterium BBFL7
          Length = 326

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 73  AVYDLQAVMPCPRGDVSNFYCVS--SKYYLKLY 103
           AVYDL  +MP PR   +   CVS  + YYL  Y
Sbjct: 83  AVYDLGFLMPAPRSQGAQGSCVSWATHYYLATY 115


>UniRef50_Q54H15 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1966

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 9    EFNIAF--YQPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKE 49
            ++NI F  Y+  KD+ ED +  NN+  E+  ++R K E++  E
Sbjct: 1155 KYNILFRLYKEIKDKEEDFINENNSINEEMKQIRKKIESYQNE 1197


>UniRef50_Q44N39 Cluster: Metallophosphoesterase; n=6;
           Chlorobium/Pelodictyon group|Rep: Metallophosphoesterase
           - Chlorobium limicola DSM 245
          Length = 262

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 33  GEDKNRLRPKYENHLKEKELSRIXXXXXXXXXXXXXXTIVAVY--DLQAVMPCPRGDVSN 90
           G D  RLRP+Y   L  K+ +R+               +V  +   +Q + PC R D  N
Sbjct: 142 GVDYRRLRPEYILELHHKQKTRLFEDADHYADLGYTVIVVTHHHPSMQGIAPCYRNDPLN 201

Query: 91  FYCVS 95
              VS
Sbjct: 202 AAFVS 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.322    0.138    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,991,919
Number of Sequences: 1657284
Number of extensions: 3122198
Number of successful extensions: 6031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6029
Number of HSP's gapped (non-prelim): 7
length of query: 105
length of database: 575,637,011
effective HSP length: 82
effective length of query: 23
effective length of database: 439,739,723
effective search space: 10114013629
effective search space used: 10114013629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)