Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001596-TA|BGIBMGA001596-PA|IPR003736|Phenylacetic acid
degradation-related protein, IPR006683|Thioesterase superfamily
(175 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29535-16|AAN63448.1| 143|Caenorhabditis elegans Hypothetical p... 60 1e-09
U29535-15|AAN63449.1| 148|Caenorhabditis elegans Hypothetical p... 54 4e-08
L08403-2|AAA28024.2| 169|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z69884-1|CAA93748.1| 313|Caenorhabditis elegans Hypothetical pr... 31 0.45
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical... 31 0.60
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical... 31 0.60
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical... 31 0.60
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct... 31 0.60
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct... 31 0.60
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct... 31 0.60
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 30 0.79
U61954-5|AAK29811.2| 459|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 27 5.6
Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical p... 27 9.7
D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper transpor... 27 9.7
AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical ... 27 9.7
AF006635-1|AAB62695.1| 1116|Caenorhabditis elegans P-type ATPase... 27 9.7
>U29535-16|AAN63448.1| 143|Caenorhabditis elegans Hypothetical
protein C25H3.14 protein.
Length = 143
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 45 RELKTAHLTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTN 104
R ++ H EG L+ F V+ N +TLHGG A+++D + AL+ + R G + +
Sbjct: 29 RNVRAVHAEEGNLRVEFEVEKDQTNQFETLHGGCTAALIDCFTTGALLLTKEARPGVSVD 88
Query: 105 MNISYLKPARLGDTITVESNLLTGGAS 131
++I+YL A +G+T+ + S ++ G S
Sbjct: 89 LHITYLTAANIGETLVLNSTVIKQGRS 115
>U29535-15|AAN63449.1| 148|Caenorhabditis elegans Hypothetical
protein C25H3.3 protein.
Length = 148
Score = 54.4 bits (125), Expect = 4e-08
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 47 LKTAHLTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYALISRSDGRLGWTTNMN 106
++ H EG L+ F V+ N +TLHGG ++++D + AL+ R G + +++
Sbjct: 31 VRAVHAEEGNLRVEFEVEKDQSNHFNTLHGGCTSTLIDIFTTGALLLTKPARPGVSVDLH 90
Query: 107 ISYLKPARLGDTITVESNLLTGG 129
++YL A++G+T+ ++S ++ G
Sbjct: 91 VTYLTAAKIGETLVLDSTVIKQG 113
>L08403-2|AAA28024.2| 169|Caenorhabditis elegans Hypothetical
protein F42H10.6 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 52 LTEGCLKGSFVVDPSMCNIGDTLHGGYMASVMDAVSLYAL-ISRSDGRLGWTTNMNISYL 110
+T+ L VV N TLHGG A++ D ++ A+ ++ D + + + +SYL
Sbjct: 49 VTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMA-SVELAVSYL 107
Query: 111 KPARLGDTITVESNLLTGG 129
P ++GD + + +++L G
Sbjct: 108 LPVKVGDVLEITAHVLKVG 126
>Z69884-1|CAA93748.1| 313|Caenorhabditis elegans Hypothetical
protein F31F6.1 protein.
Length = 313
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 17 KSITLLQPEPEARAWLATTTSAYPILRCRELKTAHLTEGCLKGSFVVDPSMCN 69
+S LL P W A + +LR R LK L G ++G+ V++ S C+
Sbjct: 222 ESSILLDGSPST-IWSACPNDSLELLRARRLKKYILHRGAVRGNSVLEASTCS 273
>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
protein Y51A2D.19c protein.
Length = 1131
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 1000 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1040
>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
protein Y51A2D.19b protein.
Length = 1118
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 987 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1027
>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
protein Y51A2D.19a protein.
Length = 1140
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 1009 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1049
>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conductance
calcium-activatedpotassium channel SLO-1c protein.
Length = 1131
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 1000 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1040
>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conductance
calcium-activatedpotassium channel SLO-1b protein.
Length = 1118
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 987 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1027
>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conductance
calcium-activatedpotassium channel SLO-1a protein.
Length = 1140
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 119 ITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDK 159
+T+ L+TGGA+ +E+IL +G G ST +S D+
Sbjct: 1009 LTLIRTLVTGGATPELELILAEGAGLRGGYSTPETLSNRDR 1049
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 30.3 bits (65), Expect = 0.79
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 108 SYLKPARLGDTITVESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKF-QKILKD 166
S + R T T +NL G V EV D + + A TSF SG++ F K K+
Sbjct: 2500 SEVSNTRRSQTFTSGTNLAKRGLPCVEEVDTDDSKSSDYASVHTSFSSGNELFAPKAEKE 2559
Query: 167 NLD 169
+D
Sbjct: 2560 KVD 2562
>U61954-5|AAK29811.2| 459|Caenorhabditis elegans Hypothetical
protein F41H10.11 protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 10 NPLNIVDKSITLLQPEPEARAWLATTTSA 38
+P+N+VD SI+ + P R +L+TT ++
Sbjct: 177 SPINLVDSSISAIPMNPSDREFLSTTMAS 205
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 22 LQPEPEARAWLATTTSAYPILRCRELKTA 50
++P+PE+ + L T + +P ++CR L T+
Sbjct: 378 IEPDPESPSSLIVTANYFPNMKCRILITS 406
>Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 122 ESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKDNLDFDV 172
+S + G ASS + IL G+ + +T+ SGS K Q++L DN+ D+
Sbjct: 1185 DSAVFRGAASSKLS-ILSSKVGSLLGSTTSIVSSGSSKKQRLL-DNVGSDL 1233
>D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper transporting
ATPase protein.
Length = 1238
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 122 ESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKDNLDFDV 172
+S + G ASS + IL G+ + +T+ SGS K Q++L DN+ D+
Sbjct: 1185 DSAVFRGAASSKLS-ILSSKVGSLLGSTTSIVSSGSSKKQRLL-DNVGSDL 1233
>AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 122 ESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKDNLDFDV 172
+S + G ASS + IL G+ + +T+ SGS K Q++L DN+ D+
Sbjct: 1185 DSAVFRGAASSKLS-ILSSKVGSLLGSTTSIVSSGSSKKQRLL-DNVGSDL 1233
>AF006635-1|AAB62695.1| 1116|Caenorhabditis elegans P-type ATPase
protein.
Length = 1116
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 122 ESNLLTGGASSVMEVILHDGEGAPVAKSTTSFISGSDKFQKILKDNLDFDV 172
+S + G ASS + IL G+ + +T+ SGS K Q++L DN+ D+
Sbjct: 1063 DSAVFRGAASSKLS-ILSSKVGSLLGSTTSIVSSGSSKKQRLL-DNVGSDL 1111
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,215,088
Number of Sequences: 27539
Number of extensions: 158887
Number of successful extensions: 346
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 333
Number of HSP's gapped (non-prelim): 17
length of query: 175
length of database: 12,573,161
effective HSP length: 77
effective length of query: 98
effective length of database: 10,452,658
effective search space: 1024360484
effective search space used: 1024360484
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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