GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001600-TA|BGIBMGA001600-PA|IPR005829|Sugar transporter
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (449 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          24   3.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   3.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   6.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   6.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   9.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   9.1  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 311 DPLLKPQNQTGDKKSQMYKAIRSADYWSIP 340
           DP LK +  TGD+K  +Y  I+    WS P
Sbjct: 22  DPFLK-RLITGDEKWVVYNNIKRKRSWSRP 50


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 311 DPLLKPQNQTGDKKSQMYKAIRSADYWSIP 340
           DP LK +  TGD+K  +Y  I+    WS P
Sbjct: 143 DPFLK-RLITGDEKWVVYNNIKRKRSWSRP 171


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 222 VIVSAMCNMTFVIGVVLIALLAWAVNNWR--TYILILYCPATIVFVYVWFMNESARWLLS 279
           +IV A+ N+  V+G VL+ L  +  +  R  T + I+      + V +  +  SA W + 
Sbjct: 69  LIVLAIVNVMVVLGNVLVILAVYHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVF 128

Query: 280 K 280
           K
Sbjct: 129 K 129


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 273 SARWLLSKGRRDEAIDVLKRAAK 295
           S +W+   G R++ ID++ R  K
Sbjct: 84  SYKWITRSGTREQFIDMVARCNK 106


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 413 STLVMMLPETRNMRLPDTIEEAEHL 437
           S  V+  P+T+ M+LP   E   HL
Sbjct: 143 SVAVIHRPDTKLMKLPPMYEVMPHL 167


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 229 NMTFVIGVVLIALLAWAVNNWRTYILILY 257
           NM FV+G+  +A        W+ Y   LY
Sbjct: 26  NMVFVVGLERVAEELMGRRRWKQYQDTLY 54



 Score = 22.2 bits (45), Expect = 9.1
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 69   SWLQYAIPLDVEKQRPQSCFMYQQANVTSQQCLPEDFINKTV 110
            S L+  IP D   QR  +    QQ   +SQQ +PE   +K +
Sbjct: 1290 SSLETGIPRD---QRAMTEARNQQQQASSQQQIPESMRSKAL 1328


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,669
Number of Sequences: 429
Number of extensions: 4993
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 449
length of database: 140,377
effective HSP length: 60
effective length of query: 389
effective length of database: 114,637
effective search space: 44593793
effective search space used: 44593793
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)