GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001603-TA|BGIBMGA001603-PA|IPR002156|Ribonuclease H,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
         (348 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           27   1.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           27   1.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           26   1.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    26   1.3  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           26   1.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           26   1.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.4  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   9.5  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   9.5  

>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  NI   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNIAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
              +    T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWT---DPTITT---TTPIWTDPTTWSAPTTTTTWSDQPPPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  NI   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNIAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
              +    T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWT---DPTITT---TTPIWTDPTTWSAPTTTTTWSDQPPPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  N+   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNVAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
              +    T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWT---DPTITT---TTPIWTDPTTWSAPTTTTTWSDQPPPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  N+   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNVAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
                   T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTKFPTTTTTSAPTTPSQWT---DPTITT---TTPVWTDPTTWSAPTTTTTWSDQPPPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  N+   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNVAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
              +    T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWT---DPTITT---TTPIWTDPTTWSAPTTTTTWSDQPRPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  GLPSNITRSVEDLPFVVNLQLRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 86
           GL  N+   V D P  VN +   ++ G      L   +T+L       +   +T  ++ T
Sbjct: 70  GLHFNVAIDVCDFP--VNAKCESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEAT 127

Query: 87  HRASCSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHATFKLSLDSP 146
              +    T      TP Q+    D  I     T+P W    TW+   T  T+      P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWT---DPTITT---TTPIWTDPTTWSAPTTTTTWSDQPRPP 181

Query: 147 QTSSST 152
            T+++T
Sbjct: 182 TTTTTT 187


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 302 TGIQKTPPTKPWYAKTTLNSRK-QITVINRLRVGHCHVQWAFEKIAYS 348
           T I ++PP  PW  +T  N +K ++  + R R+      +   K A S
Sbjct: 324 TPIFRSPPNPPWSNRTLRNLKKDRMKYLRRYRLNRSAFNFRLFKYAAS 371


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 295 EFKGKWYTGIQKTPPTKPWYAKTTLNSRKQITVINRLRVGHCHV 338
           EF    YT  +     +    +TT+  RKQ  V+ R R+  C++
Sbjct: 571 EFISPQYTVDKVATNPQNCLKQTTIEHRKQEEVLKRFRMHECNL 614


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 77  AASTGPSQPTHR 88
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 131 TTHDTHATFKLSLDSPQTSSSTGDNHAAFSSINNNC-SIFTAEWY 174
           T+ D+ ++   S  S  +SSS  D H  +SS  ++  S+ + E+Y
Sbjct: 449 TSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFY 493


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 131 TTHDTHATFKLSLDSPQTSSSTGDNHAAFSSINNNC-SIFTAEWY 174
           T+ D+ ++   S  S  +SSS  D H  +SS  ++  S+ + E+Y
Sbjct: 449 TSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFY 493


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 120 TSPAWQLCITWTTHDTHATFKLSLDSPQTSSST 152
           T+P W    TW+   T  T+      P T+++T
Sbjct: 154 TTPVWTDPTTWSAPTTTTTWSDQPPPPTTTTTT 186


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 120 TSPAWQLCITWTTHDTHATFKLSLDSPQTSSST 152
           T+P W    TW+   T  T+      P T+++T
Sbjct: 154 TTPVWTDPTTWSAPTTTTTWSDQPPPPTTTTTT 186


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.132    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,299
Number of Sequences: 2123
Number of extensions: 14380
Number of successful extensions: 28
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 13
length of query: 348
length of database: 516,269
effective HSP length: 65
effective length of query: 283
effective length of database: 378,274
effective search space: 107051542
effective search space used: 107051542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)