GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001598-TA|BGIBMGA001598-PA|IPR007110|Immunoglobulin-
like, IPR013151|Immunoglobulin, IPR003599|Immunoglobulin subtype,
IPR003598|Immunoglobulin subtype 2
         (221 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   3.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.2  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 9   ASGDVS-VQELENATLTCKATGHPPPKITWRR---EDHEPIL-LKKPMSRDFDKVENY 61
           A  DVS + +L NA +     GH    I W+    +  +P   L+K ++RDF  +EN+
Sbjct: 82  AKQDVSKIIQLGNA-IKFNGGGHINHSIFWKNLSPDRSDPSAELQKALNRDFQNMENF 138


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 175  IGTYNCVSTNSLGKSEGTLRLYEIKLNSYQEDF 207
            +G  N     +LG+S G ++ YEI  N     F
Sbjct: 2439 VGVLNNHFMTALGRSAGDVQSYEIDANGNHRKF 2471


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 148 PKYTIREEKASYKVSMWLTIRQFSRND 174
           P  T R E      S+W  +RQF R D
Sbjct: 563 PFMTERSELKDRLPSVWYLVRQFDRAD 589


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 148 PKYTIREEKASYKVSMWLTIRQFSRND 174
           P  T R E      S+W  +RQF R D
Sbjct: 564 PFMTERSELKDRLPSVWYLVRQFDRAD 590


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 175  IGTYNCVSTNSLGKSEGTLRLYEIKLNSYQEDF 207
            +G  N     +LG+S G ++ YEI  N     F
Sbjct: 2449 VGVLNHHFMTALGRSAGDVQSYEIDANGNHRMF 2481


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.135    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,907
Number of Sequences: 2123
Number of extensions: 9867
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 221
length of database: 516,269
effective HSP length: 62
effective length of query: 159
effective length of database: 384,643
effective search space: 61158237
effective search space used: 61158237
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)