Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001596-TA|BGIBMGA001596-PA|IPR003736|Phenylacetic acid
degradation-related protein, IPR006683|Thioesterase superfamily
(175 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0279 + 16211180-16211410,16211516-16211659,16212466-162125... 45 4e-05
01_06_1566 + 38283781-38283909,38283985-38284128 39 0.002
03_05_0753 - 27444843-27444995,27446814-27447005,27447099-27447248 35 0.032
07_03_0285 - 16255374-16255460,16255519-16255662,16255772-16256002 34 0.073
05_01_0275 - 2136047-2136202,2137072-2137263,2137345-2137506 32 0.22
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 32 0.22
01_01_0910 + 7175107-7175319,7175448-7175588,7175696-7175866 31 0.52
11_04_0453 - 17886095-17886868,17887928-17888043,17888300-178884... 29 1.6
09_04_0120 + 14836644-14836949,14837038-14837664,14837916-14838359 29 2.7
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 29 2.7
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 28 3.6
05_05_0220 + 23380290-23381581,23381997-23383458 28 4.8
05_01_0254 - 1938343-1938447,1938545-1938700,1939209-1939472,193... 28 4.8
04_04_0035 + 22304934-22305305,22305335-22305904,22306354-22306836 28 4.8
12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403 27 6.3
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 27 6.3
01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847 27 6.3
07_01_0044 - 348439-349539,351979-352301,352418-352550 27 8.4
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 27 8.4
04_04_0193 + 23482177-23484963 27 8.4
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 27 8.4
03_01_0308 + 2431213-2432040 27 8.4
>07_03_0279 +
16211180-16211410,16211516-16211659,16212466-16212597,
16213478-16213591
Length = 206
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 60 SFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTI 119
+ V P+ N +TLHGG +A+V +AV + + + + + ++ +YL ARL +
Sbjct: 69 TLTVSPAAVNGYNTLHGGMVAAVAEAVGMACARAAAGDKEMFLGELSTAYLSAARLNSEV 128
Query: 120 TVESNLLTGGASSVMEVI 137
VE+ +L G S V+ +
Sbjct: 129 EVEAQILRKGRSVVVTTV 146
>01_06_1566 + 38283781-38283909,38283985-38284128
Length = 90
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 74 LHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVESNLLTGGASS- 132
+HGG +AS++D V + + G T + +SYL AR + I +E+ +L G ++
Sbjct: 1 MHGGAVASLVDLVGSAVFFAGGSPKTGVTVEITVSYLDAARANEEIEMEARVLGIGETTG 60
Query: 133 -VMEVILHDGEGAPVAKS-TTSFISGSDK 159
V + G G +A T +++ S K
Sbjct: 61 CVTVEVRRKGAGEVLAHGRITKYLAVSSK 89
>03_05_0753 - 27444843-27444995,27446814-27447005,27447099-27447248
Length = 164
Score = 35.1 bits (77), Expect = 0.032
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 59 GSFVVDPSMCNIGDTLHGGYMASVMDAV-SLYALISRSDGRLGWTTNMNISYLKPARLGD 117
G +V P+ C LHGG A + + + S+ A ++ R+ ++I++ + A LGD
Sbjct: 40 GRLLVTPTCCQPFKVLHGGVSALIAEGLASMGAHMASGYSRVA-GVQLSINHFRSAALGD 98
Query: 118 TITVESNLLTGGASS 132
T+ V + L G S+
Sbjct: 99 TVLVRAAPLHVGRST 113
>07_03_0285 - 16255374-16255460,16255519-16255662,16255772-16256002
Length = 153
Score = 33.9 bits (74), Expect = 0.073
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 60 SFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTI 119
+ V P+ N +TLHGG +A+V + V + + + + + ++ +YL ARL I
Sbjct: 69 TLTVSPAAVNAYNTLHGGMVAAVAEVVGMACARAAAGDKEMFLGELSAAYLSAARLNKKI 128
>05_01_0275 - 2136047-2136202,2137072-2137263,2137345-2137506
Length = 169
Score = 32.3 bits (70), Expect = 0.22
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 52 LTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLK 111
+T G + G +V + C L GG A + +A + S R ++I++++
Sbjct: 37 ITAGEVVGRLLVTATCCQPFKVLGGGVSALMAEAAASIGGYIASGYRRVAGVQLSINHIR 96
Query: 112 PARLGDTITVESN-LLTGGASSVMEV 136
PA LG+T+ ++ + G V EV
Sbjct: 97 PAHLGETVQAKAKPMQLGRTIQVWEV 122
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 6 EALTNPLNIVDKSITLLQPEPEARAWLATTTSAYPILRCRELKTAH 51
E+ T LN+V ++L Q P +L T+AYPI + E T +
Sbjct: 343 ESFTTMLNVVIAGLSLGQAAPNISTFLRARTAAYPIFQMIERNTVN 388
>01_01_0910 + 7175107-7175319,7175448-7175588,7175696-7175866
Length = 174
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 55 GCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPAR 114
G L SF V ++ + H G MA+ +D + A++ +DG +T + +S+ PA
Sbjct: 58 GRLVCSFCVPAAVADADGRWHAGAMAAAVDNLCA-AVVYTADGVHRFTISQAMSFFSPAA 116
Query: 115 LGDTITVESNL 125
G+ + ++ +
Sbjct: 117 HGEEVEMDGRV 127
>11_04_0453 -
17886095-17886868,17887928-17888043,17888300-17888423,
17889734-17889963,17891395-17891452
Length = 433
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 28 ARAWLATTTSAYPILRCRELKTAHLTEGCLK 58
AR W+A +A P L LK +T+GCLK
Sbjct: 33 ARPWVAACVAACPGLEELRLKRMVVTDGCLK 63
>09_04_0120 + 14836644-14836949,14837038-14837664,14837916-14838359
Length = 458
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 78 YMASVMDAVSLYAL-ISRSDGRLGWTTNMNISYLKPARLGDTITVESNL 125
Y +V+ + L+ L S G LGWT I L+ G +ITV NL
Sbjct: 332 YSIAVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 380
>02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 42 LRCRELKTAHLTEGCLKG 59
LRCR++K AHL+E C G
Sbjct: 2133 LRCRQVKAAHLSEQCSCG 2150
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 28.3 bits (60), Expect = 3.6
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 74 LHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVESNL-LTGGASS 132
L GG AS M Y L+ + G+ WT +S P + V + L +TGG
Sbjct: 224 LCGGRDASGMPLSDAYGLLMHTSGQWEWTLAPGVS-PSPRYQHAAVFVGARLHVTGGVLR 282
Query: 133 VMEVILHDGEGAPVAKS--TTSFISGSDKFQKILKDNLDFD 171
I +GEGA A S T +I G + +L D L D
Sbjct: 283 GGRAI--EGEGAIAAASVGTQIYIYGGLRGDILLDDFLVAD 321
>05_05_0220 + 23380290-23381581,23381997-23383458
Length = 917
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 128 GGASSVMEVILHDGEGAPVAKST-TSFISGSDKFQKILK 165
GG +V + +L DG+ + K T +S + D+F++ +K
Sbjct: 642 GGFGTVYKAVLRDGQPVAIKKLTVSSLVKSEDEFKRQVK 680
>05_01_0254 -
1938343-1938447,1938545-1938700,1939209-1939472,
1939563-1939777,1939863-1940672,1941758-1942388
Length = 726
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 58 KGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGD 117
K + ++D M ++ D+ H +S +A + + GW + +++Y+ D
Sbjct: 525 KKTVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAA--LFGWVSRSSLAYVYGL---D 579
Query: 118 TITVESNLLTGGASSVMEVILHDGEGAPVAKS 149
++E L+ GG + +L+DG + + ++
Sbjct: 580 ESSMEDLLIAGGRECPQKRVLNDGHSSEIRRA 611
>04_04_0035 + 22304934-22305305,22305335-22305904,22306354-22306836
Length = 474
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 46 ELKTAHLTEGC-----LKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLG 100
ELK LTEGC +K +VD + + L D L L++ + R G
Sbjct: 204 ELKEVKLTEGCYVMDPVKAVDMVDENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTG 263
Query: 101 WTTNMNI 107
W T +++
Sbjct: 264 WDTPIHV 270
>12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403
Length = 505
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 75 HGGYMASVMDAVSLYALISRSD-GRLG--WTTNMNISYLKPARLGDTITVESNLLTGGAS 131
H ++AS + A +R D G LG W+ + S +K A LG+ ++ S + G+
Sbjct: 371 HEAHLASAEATAATLARSTREDPGSLGEGWSCFLGKSLVKEADLGELVSSGSLIEGQGSC 430
Query: 132 SVMEVILHDGEGAPV 146
V+ G+G V
Sbjct: 431 GGEAVVPSPGDGRTV 445
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 77 GYMASVMDAVSLYALISRSDGR--LGWTTNMNISYLKPARLGDTITVESNLLTGGASS 132
GY MD Y L+ R+ GR + W ++S PA L T V G S+
Sbjct: 53 GYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAVLSTTTRVPDRPKENGRST 110
>01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847
Length = 943
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 128 GGASSVMEVILHDGEGAPVAKST-TSFISGSDKFQKILK 165
GG +V + +L DG+ + K T +S + D F++ +K
Sbjct: 672 GGFGAVYKTVLRDGQPVAIKKLTVSSLVKSKDDFERQVK 710
>07_01_0044 - 348439-349539,351979-352301,352418-352550
Length = 518
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 70 IGDTLHGGYMASVMDAVSLY-ALISRSDGRLGWTTNMNISYLKPARLGDTITVESNLL 126
IGD + GY A V+ + +Y A + S G LGW I L+ G +I V N+L
Sbjct: 379 IGD-IPKGYAAVVVLFICMYVAGFAWSWGPLGWLVPSEIFPLEIRPAGQSINVSVNML 435
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 27.1 bits (57), Expect = 8.4
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 46 ELKTAHLTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALI---SRSDGRLGWT 102
++ TA +T L S VV NI H Y+ S++ V+L A I S G + W
Sbjct: 339 QISTAGMTLSLLAVS-VVFFLEGNISHDSHSFYILSMISLVALVAYIITFSFGMGAIPWV 397
Query: 103 TNMNISYLKPARLGDTITVESNLLTGGASSVMEVIL 138
I + LG + +N+LT A ++ +L
Sbjct: 398 MMSEILPVSIKSLGGSFATLANMLTSWAITMTANLL 433
>04_04_0193 + 23482177-23484963
Length = 928
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 26 PEARAWLATTTSAYPILRCRELKTAHLTEGCLK 58
PE+ A + ++ ++RC LK +L GCLK
Sbjct: 865 PESIAVNFPSLASLKVVRCSRLKKLNLVAGCLK 897
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 44 CRELKTAHLTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGR 98
CREL ++ L L+ M N+G T GG MA +DA+ A + +DG+
Sbjct: 620 CRELMSSKLFLKLLEAVLKTGNRM-NVG-TARGGAMAFKLDALLKLADVKGTDGK 672
>03_01_0308 + 2431213-2432040
Length = 275
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 102 TTNMNISYLKPARLGDTITVESNLLTGGASSVMEVILHD--GEGAPVAKSTTSFI 154
TT +S P G ++ GGA +E+ +HD G +P A+ T +
Sbjct: 33 TTGAAVSATNPQNGGGGVSGGVGATAGGAHEPLELYMHDILGGSSPTARPITGLL 87
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,279,250
Number of Sequences: 37544
Number of extensions: 207583
Number of successful extensions: 490
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 22
length of query: 175
length of database: 14,793,348
effective HSP length: 77
effective length of query: 98
effective length of database: 11,902,460
effective search space: 1166441080
effective search space used: 1166441080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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