Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001601-TA|BGIBMGA001601-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(315 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 58 2e-09
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 48 1e-06
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 44 3e-05
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 44 3e-05
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 43 7e-05
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 42 9e-05
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 41 2e-04
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 39 0.001
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 34 0.023
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.28
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 29 1.1
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 28 2.0
SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine decarboxylase|Schizo... 27 2.6
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 27 2.6
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 27 2.6
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 4.6
SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr 2... 27 4.6
SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 26 6.1
SPAC3A11.10c |||dipeptidyl aminopeptidase |Schizosaccharomyces p... 26 6.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 26 8.0
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 26 8.0
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 143 SYLNYIVVLVIEAPANVCKLIFLD-RFGRKRVIAVAFLMTGLILINYGFVPSGNWSILLY 201
+Y N ++V I P ++ + ++ R GRK + ++ ++TG+ L + N +
Sbjct: 408 TYRNSLIVSAIGVPGSLIAGVLVEFRIGRKGTLCLSLILTGVFLFASTTAKTSNAYLGWN 467
Query: 202 LGGKFFITLAYNSLYVFAAEVFPTNYRTTLMAMCSTLGRTGSTVAPQTPLLTRYYEYLPT 261
FF + Y LY + EVFP+ R T + + ++ R +P + P
Sbjct: 468 CTFSFFSDIMYGVLYAYTPEVFPSKVRGTAVGLAASANRILGIFSPVIAMRANLTTSAPI 527
Query: 262 LLFGSMAAISGILVLTLP 279
+ G++ +GILV+ P
Sbjct: 528 FVSGALFIFAGILVVFFP 545
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 48.4 bits (110), Expect = 1e-06
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 42/265 (15%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGL--YNEGLDVLAKSERLNKVFVPKDHY 76
WR + + PA+LV + T+ ES + SK L Y + +A + K
Sbjct: 229 WRLQMGLALVPALLVLIPRLTMKESKSYEQSKALNKYTDNDTYIADDDEPKKDNQNVVEE 288
Query: 77 EQV------EKHATKQRD--DRKCESM--ARNQSTFKQLLSSKIIWKRLFTCSFLWTSST 126
+Q+ + H T D D++ ++ + N S F + S +K L + W
Sbjct: 289 KQINLTTSSDSHPTSTEDFGDKRASTVPTSENTSGFIEYFSQWHHFKHLLATAVSWFLLD 348
Query: 127 LVYYGLSIN------AIELSG--NSYL--------NYIVVLVIEAPANVCKLIFLDRFGR 170
+ +YG+++N AI S N Y N I+ + P + +++ GR
Sbjct: 349 IAFYGVNLNQSVILKAIGFSSGKNEYHTLMRGAIGNLIIAIAGYVPGYWFTVFLVEKLGR 408
Query: 171 KRVIAVAFLMTGLILINYGFVPSGNWSILLYLGGKF--FITLAYNS-------LYVFAAE 221
K + +TGL+ + +G+W + GG+F F+ + S +++ AE
Sbjct: 409 KWIQLQGLFITGLMFA----ILAGSWDTIS-TGGRFACFVIAQFFSNFGPNATTFLYPAE 463
Query: 222 VFPTNYRTTLMAMCSTLGRTGSTVA 246
VFP R T + + LG+ G+ +A
Sbjct: 464 VFPARVRGTAHGLSAALGKCGAILA 488
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 44.0 bits (99), Expect = 3e-05
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 102 FKQLLSSKIIWKRLFTCSF---LWTSSTLVYYGLSINAIE---LSGNSYLNYIVVLVIEA 155
FK LL + + W L + L S L G S E L N+ N I+ +
Sbjct: 345 FKHLLGTSVCWFLLDIAFYGVNLNQSVILKNIGFSTGTNEYRTLMKNAIGNLIIAVAGYV 404
Query: 156 PANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFVPSGNWSILLYLGGKF--------F 207
P + ++ GRK + F++TGL+ + +G W+ + GG+F F
Sbjct: 405 PGYWFNVFLVEILGRKWIQLQGFVITGLMFA----ILAGRWNEIS-TGGRFACFVIAQLF 459
Query: 208 ITLAYNSL-YVFAAEVFPTNYRTTLMAMCSTLGRTGSTVAPQT-PLLTRYYEYLPTLLFG 265
NS +++ AEVFP R T + + LG+ G+ +A LT Y +
Sbjct: 460 SNFGPNSTTFIYPAEVFPARVRGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMWIF 519
Query: 266 SMAAISGIL-VLTLPETNNQ 284
GIL L LPET +
Sbjct: 520 CGCMWGGILFTLLLPETKGR 539
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 44.0 bits (99), Expect = 3e-05
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 102 FKQLLSSKIIWKRLFTCSF---LWTSSTLVYYGLSINAIE---LSGNSYLNYIVVLVIEA 155
FK LL + + W L + L S L G S E L N+ N I+ +
Sbjct: 346 FKHLLGTSVCWFLLDIAFYGVNLNQSVILKNIGFSSGTNEYRTLMKNAIGNLIIAVAGYV 405
Query: 156 PANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFVPSGNWSILLYLGGKF--------F 207
P + ++ GRK + F++TGL+ + +G W+ + GG+F F
Sbjct: 406 PGYWFNVFLVEILGRKWIQLQGFVITGLMFA----ILAGRWNEIS-TGGRFACFVIAQLF 460
Query: 208 ITLAYNSL-YVFAAEVFPTNYRTTLMAMCSTLGRTGSTVAPQT-PLLTRYYEYLPTLLFG 265
NS +++ AEVFP R T + + LG+ G+ +A LT Y +
Sbjct: 461 SNFGPNSTTFIYPAEVFPARVRGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMWIF 520
Query: 266 SMAAISGIL-VLTLPETNNQ 284
GIL L LPET +
Sbjct: 521 CGCMWGGILFTLLLPETKGR 540
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 42.7 bits (96), Expect = 7e-05
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 31/241 (12%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDH-YE 77
WR + I +++F+ I L ES R+L + G E LD++ K N V +P++H
Sbjct: 178 WRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKDEEALDIMCK----NNV-LPREHEII 232
Query: 78 QVEKHATKQRDDRKCES-MARNQSTFKQLLSSKIIWKR-----LFTCSFLWTSSTLVYYG 131
Q E H K CE+ MA +T+ +L + I ++ + + L + YYG
Sbjct: 233 QTEYHVIK----TDCEAEMAGGPATWGDILGADIRYRTFLGLGVMSLQQLTGDNYYFYYG 288
Query: 132 LSINAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFV 191
+ + YL+ +++ + L L+ FGR+ + + + + Y V
Sbjct: 289 FEVFEGTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGGVWQSITFFIYAAV 348
Query: 192 -------PSGN-----WSILLYLGGKFFITLAYN---SLYVFAAEVFPTNYRTTLMAMCS 236
+G ++++ F + A + YV E +P YR+ A+ +
Sbjct: 349 GNRALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVAT 408
Query: 237 T 237
T
Sbjct: 409 T 409
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 42.3 bits (95), Expect = 9e-05
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 139 LSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFVPSGNWSI 198
L N+ N I+ + P ++ ++ GRK + FL+ L+ +G V +G W
Sbjct: 398 LQKNAIGNLIIAVAGYIPGYWVSVVLIEVMGRKWIQIQGFLICCLL---FG-VLAGTWET 453
Query: 199 LLYLG-------GKFFITLAYNSL-YVFAAEVFPTNYRTTLMAMCSTLGRTGSTV-APQT 249
+ G +FF N+ +V AEVFP+ R +C+ G+ G+ + A
Sbjct: 454 ISTGGRFACVALAQFFFNFGPNTTCFVIPAEVFPSRVRAFSHGICAACGKAGAILSALLF 513
Query: 250 PLLTRYYEY--LPTLLFGSMAAISGILVLTLPETNNQ 284
LT + + + FG M A ++ L LPET N+
Sbjct: 514 NKLTEVIGFGNVLWIFFGCMVA-GAVVTLILPETANR 549
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 41.1 bits (92), Expect = 2e-04
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 31/241 (12%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDH-YE 77
WR + I ++ F+ I L ES R+L S G E L ++AK+ L P +H
Sbjct: 178 WRVSMGINLLWGIITFIGISFLPESPRYLISVGRDEEALQIMAKNNDL-----PIEHEVI 232
Query: 78 QVEKHATKQRDDRKCES-MARNQSTFKQLLSSKIIWKR-----LFTCSFLWTSSTLVYYG 131
Q E H K CE+ +A +T+ ++ I ++ + + L + YYG
Sbjct: 233 QTEYHVIKS----DCEAELAGGPATWPEIFGPDIRYRTFLGLGVMSLQQLTGDNYYFYYG 288
Query: 132 LSINAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFV 191
+ + YL+ +++ + L L+ FGR+ + + L + Y V
Sbjct: 289 FEVFEGTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGALWQSITFFIYAAV 348
Query: 192 -------PSGN-----WSILLYLGGKFFITLAYN---SLYVFAAEVFPTNYRTTLMAMCS 236
+G ++++ F + A + YV E +P YR+ A+ +
Sbjct: 349 GNRALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVAT 408
Query: 237 T 237
T
Sbjct: 409 T 409
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 38.7 bits (86), Expect = 0.001
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 12/180 (6%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDHYEQ 78
WR + I ++ + I L ES R+L G E + VL++S L P Q
Sbjct: 182 WRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAEL----FPDSEEVQ 237
Query: 79 VEKHATKQRDDRKCESMARNQSTFKQLLSSKIIWKR---LFTCSF--LWTSSTLVYYGLS 133
E H K D E A ++ + I ++ +F S L ++ YYG S
Sbjct: 238 NEYHRLKSSID---EEFAGGPCSWASIFGKDIRYRTFLGMFVMSLQQLTGNNYFFYYGFS 294
Query: 134 INAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFVPS 193
+ + YL+ +++ + + L+RFGR+ + + + + Y V S
Sbjct: 295 VMQGAGINSPYLSAMILDAVNFGCTFGGMYVLERFGRRNPLIIGGIWQSICFFIYSAVGS 354
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 34.3 bits (75), Expect = 0.023
Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 27/238 (11%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDHYEQ 78
WR + I +L+F + L ES R+L KG E + +L ++ L P DH
Sbjct: 180 WRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEECMKILTRNAGL-----PADHPIM 234
Query: 79 VEKHATKQRDDRKCESMARNQSTFKQLLSSKIIWKRLF---TCSF--LWTSSTLVYYGLS 133
+++ Q D +A ++ Q+ S++I ++ L +F L ++ YYG
Sbjct: 235 QKEYNAIQADVE--AELAGGPCSWPQIFSNEIRYRTLLGMGVMAFQQLTGNNYFFYYGTQ 292
Query: 134 INAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFV-- 191
+ + +L +++ + + L+ FGR+ + V + + Y V
Sbjct: 293 VFRGTGLNSPFLAALILDAVNFGCTFGAIFVLEYFGRRGPLIVGGVWQSICFFIYASVGD 352
Query: 192 -----PSGN-----WSILLYLGGKFFITLAYN---SLYVFAAEVFPTNYRTTLMAMCS 236
P+G ++++ F + A + YV E +P YR+ A+ +
Sbjct: 353 RALTRPNGTSNHRAGAVMIVFSCLFIFSFAQTWAPAAYVIVGESYPIRYRSKCAAVAT 410
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 30.7 bits (66), Expect = 0.28
Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 35/300 (11%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERL-NKVFVPKDHYE 77
WR + I ++ V + L+ES R+L S G +E + V+ K+ L + + Y+
Sbjct: 178 WRVSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAELPPDSDIIQTEYK 237
Query: 78 QVEKHATKQRDDRKC--ESMARNQSTFKQLLSSKII-WKRLFTCSFLWTSSTLVYYGLSI 134
Q++ + C + + ++ L I+ + +L C++ + T V+ G +
Sbjct: 238 QIKSDCEAAVEGGPCTWPEIFGKEIRYRTFLGMAIMSFNQLTGCNYYFYYGTQVFKGTGM 297
Query: 135 NAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFV--- 191
+ YL +++ + L L+ GR+ + + + + Y V
Sbjct: 298 E------SPYLASLILDAVNFGCTFGGLFVLEYCGRRVPLIIGGVWQSICFFIYAAVGNR 351
Query: 192 ----PSGN-----WSILLYLGGKFFITLAYN---SLYVFAAEVFPTNYRTTLMAMCSTLG 239
+G ++++ F + A + YV E +P YR+ A+ +T
Sbjct: 352 ALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTSN 411
Query: 240 RTGS-TVAPQTPLLTRYYEYLPTLLFGSMAAISGILV---------LTLPETNNQKLPDS 289
+ ++ TP +T + +F S + I+ LTL E N L D+
Sbjct: 412 WLWNFLISFFTPFITNSIGFKYGYIFASCNLCASIVTFLFAHESKGLTLEEINELYLSDA 471
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 135 NAIELSGNSYLNYIVVLVIEAPAN----VCKLIFLDRFGRKRVI--AVAFLMTGLIL--I 186
+AI + N I V ++ N + +F+DR GR+R++ A ++ GL L I
Sbjct: 355 SAIIFQSVGFKNSISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAI 414
Query: 187 NYGFVPS 193
Y F+P+
Sbjct: 415 AYHFLPA 421
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 19 WRYLLFIIYTPAVL-VFVYIWTLTESFRWLFSKGLYNEGLDVLAK 62
WR+++ + PA +F+ IW L ES R L K E + LA+
Sbjct: 246 WRWMVGLAMVPAAFQLFILIW-LPESPRLLVKKERSQEAYNTLAR 289
>SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine
decarboxylase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 437
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 121 LWTSSTLVYYGLSINAIELSGNSYLNYIVVLVIEAPAN 158
++TSS+ + +G + + GN L VVLV EAPA+
Sbjct: 375 VYTSSSSILHGHPLLRGDEVGNFELGSTVVLVFEAPAD 412
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 227 YRTTLMAMCSTLGRTGSTVAPQTPLLTRYYEYLPTL-LFGSMAAISGILVLTLPET 281
Y++T CST +T S + P T +Y+ + LF MA + I + T P++
Sbjct: 486 YQSTCFVRCSTGQKTFSDLKTVLPTATLAADYISMIVLFRLMANFTKISLQTFPKS 541
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 27.5 bits (58), Expect = 2.6
Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 31/293 (10%)
Query: 19 WRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDH-YE 77
WR + I ++ V I L ES R+L + G +E L ++ + L P +H
Sbjct: 148 WRISIGINLLWGIITLVGIIFLPESPRYLIAIGKDDEALKIMCYNNDL-----PLEHEII 202
Query: 78 QVEKHATKQRDDRKCESMARNQSTFKQLLSSKIIWKRLFTCSF-----LWTSSTLVYYGL 132
Q E H K D + +A + + ++ ++ I ++ + L ++ YYG
Sbjct: 203 QTEYHTIKSDCDAE---LAGGPARWPEIFNANIRYRTFLGMAVMMFQQLTGANYYFYYGT 259
Query: 133 SINAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFV- 191
+ + YL ++ + + L+ FGR+ + V + + Y V
Sbjct: 260 QVFRGTGMDSPYLAALIPDAVNCGCTFGAIFVLEFFGRRSPLIVGGIWQYICFFIYAAVG 319
Query: 192 ------PSGN-----WSILLYLGGKFFITLAYN---SLYVFAAEVFPTNYRTTLMAMCST 237
+G ++++ F + + + YV E +P YR+ A+ ++
Sbjct: 320 DRALYHKNGTSNHRAGAVMIVFSCLFIFSFSQTWAPAAYVIVGESYPVRYRSKCAAVATS 379
Query: 238 LGRTGS-TVAPQTPLLTRYYEYLPTLLFGSMAAI-SGILVLTLPETNNQKLPD 288
+ ++ TP +T + +F S + I+ L + ET + L +
Sbjct: 380 ANWFWNFLISFFTPFITNSIGFKYGYIFASCNLTGAAIIFLFVHETKGRTLEE 432
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 119 SFLWTSSTLVYYGLSINAIELSGNSYLNYIVVLVI 153
SFL ST V L++ ++ NSY+N++ V +
Sbjct: 499 SFLVAYSTFVSSALAVELLKFCLNSYVNFVSVCTL 533
>SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr
2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 71 VPKDHYEQVEKHATKQRDDRKCESMARNQSTFKQLLSSKIIWKRLFT 117
+P+D +Q+ TK+ DD E+ RN +LL + L T
Sbjct: 266 IPQDVLKQIRLILTKKEDDADAENHRRNVHWITKLLGEAALANDLST 312
>SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 629
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 210 LAYNSLYVFAAEVFPTNYRTTLMAMCSTLGRTGSTVAPQTPLLTR 254
+A N F + FP++Y ++L T G + ++ PQ L R
Sbjct: 15 VAQNPFLTFDQDSFPSSYGSSLNVSEQTSGSSSTSPLPQISCLLR 59
>SPAC3A11.10c |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 170 RKRVIAVAFLMTGLILINYGFVPSGNW 196
R+R++ V L+ LIL G++ G W
Sbjct: 20 RRRILKVHLLIAALILSAVGYLGKGKW 46
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 252 LTRYYEYLPTLLFGSMAAISGILVLTLPETNNQKLPDSLK 291
+T+ Y +L L+ + +AIS I VLT+ + L SLK
Sbjct: 893 ITQKYRFLE-LITSTWSAISSIHVLTITNDRDMDLEHSLK 931
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 192 PSGNWSILLYLGGKFFITLAYNSLYVFAAEVFPTNY 227
P G + I+L L G F Y SLY F +F + Y
Sbjct: 429 PVGPYIIIL-LNGVFLFLQGYKSLYPFRLSLFVSYY 463
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.138 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,406,068
Number of Sequences: 5004
Number of extensions: 58959
Number of successful extensions: 249
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 218
Number of HSP's gapped (non-prelim): 30
length of query: 315
length of database: 2,362,478
effective HSP length: 73
effective length of query: 242
effective length of database: 1,997,186
effective search space: 483319012
effective search space used: 483319012
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)
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