Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001594-TA|BGIBMGA001594-
PA|IPR002498|Phosphatidylinositol-4-phosphate 5-kinase
(404 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38972| Best HMM Match : PIP5K (HMM E-Value=0) 203 2e-52
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 47 2e-05
SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.95
SB_47169| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.95
SB_10192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_43438| Best HMM Match : DUF965 (HMM E-Value=0.71) 29 8.9
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 29 8.9
>SB_38972| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 426
Score = 203 bits (496), Expect = 2e-52
Identities = 93/163 (57%), Positives = 120/163 (73%)
Query: 118 PIPDDSSGKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYIVERHGKTLLPQYLG 177
PI DS G+SGAKF+ S ++ F +K + SEEVER+H+ L+ YH +IVE+H TLLPQYL
Sbjct: 123 PISSDSPGRSGAKFFLSQNKRFYVKVIESEEVERLHNILQPYHHHIVEQHANTLLPQYLA 182
Query: 178 MYRLTVDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDNDFLK 237
MYR+TVDG E Y++ +VFS L IH+KYDLKGSTVDR+AS PT KDNDF K
Sbjct: 183 MYRVTVDGKESYMLVMTSVFSTRLKIHKKYDLKGSTVDRQASLKEKTRDNPTFKDNDFTK 242
Query: 238 QGVRIDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVHEC 280
V++ IG+ AK L+E + ADVEFL L++MDYSLL+G+H+C
Sbjct: 243 DNVKLVIGDEAKAVLVERIKADVEFLISLNIMDYSLLVGIHDC 285
Score = 103 bits (246), Expect = 3e-22
Identities = 42/56 (75%), Positives = 51/56 (91%)
Query: 1 MLLPDDFRAYSKLKVDNHLFNKENMPSHFKVKEYCPLVFRNLRDRFAIDDLDYKES 56
ML+PDDF+AYSK++VDNHLFNKEN+PSHFK KEYCP+VFRNLR+RF I+D D E+
Sbjct: 63 MLMPDDFKAYSKVRVDNHLFNKENLPSHFKFKEYCPMVFRNLRERFGIEDKDLAEA 118
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 47.2 bits (107), Expect = 2e-05
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 124 SGKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYHPYI---VERHGKTLLPQYLGMYR 180
+G+ F+ F+LK ++ E++ F +Y Y+ + LL + LG+YR
Sbjct: 1882 TGQEPLNFHIKMHDRFVLKQMSKLELQSFLEFAPYYFQYMNKSLNDKRPPLLAKILGVYR 1941
Query: 181 ------LTVDGIEHYLVATRNVFSNHLNIHRKYDLKGSTVDREASXXXXXXXXPTLKDND 234
LT + +V N+F + I +DLKGS R L D +
Sbjct: 1942 IGYKNSLTNATMRQDVVVMENLFYDR-KIDETFDLKGSMRGRYVESSGVDND--VLLDEN 1998
Query: 235 FLKQGVR---IDIGEAAKEKLLETLTADVEFLTKLHLMDYSLLLGVHE 279
L+ +R I I +K L + + D EFL + +MDYSLL+G+ +
Sbjct: 1999 LLEM-IREHPIFIRPHSKAVLSKAIFKDTEFLAQHMVMDYSLLVGIDQ 2045
>SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 31.9 bits (69), Expect = 0.95
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 114 LRSQPIPDDSS-GKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYH 160
L ++P+ + S+ G SG+ FY + D FI+KT+ +E E + L Y+
Sbjct: 114 LCNEPLVELSNPGASGSLFYVTCDDEFIIKTVQHKEAEFLQKLLPGYY 161
>SB_47169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 31.9 bits (69), Expect = 0.95
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 114 LRSQPIPDDSS-GKSGAKFYQSYDRLFILKTLTSEEVERMHSFLKHYH 160
L ++P+ + S+ G SG+ FY + D FI+KT+ +E E + L Y+
Sbjct: 3 LCNEPLVELSNPGASGSLFYVTCDDEFIIKTVQHKEAEFLQKLLPGYY 50
>SB_10192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 326 PRGFGRQTSLRYEGIIPELDIYAIPSQE-GQTTDGSFWLQAAKAAKTVKYGSNVDGIS 382
P+ FG + YEG IP+L Y +P + +Q++KA ++Y S DG++
Sbjct: 272 PKVFGFEDVEGYEGPIPDLSYYDLPIRSYAPFLYRQHDVQSSKALLWLQYRSQHDGVA 329
>SB_43438| Best HMM Match : DUF965 (HMM E-Value=0.71)
Length = 130
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 37 LVFRNLRDRFAIDDLDYKESLTRFSHPDNYLRSKARKRAISSLRRSATAPTGVADLHQDS 96
LV R RF ++D + R D+ L+ + + A+SS+ RSA+A G + +
Sbjct: 60 LVDRGYDSRFVAREVDRVRRIPR----DDTLKDRRKVYAVSSIPRSASAGEGTSGIRARG 115
Query: 97 IFHDASAFVKRGL 109
I ++KR L
Sbjct: 116 I-RMTIVYIKRAL 127
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 30 KVKEYCPLVFRNLRDRFAIDDLDYKESLTRFSHPDNYLRSKARKRAISSLRRSATA 85
K +E CP V R+R+ YK+ L R P S+ KR ++ RR TA
Sbjct: 280 KFREQCPYV----RERYCRVVTQYKKFLCRTVRPSGIGLSRNTKRLFNAQRRRLTA 331
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,535,684
Number of Sequences: 59808
Number of extensions: 494358
Number of successful extensions: 976
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 968
Number of HSP's gapped (non-prelim): 11
length of query: 404
length of database: 16,821,457
effective HSP length: 84
effective length of query: 320
effective length of database: 11,797,585
effective search space: 3775227200
effective search space used: 3775227200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -