GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001600-TA|BGIBMGA001600-PA|IPR005829|Sugar transporter
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (449 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   3.2  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   4.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   9.7  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 265 VYVWFMNESARWLLSKGRRDEAIDVLKRAAKINNL 299
           V VWF N  A+W   K    E     +  +KI  L
Sbjct: 231 VEVWFKNRRAKWRKQKREEQEQFSNYEINSKIRKL 265


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 42  ECGFIFEAQE----QNYRCEVDGCELRFNDTSWLQYAIPLDVEKQRPQ 85
           EC  +F  Q+    Q+   E+  C   FN ++W  Y    + EK R +
Sbjct: 259 ECRGLFSPQKFVCHQHEPQEIRTCHWGFNSSNWRSYIHVAESEKNREE 306


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 418  MLPETRNMRLPDTIEE 433
            M P T  +RLPDT+++
Sbjct: 1401 MTPGTERIRLPDTVDQ 1416


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,580
Number of Sequences: 2123
Number of extensions: 17587
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 3
length of query: 449
length of database: 516,269
effective HSP length: 66
effective length of query: 383
effective length of database: 376,151
effective search space: 144065833
effective search space used: 144065833
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 49 (23.8 bits)