Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001602-TA|BGIBMGA001602-PA|IPR007087|Zinc finger,
C2H2-type
(400 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 61 2e-10
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 50 8e-07
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 45 2e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 44 3e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 42 2e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 37 0.004
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 34 0.031
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 34 0.041
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.071
SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 31 0.38
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 30 0.66
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 29 1.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 29 1.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 29 1.5
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 28 2.0
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 28 2.0
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 4.7
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 61.3 bits (142), Expect = 2e-10
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 48 ICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERL 107
+C +T C++ F L H + H N + F C + GC A F T+ L H+ H +
Sbjct: 54 VCDYTGCSKAFYRKSHLKIHKRCHTNV-KPFSCHYDGCDAQFYTQQHLERHIEVHRKPKP 112
Query: 108 IAC--YHCGQHFANNRKLRDHLRRQNVDPESPFKCTM--CGIPCATEYLLNEH---ARQH 160
AC C + F+ +++LR H+ + P+ CT C + AT+ L H A +
Sbjct: 113 YACTWEGCDECFSKHQQLRSHISACHTH-LLPYPCTYQDCELRFATKQKLQNHVNRAHEK 171
Query: 161 VSAHVCALCDMTATSP----AALAQHVRYRHLPRAPHHACTRCAYRAVTKNDLQKHLMIH 216
+ ++ C + L H+R H+P +C+ C + T L+ H+++H
Sbjct: 172 IISYSCPHESCVGHEGFEKWSQLQNHIREAHVP-----SCSICGRQFKTAAHLRHHVVLH 226
Score = 60.9 bits (141), Expect = 3e-10
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 49 CMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLI 108
C + +C +K++ +L H + H N F+C + GC F K+ L H R HT +
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSN-ERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPF 83
Query: 109 ACYH--CGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLNEHARQHVSA-HV 165
+C++ C F + L H+ P+ CT G C + ++ R H+SA H
Sbjct: 84 SCHYDGCDAQFYTQQHLERHIEVHR--KPKPYACTWEG--CDECFSKHQQLRSHISACHT 139
Query: 166 CAL--------CDMTATSPAALAQHVRYRHLP----RAPHHACTRCAYRAVTK-NDLQKH 212
L C++ + L HV H PH +C + K + LQ H
Sbjct: 140 HLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCV--GHEGFEKWSQLQNH 197
Query: 213 L 213
+
Sbjct: 198 I 198
Score = 59.7 bits (138), Expect = 7e-10
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 14/166 (8%)
Query: 58 FNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHF 117
FN + I + L + + F C + CG ++ +LL H+R+H+ ER C + G
Sbjct: 4 FNELSIEIESKNLR-SAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSK 62
Query: 118 ANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLNEHARQHVSAH------VCAL--C 169
A RK + ++ PF C G C ++ +H +H+ H C C
Sbjct: 63 AFYRKSHLKIHKRCHTNVKPFSCHYDG--CDAQFYTQQHLERHIEVHRKPKPYACTWEGC 120
Query: 170 DMTATSPAALAQHVRYRHLPRAPHHACT--RCAYRAVTKNDLQKHL 213
D + L H+ H P + CT C R TK LQ H+
Sbjct: 121 DECFSKHQQLRSHISACHTHLLP-YPCTYQDCELRFATKQKLQNHV 165
Score = 57.6 bits (133), Expect = 3e-09
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 44 PNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHV-RSH 102
P + C W C+ F+ Q L H + + C++ C F TK L HV R+H
Sbjct: 110 PKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAH 169
Query: 103 TGERLIACYH--CGQH--FANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLNEHAR 158
+C H C H F +L++H+R +V C++CG T L H
Sbjct: 170 EKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP-----SCSICGRQFKTAAHLRHHVV 224
Query: 159 QHVS------AHVCAL--CDMTATSPAALAQHVRYRHLPRAPHHACTRCAYRAVTKNDLQ 210
H + + C + C + T +AL +H+ H H C C + K+ LQ
Sbjct: 225 LHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFH-CDSCGTKFGYKHMLQ 283
Query: 211 KHL 213
+HL
Sbjct: 284 RHL 286
Score = 46.0 bits (104), Expect = 9e-06
Identities = 46/188 (24%), Positives = 67/188 (35%), Gaps = 11/188 (5%)
Query: 36 KRNQLPNLPNE-HICMWTDCNRKFNSIQILFDHAKLHVNYSEK---FLCSWAGCGAWFTT 91
K +QL N E H+ + C R+F + L H LH E+ + C GC FT
Sbjct: 190 KWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTR 249
Query: 92 KALLGAHVRS-HTGERLIACYHCGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATE 150
+ L H+ H G C CG F L+ HL R CGI +
Sbjct: 250 SSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGI----K 305
Query: 151 YLLNEHARQHVSAHVCALCDMTATSPAALAQHVRYRHLPRAPHHACT--RCAYRAVTKND 208
+ E H ++ + + V A ++C+ C YR D
Sbjct: 306 HDGIEGVAIHDQKEKELSSNLVSDVAKKIINEVTGHGYKEAREYSCSFPECNYRFKRLYD 365
Query: 209 LQKHLMIH 216
+ +HL H
Sbjct: 366 MHRHLNSH 373
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 49.6 bits (113), Expect = 8e-07
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 33 NSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTK 92
+S+K ++C + CN++F L H H NY F CS C F +
Sbjct: 556 SSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNY-RPFQCSI--CKKSFARQ 612
Query: 93 ALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQ 130
H + HTG + AC C Q FA L H + +
Sbjct: 613 HDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSE 650
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 68 AKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHL 127
AK ++C++AGC FT L +H+ +HT R C C + FA R H
Sbjct: 560 AKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFA-----RQHD 614
Query: 128 RRQNVDPESPFKCTMCGIPCATEYLLNEHARQHVSAHVCALCDMTAT 174
+R++ + K C + C + + +H + V C TAT
Sbjct: 615 KRRHEQLHTGIKAFAC-VTCNQRFARMDALNRHYKSEVGQNCLRTAT 660
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 44.8 bits (101), Expect = 2e-05
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 40 LPNLPNEHICMWTDCN-RKFNSIQILFDHAKLHVNYSEKFLCSWAGC---GAWFTTKALL 95
L NL + HI T N R ++I + DH N K+ C W C G T++ L
Sbjct: 38 LDNLVH-HIHNGTTSNLRLISNINSILDHIG---NRRPKYTCEWDDCPRKGMVQTSRFAL 93
Query: 96 GAHVRSHTGERLIACY--HCGQHFANNRKLRDHLR 128
AH+RSHTGE+ C C + F + L H+R
Sbjct: 94 VAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 33.1 bits (72), Expect = 0.071
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 38 NQLPNLPNEHICMWTDCNRKF---NSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKAL 94
+ + N ++ C W DC RK S L H + H + F+CS C FT
Sbjct: 64 DHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTG-EKPFICSVPECDRSFTRSDA 122
Query: 95 LGAHVRS-HTGERL 107
L H+R+ H + L
Sbjct: 123 LAKHMRTVHEADTL 136
Score = 31.9 bits (69), Expect = 0.16
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 79 LCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHL--RRQNVDPES 136
+C W C T L H+ + T L + +N + DH+ RR E
Sbjct: 25 ICHWQSCEQDLLTLDNLVHHIHNGTTSNL-------RLISNINSILDHIGNRRPKYTCEW 77
Query: 137 PFKCTMCGIPCATEYLLNEHARQHVSAH--VCAL--CDMTATSPAALAQHVRYRH 187
C G+ + + L H R H +C++ CD + T ALA+H+R H
Sbjct: 78 D-DCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 77 KFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNV 132
++ C + GC FT K H RSHT + C HC F + L H+ +++V
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHV 71
Score = 33.1 bits (72), Expect = 0.071
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 138 FKCTMCGIPCATEYLLNEHARQHVSAH------VCALCDMTATSPAALAQHVRYRHL 188
+KC G C + EHAR+H +H +C C + T L +HV +H+
Sbjct: 17 YKCDFQG--CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHV 71
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 77 KFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPES 136
+F C++ C FT K L H R+H + +C C + FA + L H+++ ++ ++
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Query: 137 PFKCTMCGIPCATEYLLNEH 156
+ M C + + H
Sbjct: 85 LSERRMLNASCFLGFCVLAH 104
Score = 29.5 bits (63), Expect = 0.88
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 31 KKNSTKRNQLPNLPNEHI-CMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWF 89
+K KR++ L + C + DC + F + L H + H N + F CS+ C F
Sbjct: 9 EKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENV-KAFSCSF--CNRAF 65
Query: 90 TTKALLGAHVR 100
+L HV+
Sbjct: 66 ARSDVLNRHVQ 76
Score = 29.1 bits (62), Expect = 1.2
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 89 FTTKALLGAHVRSHTGERLIACYH--CGQHFANNRKLRDHLR-RQNVDPESPFKCTMCGI 145
FT K L G+ C + C + F LR H R +NV F C+ C
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENV---KAFSCSFCNR 63
Query: 146 PCATEYLLNEHARQ 159
A +LN H +Q
Sbjct: 64 AFARSDVLNRHVQQ 77
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 143 CGIP-CATEYLLNEHARQH------VSAHVCALCDMTATSPAALAQHVRYRHLPR 190
C P C + EH R+H V A C+ C+ L +HV+ HL +
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 77 KFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLR 128
K++C + GC K + +H+++H +R C C F + L+ HLR
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
Score = 33.1 bits (72), Expect = 0.071
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 41 PNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVR 100
P +++C++ CN++ + H + H++ + C C A F L H+R
Sbjct: 437 PEADGKYVCLYNGCNKRIARKYNVESHIQTHLS-DRPYRCDL--CKAGFVRHHDLKRHLR 493
Query: 101 SHTGERLIACYHCGQHFANNRKLRDHLRR 129
H R C C + F L H +R
Sbjct: 494 IHENGRPYVC-ECLKRFNRLDALNRHKQR 521
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 34.3 bits (75), Expect = 0.031
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 17 IGLNGRATLKLERCKKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHAK-LHVNYS 75
IG +G ++K + ++ S ++ +P P + +C++KF + L H + LH +
Sbjct: 393 IGTDG--SMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTS-E 449
Query: 76 EKFLCSWAGCGAWFTTKALLGAHVRSH-TGERLIACY 111
+ F+C CG F+ + L H R H +AC+
Sbjct: 450 KPFVCI---CGKRFSRRDNLRQHERLHVNASPRLACF 483
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 76 EKFLCSWAGCGAWFTTKALLGAHVRS-HTGERLIACYHCGQHFANNRKLRDHLR 128
+ F+C C F L H+RS HT E+ C CG+ F+ LR H R
Sbjct: 421 KSFVCP--ECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHER 471
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 54 CNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCG 86
C ++F+ L H +LHVN S + C + G
Sbjct: 456 CGKRFSRRDNLRQHERLHVNASPRLACFFQPSG 488
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 98 HVRSHTGERLIACYH--CGQHFANN----RKLRDHLRRQNVDPE 135
H+RSHTGE+ C + C + F R +R HLR+ V PE
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVTPE 65
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 54 CNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLI 108
C R F+ + H + H + F CS+ C FT + L HVR+H + L+
Sbjct: 9 CKRVFHRQEHQVRHIRSHTG-EKPFECSYPSCKKRFTRRDELIRHVRTHLRKALV 62
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 33.1 bits (72), Expect = 0.071
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 52 TDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSH 102
T+C + F+ L H H F+C +AGCG F ++ + H R H
Sbjct: 471 TECLQGFSRPSSLKIHTYSHTG-ERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 31.5 bits (68), Expect = 0.22
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 85 CGAWFTTKALLGAHVRSHTGERLIACYH--CGQHFANNRKLRDHLR 128
C F+ + L H SHTGER C + CG+ F +R H R
Sbjct: 473 CLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
>SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 112
Score = 30.7 bits (66), Expect = 0.38
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 301 VYRLTTTRYEVLEVSNKIF---ARDSGPKQSLNENLDFKLKQVAEPTFD 346
+YR TTT Y + N ++ A S P+Q + +N+ F+ + P FD
Sbjct: 1 MYRPTTTSYSPVYTGNPLYDISASQSDPRQRIRKNVRFQTEVDEFPDFD 49
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.66
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 41 PNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVR 100
P+ P + C C + F ++ H + H + +C++ GC F+ L H R
Sbjct: 20 PDAPRPYKCPL--CTKAFYRLEHQTRHIRTHTG-EKPHVCTFPGCAKRFSRSDELTRHAR 76
Query: 101 SHT 103
HT
Sbjct: 77 IHT 79
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 47 HICMWTDCNRKFNSIQILFDHAKLHVNYSEK 77
H+C + C ++F+ L HA++H N + +
Sbjct: 54 HVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 98 HVRSHTGERLIACYH--CGQHFANNRKLRDHLR 128
H+R+HTGE+ C C + F+ + +L H R
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 29.1 bits (62), Expect = 1.2
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 40 LPNLPNEH---ICMWTDCNRKFNSIQILFDHAKLHVNYSEKFL-CSWAGCGAWFTTKALL 95
LP P EH + W C +K N +LFD +K +E +L C+W W T + L
Sbjct: 2585 LPYSPTEHGFWLDHWILCAQKLNQWDVLFDFSK-QEGCAELYLECAWR-LSDWSTEQDTL 2642
Query: 96 GAHVRS 101
+S
Sbjct: 2643 EKATKS 2648
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 99 VRSHTGE----RLIACYHCGQHFANNRKLRDHLRRQNVDPESPFKCTMCGI 145
+R+HTG+ RL CY CG+ N R+ + +R Q + C CG+
Sbjct: 1791 IRAHTGKACPVRLSTCYKCGKADHNLRECKLRIRFQGL-------CLFCGL 1834
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 99 VRSHTGE----RLIACYHCGQHFANNRKLRDHLRRQNVDPESPFKCTMCGI 145
+R+HTG+ RL CY CG+ N R+ + +R Q + C CG+
Sbjct: 1791 IRAHTGKACPVRLSTCYKCGKADHNLRECKLRIRFQGL-------CLFCGL 1834
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 156 HARQHVSAHVCALCDMTATSPAALAQHVRYRHLPRAPHHA-CTRCAYR 202
H+ +S+ C+LC T P + +R P + HA CT C R
Sbjct: 432 HSTSLLSSQPCSLCGFNRTQP---LRQFEFRSRPDSTSHASCTYCVAR 476
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 28.3 bits (60), Expect = 2.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 138 FKCTMCGIPCATEYLLNEH 156
F+C C +PC + LL EH
Sbjct: 146 FRCLCCHVPCKNKKLLREH 164
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 85 CGAWFTTKALLGAHVRSHTGERLIACYH-------CGQHFANNRKLRDHLRRQNVDPE 135
C F L H+RSHT E+ C CG+ F+ L H ++ + +P+
Sbjct: 75 CTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQ 132
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.135 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,680,906
Number of Sequences: 5004
Number of extensions: 64518
Number of successful extensions: 270
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 230
Number of HSP's gapped (non-prelim): 38
length of query: 400
length of database: 2,362,478
effective HSP length: 74
effective length of query: 326
effective length of database: 1,992,182
effective search space: 649451332
effective search space used: 649451332
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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