GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001596-TA|BGIBMGA001596-PA|IPR003736|Phenylacetic acid
degradation-related protein, IPR006683|Thioesterase superfamily
         (175 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000894-1|AAH00894.1|  140|Homo sapiens thioesterase superfamil...    54   4e-07
AL031775-3|CAD92509.1|  140|Homo sapiens thioesterase superfamil...    54   4e-07
AK000508-1|BAA91215.1|  140|Homo sapiens protein ( Homo sapiens ...    54   4e-07
AF274952-1|AAK07529.1|  140|Homo sapiens PNAS-27 protein.              54   4e-07
AF220186-1|AAF67651.1|  140|Homo sapiens uncharacterized hypotha...    54   4e-07
AF155649-1|AAF67006.1|  140|Homo sapiens hypothetical 15 kDa pro...    54   4e-07
BC065277-1|AAH65277.1|  240|Homo sapiens thioesterase superfamil...    34   0.23 
AL450992-3|CAI12162.1|  240|Homo sapiens thioesterase superfamil...    34   0.23 
AJ313515-1|CAC86384.1|  240|Homo sapiens C-terminal modulator pr...    34   0.23 
BC078159-1|AAH78159.1|  466|Homo sapiens FBXO38 protein protein.       29   8.7  
BC056147-1|AAH56147.1|  426|Homo sapiens FBXO38 protein protein.       29   8.7  
BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.       29   8.7  
BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.     29   8.7  
BC015366-1|AAH15366.1|  459|Homo sapiens FBXO38 protein protein.       29   8.7  
BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.       29   8.7  
BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.       29   8.7  
AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.        29   8.7  
AF177339-1|AAG17983.1|  444|Homo sapiens unknown protein.              29   8.7  

>BC000894-1|AAH00894.1|  140|Homo sapiens thioesterase superfamily
           member 2 protein.
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>AL031775-3|CAD92509.1|  140|Homo sapiens thioesterase superfamily
           member 2 protein.
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>AK000508-1|BAA91215.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20501 fis, clone KAT09263. ).
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>AF274952-1|AAK07529.1|  140|Homo sapiens PNAS-27 protein.
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>AF220186-1|AAF67651.1|  140|Homo sapiens uncharacterized
           hypothalamus protein HT012 protein.
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>AF155649-1|AAF67006.1|  140|Homo sapiens hypothetical 15 kDa
           protein protein.
          Length = 140

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 63  VDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVE 122
           V+    N   TLHGG  A+++D +S  AL+    G  G + +MNI+Y+ PA+LG+ I + 
Sbjct: 44  VEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVIT 103

Query: 123 SNLLTGG 129
           +++L  G
Sbjct: 104 AHVLKQG 110


>BC065277-1|AAH65277.1|  240|Homo sapiens thioesterase superfamily
           member 4 protein.
          Length = 240

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 74  LHGGYMASVMDA-VSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVESNL 125
           +HGG +A+++DA V + A+++   G +  T N+NI+Y +P  L   + + S L
Sbjct: 151 IHGGAIATMIDATVGMCAMMA---GGIVMTANLNINYKRPIPLCSVVMINSQL 200


>AL450992-3|CAI12162.1|  240|Homo sapiens thioesterase superfamily
           member 4 protein.
          Length = 240

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 74  LHGGYMASVMDA-VSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVESNL 125
           +HGG +A+++DA V + A+++   G +  T N+NI+Y +P  L   + + S L
Sbjct: 151 IHGGAIATMIDATVGMCAMMA---GGIVMTANLNINYKRPIPLCSVVMINSQL 200


>AJ313515-1|CAC86384.1|  240|Homo sapiens C-terminal modulator
           protein protein.
          Length = 240

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 74  LHGGYMASVMDA-VSLYALISRSDGRLGWTTNMNISYLKPARLGDTITVESNL 125
           +HGG +A+++DA V + A+++   G +  T N+NI+Y +P  L   + + S L
Sbjct: 151 IHGGAIATMIDATVGMCAMMA---GGIVMTANLNINYKRPIPLCSVVMINSQL 200


>BC078159-1|AAH78159.1|  466|Homo sapiens FBXO38 protein protein.
          Length = 466

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 278 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 336

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 337 LIKYEFF 343


>BC056147-1|AAH56147.1|  426|Homo sapiens FBXO38 protein protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 238 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 296

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 297 LIKYEFF 303


>BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.
          Length = 943

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 755 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 813

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 814 LIKYEFF 820


>BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 925 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 983

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 984 LIKYEFF 990


>BC015366-1|AAH15366.1|  459|Homo sapiens FBXO38 protein protein.
          Length = 459

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 271 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 329

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 330 LIKYEFF 336


>BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 580 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 638

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 639 LIKYEFF 645


>BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 580 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 638

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 639 LIKYEFF 645


>AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.
          Length = 772

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 584 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 642

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 643 LIKYEFF 649


>AF177339-1|AAG17983.1|  444|Homo sapiens unknown protein.
          Length = 444

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 107 ISYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKD 166
           I YL+P +  DT+T+E  L +G     +  I+H+    P  ++     S  D    I ++
Sbjct: 256 IIYLRPMQQVDTLTLEQKLFSGPYPYHI-CIIHEFSNPPNVRNKVRIRSWMDTIANINQE 314

Query: 167 NLDFDVF 173
            + ++ F
Sbjct: 315 LIKYEFF 321


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,873,894
Number of Sequences: 224733
Number of extensions: 984838
Number of successful extensions: 1598
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1592
Number of HSP's gapped (non-prelim): 18
length of query: 175
length of database: 73,234,838
effective HSP length: 85
effective length of query: 90
effective length of database: 54,132,533
effective search space: 4871927970
effective search space used: 4871927970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)