GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001604-TA|BGIBMGA001604-PA|undefined
         (105 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   0.77 
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    21   9.4  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 8   GEFNIAFYQPKKDQCEDCVAYNNATGEDKN 37
           G  N+  + P      D V YNNA G D++
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNAGGSDQH 135


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
          initiation factor 4C (1A) protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 36 KNRLRPKYENHLKEKEL 52
          KNR R K EN  +++EL
Sbjct: 10 KNRRRGKNENESEKREL 26


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,939
Number of Sequences: 2123
Number of extensions: 3243
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 105
length of database: 516,269
effective HSP length: 55
effective length of query: 50
effective length of database: 399,504
effective search space: 19975200
effective search space used: 19975200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)