Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001602-TA|BGIBMGA001602-PA|IPR007087|Zinc finger,
C2H2-type
(400 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 63 4e-10
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 61 2e-09
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 52 8e-07
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 49 8e-06
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 47 2e-05
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 44 3e-04
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 39 0.008
03_06_0478 + 34214412-34214846 38 0.011
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 37 0.025
11_04_0142 + 14027726-14029081 34 0.23
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 32 0.70
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 31 1.6
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 31 2.1
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 30 2.8
03_04_0188 - 18241815-18242477 29 5.0
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 29 6.6
09_02_0366 + 7941550-7942161,7942230-7942775 29 8.7
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 62.9 bits (146), Expect = 4e-10
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 9 AYHGKLLAIGLNGRATLKLERCKKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHA 68
A G L ++G + + LK ++ + P +C + C + F L HA
Sbjct: 5 AVAGCLNSMGEDRLSALKSRDKEQEAELAKPEPTTEVLFLCSYEGCGKTFVDAGALRKHA 64
Query: 69 KLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYH--CGQ--HFANNRKLR 124
HV+ +++C +AGC F + L H HTGE+ C H CG+ F+ + L+
Sbjct: 65 --HVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLK 122
Query: 125 DHLRRQNVDPESPFKCTMCGIPCATEYLLNEHARQHVSAHVCALCDMTATSPAALAQHVR 184
H++ +VD K C E L H +Q +AT+ + LA H
Sbjct: 123 AHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEKGGLQNPGGSATNRSGLADHSH 182
Query: 185 YRHLPR 190
H P+
Sbjct: 183 NSHTPK 188
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 60.9 bits (141), Expect = 2e-09
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 48 ICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERL 107
+C + +C + F + L HA HV+ +++C GCG F + L H HTG++
Sbjct: 88 LCSYENCGKTFVDVAALRKHA--HVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKD 145
Query: 108 IACYH--CGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLNEHARQH 160
C H CG+ F+ + LR HL+ ++ CG ++ L H + H
Sbjct: 146 FICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 46 EHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGE 105
++IC C +KF L H +H + F+C GCG F+ L +H+++H E
Sbjct: 115 QYICQEPGCGKKFVDSSKLKRHHLIHTGQKD-FICPHPGCGKAFSLDFNLRSHLKTHALE 173
Query: 106 RLIACYH--CGQHFANNRKLRDHLR 128
C CG+ F ++ KL+ H++
Sbjct: 174 NYHVCPFPACGKRFTSDSKLKSHVK 198
Score = 50.0 bits (114), Expect = 3e-06
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Query: 78 FLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYH--CGQHFANNRKLRDHLRRQNVDPE 135
FLCS+ CG F A L H H ER C CG+ F ++ KL+ H +
Sbjct: 87 FLCSYENCGKTFVDVAALRKHAHVH-NERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKD 145
Query: 136 SPFKCTMCGIPCATEYLLNEHARQHV--SAHVCAL--CDMTATSPAALAQHVR 184
CG + ++ L H + H + HVC C TS + L HV+
Sbjct: 146 FICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVK 198
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 52.0 bits (119), Expect = 8e-07
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 27 LERCKKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCG 86
+E C + + L +L IC C +KF S + L H K+H + C W GC
Sbjct: 1090 IEGCSMSFRTKRDL-SLHKSDICPVKGCGKKFFSHKYLLQHRKVHTD-DRPLTCPWKGCN 1147
Query: 87 AWFTTKALLGAHVRSHTGERLIACYH--CGQHFANNRKLRDHLRR 129
F H+R HTG+R C+ C Q F H R+
Sbjct: 1148 MAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHKRK 1192
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 48.8 bits (111), Expect = 8e-06
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 27 LERCKKN-STKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGC 85
+E C + ST+++ L L IC C +KF + L H K+H++ C+W GC
Sbjct: 1234 IEGCDMSFSTQQDLL--LHKRDICPVKGCKKKFFCHKYLLQHRKVHID-ERPLKCTWKGC 1290
Query: 86 GAWFTTKALLGAHVRSHTGERLIACYH--CGQHFANNRKLRDHLRR 129
F H+R HTG R C CGQ F H R+
Sbjct: 1291 KKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRHKRK 1336
Score = 31.9 bits (69), Expect = 0.93
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 73 NYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNV 132
N KF C GC F+T+ L H R + C + F ++ L H R+ ++
Sbjct: 1225 NKVAKFPCDIEGCDMSFSTQQDLLLHKRD-----ICPVKGCKKKFFCHKYLLQH-RKVHI 1278
Query: 133 DPESPFKCTMCGIPCATE--YLLNEHARQH 160
D E P KCT G A + + EH R H
Sbjct: 1279 D-ERPLKCTWKGCKKAFKWPWARTEHMRVH 1307
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 47 HICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGER 106
+IC C ++F+S + L H +H + F C W GC F H+R HTGER
Sbjct: 817 NICTDESCGKRFSSHKYLKRHQCVHRD-ERPFKCPWDGCPMTFKWLWAQTEHIRVHTGER 875
Query: 107 LIACY--HCGQHFANNRKLRDHLRRQN 131
C CGQ F H ++ N
Sbjct: 876 PYKCSAPDCGQSFRYVSDYSRHRKKFN 902
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 76 EKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPE 135
E F C C F TKA L AH R+ + CG+ F++++ L+ H E
Sbjct: 792 EAFQCDIEFCDMTFETKAELRAHQRN-----ICTDESCGKRFSSHKYLKRHQCVHR--DE 844
Query: 136 SPFKCTMCGIPCATEYL--LNEHARQH 160
PFKC G P ++L EH R H
Sbjct: 845 RPFKCPWDGCPMTFKWLWAQTEHIRVH 871
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 22 RATLKLERCKKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCS 81
R +++ C+ R +L ++ ++ C C R F S + L H +H N + C
Sbjct: 539 RFQCEIDYCRMTFKNRAEL-SVHKKNTCTVKSCGRHFRSHKYLRRHQSIH-NDDMPYKCP 596
Query: 82 WAGCGAWFTTKALLGAHVRSHTGERLIAC 110
W GC F G H + H G+R C
Sbjct: 597 WEGCSMAFKWSWDRGEHFQVHAGKRPYKC 625
Score = 33.5 bits (73), Expect = 0.30
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 75 SEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDP 134
+++F C C F +A L H ++ + CG+HF +++ LR H N D
Sbjct: 537 AKRFQCEIDYCRMTFKNRAELSVHKKNTCTVK-----SCGRHFRSHKYLRRHQSIHNDD- 590
Query: 135 ESPFKCTMCGIPCATEYLLNEHARQHVSAH 164
P+KC G C+ + + +H H
Sbjct: 591 -MPYKCPWEG--CSMAFKWSWDRGEHFQVH 617
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 38.7 bits (86), Expect = 0.008
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 85 CGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPESP-FKCTMC 143
CGA F A L H++SH+ ER C F+ RK DHL R + + F C+M
Sbjct: 65 CGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRK--DHLNRHMLKHQGKLFTCSMD 122
Query: 144 GIPCATEYLLNEHARQHV 161
G C ++ + + ++HV
Sbjct: 123 G--CGRKFSIKANMQRHV 138
Score = 35.5 bits (78), Expect = 0.075
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 48 ICMWTDCNRKFNSIQILFDHAKLHV--NYSEKFLCSWAGCGAWFTTKALLGAHVRS-HTG 104
IC DC + I DH H+ + + F CS GCG F+ KA + HV+ H
Sbjct: 89 ICPLEDCPFSY----IRKDHLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHED 144
Query: 105 E------RLIACYH--CGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLNEH 156
E R C C + F K++ H +V + + C C + E
Sbjct: 145 ETATKSNRQFVCKEEGCNKVFKYASKMKKH-EESHVKLDY-VEVVCCEPGCMKTFTNVEC 202
Query: 157 ARQHVSA-HVCALCDMTATS--PAALAQHVR-YRHLPRAPHHACT--RCAYRAVTKNDLQ 210
R H A H CD+ + +H+R + +P C+ C K++L
Sbjct: 203 LRAHNQACHQYVQCDICGEKHLKKNIKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLT 262
Query: 211 KHL 213
KH+
Sbjct: 263 KHI 265
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 151 YLLNEHARQHVSAHVCALCDMTATSPAALAQHVRYRHLPRAPHHACTRCAYRAVTKNDLQ 210
Y N H H C C + PA L QH++ R+ C + + K+ L
Sbjct: 47 YKSNGEKVVHEGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLN 106
Query: 211 KHLMIH 216
+H++ H
Sbjct: 107 RHMLKH 112
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 67 HAKLH--VNYSEKFLCSWAGCGAWFTTKALLGAHVR-SHTGERLIACYHCG 114
H + H V +E+ CS+ GC F+ K+ L H++ SH + AC G
Sbjct: 231 HLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTG 281
>03_06_0478 + 34214412-34214846
Length = 144
Score = 38.3 bits (85), Expect = 0.011
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Query: 8 HAYHGKLLAIGLNGRATLKLERCKKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDH 67
H G+++++ L+ + ++ +R P + C+R F S Q L H
Sbjct: 4 HPRDGEVISLSLSLTLGAAADSGERKKPRRGSSPAASGSGDFVCKTCSRAFPSFQALGGH 63
Query: 68 AKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHL 127
H+ A A TTK + + T E C+ CGQ F + L H+
Sbjct: 64 RTSHLRGRHGLALGLAAATAKETTKKVQEKPAAAATHE----CHICGQGFEMGQALGGHM 119
Query: 128 RR 129
RR
Sbjct: 120 RR 121
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 37.1 bits (82), Expect = 0.025
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 21/173 (12%)
Query: 59 NSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERLIAC--YHCGQH 116
+S + L +H + F C GC ++ K L H+ +H G +L AC C +
Sbjct: 268 DSPEKLHQECLVHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTHQG-KLFACPMEGCNRK 326
Query: 117 FANNRKLRDHLRRQNVD-----PESPFKC--TMCGIPCATEYLLNEHARQHV----SAHV 165
F ++ H++ + D + F C CG L +H HV S +
Sbjct: 327 FTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVI 386
Query: 166 CAL--CDMTATSPAALAQHVRYRHLPRAPHHACTRCAYRAVTKNDLQKHLMIH 216
C C T+ L H + H H C C + + KN ++H +H
Sbjct: 387 CCEPGCMKAFTNLECLKAHNKSCH----RHVVCDVCGTKQLKKN-FKRHQRMH 434
Score = 37.1 bits (82), Expect = 0.025
Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 26/200 (13%)
Query: 31 KKNSTKRNQLPNLPNEHICMWTDCNRKFNSIQILFDHA-KLHVNYS-----EKFLCSWAG 84
+K+ R+ L + C CNRKF + H ++H + S ++F+C
Sbjct: 300 RKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEEN 359
Query: 85 CGAWFTTKALLGAHVRSHTG---ERLIACY-HCGQHFANNRKLRDHLRRQNVDPESPFKC 140
CG F + L H SH +I C C + F N L+ H N C
Sbjct: 360 CGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAH----NKSCHRHVVC 415
Query: 141 TMCGIPCATEYLLNEHARQHVSAHV-----CAL--CDMTATSPAALAQHVRYRHLPRAPH 193
+CG + H R H + V C L C ++ + + L +HV+ H + P
Sbjct: 416 DVCGTK-QLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPF 474
Query: 194 HACTRCAYRAVTKNDLQKHL 213
C + K+ KH+
Sbjct: 475 ----VCGFSGCGKSFSYKHV 490
Score = 33.5 bits (73), Expect = 0.30
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 49 CMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRS 101
C DC F+ L H K F+C ++GCG F+ K + H +S
Sbjct: 445 CHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYKHVRDNHEKS 497
>11_04_0142 + 14027726-14029081
Length = 451
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 78 FLCSWAGCGAWFTTKALLGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPESP 137
++C GCG F T LG H H A + ++ D S
Sbjct: 222 YMCKMQGCGRAFPTHQGLGGHAAGHQNRSKAAAAAASEQGSSGAGADG--CHGGAD-SSK 278
Query: 138 FKCTMCGIPCATEYLLNEHARQH 160
+C CG+ T + L H R+H
Sbjct: 279 HRCRECGMEWKTGFALGGHMRKH 301
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 32.3 bits (70), Expect = 0.70
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 95 LGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLN 154
L H R G R AC C + FA +R R + ++C CG + LN
Sbjct: 235 LQTHYRRRHGARDFACRRCAKRFA----VRGDWRTHEKNCGRLWRCA-CGAHFRHKRSLN 289
Query: 155 EHARQHVSAHVCA 167
+HAR +AH A
Sbjct: 290 DHARAFGAAHAHA 302
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 48 ICMWTDCNRKFNSIQILFDHAKLHVNYSEKFLCSWAGCGAWFTTKALLGAHVRSHTGERL 107
+C++ C+ +F+S LF H + + G + K + VRS E
Sbjct: 56 LCLF--CSARFDSESSLFSHCASEHRFDFYRVVKETGMDFYGCIKLI--NFVRSKVAEN- 110
Query: 108 IACYHCGQHFANNRKLRDHL 127
C+ CGQ F++N +L HL
Sbjct: 111 -KCWSCGQVFSSNSELCGHL 129
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 140 CTMCGIPCATEYLLNEH--ARQH---VSAHV------CALCDMTATSPAALAQH-VRYRH 187
C +C + C T + L EH R+H V+++ C LCD+ S +AQH +H
Sbjct: 193 CGVCNVKCMTRFNLREHEAGRKHRDKVASNAGEKNVRCQLCDVLLASELNVAQHYAGKQH 252
Query: 188 LPR 190
L R
Sbjct: 253 LHR 255
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 153 LNEHARQHVSAHVCALCDMTATSPAALAQH 182
L + R S+ C+LC +T TSP AL +H
Sbjct: 302 LAKKPRSQGSSITCSLCKVTMTSPRALVEH 331
>03_04_0188 - 18241815-18242477
Length = 220
Score = 29.5 bits (63), Expect = 5.0
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Query: 85 CGAWFTTKALLGAHVRSHT-----GERLIACYHCGQHFANNRKLRDHLRRQNVDPESPFK 139
CG F + LG H SH G+ A Q A+ ++ P +
Sbjct: 78 CGKAFASYQALGGHKSSHRKPPSPGDHYGAAA-AAQQLASAGDSKEDSASSAAGSTGPHR 136
Query: 140 CTMCGIPCATEYLLNEHARQHVSAHVCALCDMTATSPAA 178
CT+C AT L H R H ++A++ AA
Sbjct: 137 CTICRRSFATGQALGGHKRCHYWDGTSVSVSVSASASAA 175
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 166 CALCDMTATSPAALAQHVR-YRHLPRAPH 193
CALC ++ATS AL +H+ RH + H
Sbjct: 255 CALCQVSATSEGALNEHLEGKRHKAKLAH 283
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 95 LGAHVRSHTGERLIACYHCGQHFANNRKLRDHLRRQNVDPESPFKCTMCGIPCATEYLLN 154
L H R G R AC CG+ FA +R R + + C +CG + L
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFA----VRGDWRTHEKNCGKLWFC-VCGSDFKHKRSLK 320
Query: 155 EHARQHVSAHVCALCDMTAT 174
+H R H + + ++T
Sbjct: 321 DHVRSFGGGHAPHIVESSST 340
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.135 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,806,807
Number of Sequences: 37544
Number of extensions: 410759
Number of successful extensions: 1268
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1202
Number of HSP's gapped (non-prelim): 48
length of query: 400
length of database: 14,793,348
effective HSP length: 84
effective length of query: 316
effective length of database: 11,639,652
effective search space: 3678130032
effective search space used: 3678130032
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
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