Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001595-TA|BGIBMGA001595-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase
(391 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25903| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0) 52 8e-07
SB_42548| Best HMM Match : DNA_binding_1 (HMM E-Value=5.2) 50 2e-06
SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10) 43 4e-04
SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_42741| Best HMM Match : CN_hydrolase (HMM E-Value=4.6e-14) 32 0.69
SB_34841| Best HMM Match : ResIII (HMM E-Value=1.6) 31 1.6
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 3.7
SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10) 29 4.9
SB_24587| Best HMM Match : ResIII (HMM E-Value=0.82) 29 6.5
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 29 8.5
SB_6951| Best HMM Match : PXA (HMM E-Value=6.2) 29 8.5
>SB_25903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 75.4 bits (177), Expect = 8e-14
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 328 RCPGLSRTRDGLLIAAVDLNLNRQIKDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 386
R GLSRTRDGLL+ VDLNL RQ+KD+ + MT RL+MY SLS+ ++ +Y+P +VHE
Sbjct: 38 RYHGLSRTRDGLLVTEVDLNLCRQVKDKWGFQMTSRLEMYAKSLSEAVQRNYEPPIVHE 96
>SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0)
Length = 242
Score = 52.0 bits (119), Expect = 8e-07
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 71 IVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTR 130
+ ++G+VQ +AV ++ N Q+ K+K+ + G I+ E +N P+
Sbjct: 5 VFRIGLVQ--LAVTANKLQNLQRAR--EKIKEAVAA----GAKIVALPECFNSPYG---- 52
Query: 131 EKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISDTGN 189
Q + ++AE G ++ L E+A + IV SI ER L+NT++ +GN
Sbjct: 53 -TQYFKDYAEEIP-GESSNMLAEVAKETGAYIVGGSIPERASNRK--LYNTSLSYDPSGN 108
Query: 190 VIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF 234
++GKHRK H +P F ES G + T Y KI + IC+
Sbjct: 109 LMGKHRKIHLFDIDVPGKIRFQESEVLSPGE-NLTILDTEYCKIGIGICY 157
>SB_42548| Best HMM Match : DNA_binding_1 (HMM E-Value=5.2)
Length = 101
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1 MENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFP 60
M E SL + NL DL+E RI +G + ++ L +++
Sbjct: 1 MAAEFESLNKTLEKNLPAEDLKEVKRILYGNPVS-DLSLPAAAVSVAAELDFELAGYKID 59
Query: 61 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQ 92
A E+ R PR+V++G VQ+ I PT+ P+ +Q
Sbjct: 60 AAAEELRQPRLVRIGAVQNKIVEPTNMPIAKQ 91
>SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10)
Length = 128
Score = 43.2 bits (97), Expect = 4e-04
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 138 FAESAED--GPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISDTGNVIGKH 194
F + AE+ G ++ L E+A + IV SI ER L+NT++ +GN++GKH
Sbjct: 12 FKDYAEEIPGESSNMLAEVAKETGAYIVGGSIPERASNGK--LYNTSLSYDPSGNLMGKH 69
Query: 195 RKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF 234
RK H +P F ES G + T Y KI + IC+
Sbjct: 70 RKIHLFDIDVPGKIRFQESEVLSPGE-NLTILDTEYCKIGIGICY 113
>SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 41.5 bits (93), Expect = 0.001
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 68 PPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAF 127
P + ++G+VQ +AV ++ N Q+ K+K+ + G I+ E +N P+
Sbjct: 4 PILVFRIGLVQ--LAVTANKLQNLQRAR--EKIKEAVAA----GAKIVALPECFNSPYG- 54
Query: 128 CTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISD 186
Q + ++AE G ++ L E+A + IV SI ER L+NT++
Sbjct: 55 ----TQYFKDYAEEIP-GESSNMLAEVAKETGAYIVGGSIPERASNGK--LYNTSLSYDP 107
Query: 187 TGNVIGKHRK 196
+GN++GKHRK
Sbjct: 108 SGNLMGKHRK 117
>SB_42741| Best HMM Match : CN_hydrolase (HMM E-Value=4.6e-14)
Length = 255
Score = 32.3 bits (70), Expect = 0.69
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 144 DGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVG 203
DG + ++L++ A IV SI+ +++++ +N + + TG I + K H +
Sbjct: 58 DGNSVSWLKQKAATLDAAIVGSIIIKEQEN---YYNRLLFVHPTGT-IESYDKRHAFTLA 113
Query: 204 DFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGE 263
NE Y GN + + + KI IC+ + W +N +++ +
Sbjct: 114 GENEK--YATGNK-KLIVSYKGWKICPLICYDLRFPV-WSRNVENYDVLMYVAN----WP 165
Query: 264 GGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 301
+ WN + AI N + +NRVG + +E++
Sbjct: 166 KPRIHAWNTLLKARAIENMSYCIGVNRVGVDANGHEYS 203
>SB_34841| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 949
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 61 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 106
A D + P VK H + +PT++P+ E + + +++K+ ++ +V
Sbjct: 762 AHDHRNNPSLAVKAQTYHHYLCIPTEKPIEEWRPSELWHKLDRLAEV 808
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 29.9 bits (64), Expect = 3.7
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 63 DEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWN 122
DEQ P V + I VP D V++ +V + I V ++ I Q+
Sbjct: 1695 DEQVSQPITVLDEQILQPITVP-DEQVSQPITVPDEQVSQPITVQNKKDSQQIAVQDERT 1753
Query: 123 MPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAV 182
PF TR+K P E ++ D + +E V S LE + + +T V
Sbjct: 1754 EPF---TRQKYPLFEISQQDHDLESEIMSKETVFWPVRVKQESALESETPEQEPFLDTVV 1810
Query: 183 V 183
V
Sbjct: 1811 V 1811
>SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 322 CGPDG----VRCPGLSRTRDGL--LIAAVDLNLNRQIKDRRCYYMTQRLDMYVNSLSKVL 375
C PDG VRC + ++R + L A + + N ++ RRC + +L+ NS+S++L
Sbjct: 183 CRPDGYIPLVRCSVVLQSRSCIQTLRATLQNDWNAILRKRRCNVVESKLNHGANSISRLL 242
>SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 29.5 bits (63), Expect = 4.9
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 179 NTAVVISDTGNVIGK---HRKNHIPRVGDFNE----SNYYMEGN-TGHPVFATRYGKI 228
NTA +IS+TG+VI K H K + P D + Y GN TG PV+A YG++
Sbjct: 52 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGNVTGDPVYA-NYGRV 108
>SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 61 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 106
AKD + P VK H + +P ++P+ E + + + +K+ ++ +V
Sbjct: 823 AKDHRNNPRLAVKAQTYHHYLCIPAEKPIEEWRPSELGHKLDRLAEV 869
>SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10)
Length = 326
Score = 29.5 bits (63), Expect = 4.9
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 179 NTAVVISDTGNVIGK---HRKNHIPRVGDFNE----SNYYMEGN-TGHPVFATRYGKI 228
NTA +IS+TG+VI K H K + P D + Y GN TG PV+A YG++
Sbjct: 143 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGNVTGDPVYA-NYGRV 199
>SB_24587| Best HMM Match : ResIII (HMM E-Value=0.82)
Length = 250
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 61 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 106
A D + P VK H + +PT++P+ E + + + +K+ ++ +V
Sbjct: 177 AHDHRNNPRLAVKAQTYHHYLCIPTEKPIEEWRPSELGHKLDRLAEV 223
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 93 KKAIFNKVKKIIDVAGQEGVNIICFQELWNMP----FAFCTREKQPWCEFAESAEDGPT 147
KKA NKV KI Q+ + + + + P +C + K WC + S DG T
Sbjct: 368 KKAKTNKVAKI-----QKAIKAVLYHSVKTEPANARHQYCPKGKDSWCGYQRSLLDGKT 421
>SB_6951| Best HMM Match : PXA (HMM E-Value=6.2)
Length = 284
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 93 KKAIFNKVKKIIDVAGQEGVNIICFQELWNMP----FAFCTREKQPWCEFAESAEDGPT 147
KKA NKV KI Q+ + + + + P +C + K WC + S DG T
Sbjct: 123 KKAKTNKVAKI-----QKAIKAVLYHSVKTEPANARHQYCPKGKDSWCGYQRSLLDGKT 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,465,875
Number of Sequences: 59808
Number of extensions: 564999
Number of successful extensions: 923
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 918
Number of HSP's gapped (non-prelim): 16
length of query: 391
length of database: 16,821,457
effective HSP length: 84
effective length of query: 307
effective length of database: 11,797,585
effective search space: 3621858595
effective search space used: 3621858595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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