BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001604-TA|BGIBMGA001604-PA|undefined (105 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein... 30 1.5 U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subuni... 27 7.8 AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subu... 27 7.8 >AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein complex 3 delta 1 subunit variant protein. Length = 1284 Score = 29.9 bits (64), Expect = 1.5 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 7/51 (13%) Query: 8 GEFNIAFYQPKKDQCEDCVAY-----NNATGEDKNRL--RPKYENHLKEKE 51 GE ++ KD+CED ++A G+D+++ +PK + H KEKE Sbjct: 963 GELSVNTVTTPKDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKE 1013 >U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subunit protein. Length = 1112 Score = 27.5 bits (58), Expect = 7.8 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 7/42 (16%) Query: 17 PKKDQCEDCVAY-----NNATGEDKNRL--RPKYENHLKEKE 51 P D+CED ++A G+D+++ +PK + H KEKE Sbjct: 800 PSTDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKE 841 >AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subunit, partial CDS protein. Length = 1079 Score = 27.5 bits (58), Expect = 7.8 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 7/42 (16%) Query: 17 PKKDQCEDCVAY-----NNATGEDKNRL--RPKYENHLKEKE 51 P D+CED ++A G+D+++ +PK + H KEKE Sbjct: 767 PSTDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKE 808 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.322 0.138 0.424 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,674,137 Number of Sequences: 224733 Number of extensions: 400129 Number of successful extensions: 696 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 696 Number of HSP's gapped (non-prelim): 3 length of query: 105 length of database: 73,234,838 effective HSP length: 79 effective length of query: 26 effective length of database: 55,480,931 effective search space: 1442504206 effective search space used: 1442504206 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 58 (27.5 bits)
- SilkBase 1999-2023 -