GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001595-TA|BGIBMGA001595-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase
         (391 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   3.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   5.9  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/60 (18%), Positives = 25/60 (41%)

Query: 245 FGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSAD 304
           +G  G +I+ +    +   G  ++   ++ +     + Y   AIN   YE+   +F   +
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/60 (18%), Positives = 25/60 (41%)

Query: 245 FGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSAD 304
           +G  G +I+ +    +   G  ++   ++ +     + Y   AIN   YE+   +F   +
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 6/45 (13%)

Query: 1   MENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLE-IKLKESSI 44
           ++N+  S+E+  N + T  D+E++         NLE +KLKE  I
Sbjct: 177 LDNQEVSMENTENKSCTDSDIEKYKMF-----CNLENVKLKELRI 216


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,752
Number of Sequences: 429
Number of extensions: 5242
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 391
length of database: 140,377
effective HSP length: 59
effective length of query: 332
effective length of database: 115,066
effective search space: 38201912
effective search space used: 38201912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)