GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001600-TA|BGIBMGA001600-PA|IPR005829|Sugar transporter
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (449 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   7.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   7.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 211 FIVELVGLKQRVIVSAMCNMT-FVIGVVLIALLAWAVNNWR 250
           F+  L  LK R I   +  +  FVI V+ +  L +AV  WR
Sbjct: 83  FLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAVYYWR 123


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 393 LSYYHKSMPTVIFGAMCFISSTLVMML 419
           L++Y +   TV     C+++S LV+ML
Sbjct: 522 LAHYLRVFFTVFNVVHCYLASELVLML 548


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 254 LILYCPATIVFVYVW 268
           +ILY  AT+   YVW
Sbjct: 143 VILYILATVFLAYVW 157


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 254 LILYCPATIVFVYVW 268
           +ILY  AT+   YVW
Sbjct: 143 VILYILATVFLAYVW 157


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,122
Number of Sequences: 317
Number of extensions: 4468
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 5
length of query: 449
length of database: 114,650
effective HSP length: 59
effective length of query: 390
effective length of database: 95,947
effective search space: 37419330
effective search space used: 37419330
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)