GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001594-TA|BGIBMGA001594-
PA|IPR002498|Phosphatidylinositol-4-phosphate 5-kinase
         (404 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   4.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 341  IPELDIYAIPSQEGQTTDGSFWLQAAKAAKTVKYGSNVDGISTCD 385
            +P +D+   PS  G+  DGS  L +     ++    + D  ST D
Sbjct: 1372 VPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRD 1416


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 53  YKESLTRFSHPDNYLRSKARKRAISSLRRSATAPTGVADL 92
           Y + ++   + +  LR +A+K  + SLR +A   +  A++
Sbjct: 231 YSQIVSHVVNHEKALREQAKKMNVDSLRSNANTSSQSAEI 270


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,193
Number of Sequences: 429
Number of extensions: 4130
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 404
length of database: 140,377
effective HSP length: 59
effective length of query: 345
effective length of database: 115,066
effective search space: 39697770
effective search space used: 39697770
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)