GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001604-TA|BGIBMGA001604-PA|undefined
         (105 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011398-1|AAR96190.1|  293|Drosophila melanogaster AT25465p pro...    27   6.2  
AY113274-1|AAM29279.1|  184|Drosophila melanogaster AT17004p pro...    27   6.2  
AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p pro...    27   6.2  
AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA...    27   6.2  
AE014134-2828|AAF53602.1|  293|Drosophila melanogaster CG6380-PA...    27   6.2  
AY128496-1|AAM75089.1|  555|Drosophila melanogaster RH44244p pro...    26   8.2  
AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-P...    26   8.2  
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P...    26   8.2  

>BT011398-1|AAR96190.1|  293|Drosophila melanogaster AT25465p
           protein.
          Length = 293

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 2   FNRIFNGEFNIAFYQPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKE 51
           F  + + EFNI   +   + CE C   N   GE  N  + KY     + E
Sbjct: 137 FAELTSSEFNI-HCEGGMESCEACSENNQLDGEASNLTQTKYSYSESQSE 185


>AY113274-1|AAM29279.1|  184|Drosophila melanogaster AT17004p
          protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 2  FNRIFNGEFNIAFYQPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKE 51
          F  + + EFNI   +   + CE C   N   GE  N  + KY     + E
Sbjct: 28 FAELTSSEFNI-HCEGGMESCEACSENNQLDGEASNLTQTKYSYSESQSE 76


>AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p
           protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 18  KKDQCEDCVAYN--NATGEDKNRLRPKYENHLKEKELSR 54
           KK + +D   Y+  NA  E+K + +    N LK+KEL+R
Sbjct: 292 KKKEDDDEKPYHTINAPVENKKKSKQARRNELKQKELAR 330


>AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA
           protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 18  KKDQCEDCVAYN--NATGEDKNRLRPKYENHLKEKELSR 54
           KK + +D   Y+  NA  E+K + +    N LK+KEL+R
Sbjct: 292 KKKEDDDEKPYHTINAPVENKKKSKQARRNELKQKELAR 330


>AE014134-2828|AAF53602.1|  293|Drosophila melanogaster CG6380-PA
           protein.
          Length = 293

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 2   FNRIFNGEFNIAFYQPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKE 51
           F  + + EFNI   +   + CE C   N   GE  N  + KY     + E
Sbjct: 137 FAELTSSEFNI-HCEGGMESCEACSENNQLDGEASNLTQTKYSYSESQSE 185


>AY128496-1|AAM75089.1|  555|Drosophila melanogaster RH44244p
           protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 16  QPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKELSR 54
           Q  K++ E          E+K R++ K +  LKEKE+ +
Sbjct: 366 QQAKEENERAKEEKERAKEEKERVKEKEKERLKEKEIEK 404


>AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-PB,
            isoform B protein.
          Length = 1259

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 16   QPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKELSR 54
            Q  K++ E          E+K R++ K +  LKEKE+ +
Sbjct: 1070 QQAKEEKERAKEEKERAKEEKERVKEKEKERLKEKEIEK 1108


>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
            isoform A protein.
          Length = 1338

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 16   QPKKDQCEDCVAYNNATGEDKNRLRPKYENHLKEKELSR 54
            Q  K++ E          E+K R++ K +  LKEKE+ +
Sbjct: 1149 QQAKEEKERAKEEKERAKEEKERVKEKEKERLKEKEIEK 1187


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.138    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,815,946
Number of Sequences: 52641
Number of extensions: 146677
Number of successful extensions: 330
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 325
Number of HSP's gapped (non-prelim): 10
length of query: 105
length of database: 24,830,863
effective HSP length: 74
effective length of query: 31
effective length of database: 20,935,429
effective search space: 648998299
effective search space used: 648998299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)