GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001593-TA|BGIBMGA001593-PA|IPR009346|GRIM-19
         (153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   0.66 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   0.88 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   2.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   3.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   3.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   8.2  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 3   EAFQVAKKQDLPPPGGYKPI 22
           E  Q A+ +D P PGG+  I
Sbjct: 227 EQIQAAEVKDFPSPGGFPSI 246


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 0.88
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 47  IGSIYLYNITYKRILKDEIEMRSAKMAIYPALLAER 82
           I +I  YN T  R L+DE+  +  K  +    L++R
Sbjct: 348 IPAILYYNYTVDRDLQDEVSQKIRKYYLGEKKLSKR 383


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 47  IGSIYLYNITYKRILKDEIEMRSAK 71
           I +I  YN T  R L+DE+  +  K
Sbjct: 348 IPAILYYNYTVDRDLQDEVSQKIRK 372


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 47  IGSIYLYNITYKRILKDEIEMRSAK 71
           I +I  YN T  R L+DE+  +  K
Sbjct: 348 IPAILYYNYTVDRDLQDEVSQKIRK 372


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 22  IPFKRIPAKSYFSGYTMFAGF 42
           +PF  +  +  F GY  F GF
Sbjct: 354 LPFLNLQQQLPFPGYPFFGGF 374


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 47  IGSIYLYNITYKRILKDEIEMRSAK 71
           I  I  YN T  R L+DE+  +  K
Sbjct: 348 IPPILYYNYTVDRDLQDEVSQKIRK 372


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 47  IGSIYLYNITYKRILKDEIEMRSAK 71
           I  I  YN T  R L+DE+  +  K
Sbjct: 348 IPPILYYNYTVDRDLQDEVSQKIRK 372


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 115 ERVYKLIPPDQLVEPIFQEYYAHSDIKE 142
           E  YKL P ++  + I   Y   +D+K+
Sbjct: 67  EETYKLTPLNEQFDVIKDNYRKVTDLKK 94


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 122 PPDQLVEPIFQEYYAHSDIKEWNKRANI 149
           P D+L  PI Q    H++ ++ N+  ++
Sbjct: 38  PSDKLHHPIHQTVIYHNNPRDPNRARSV 65


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 7  VAKKQDLPPPGGY 19
          V   Q++PPP GY
Sbjct: 14 VLPHQEVPPPFGY 26


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,872
Number of Sequences: 317
Number of extensions: 1403
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 153
length of database: 114,650
effective HSP length: 52
effective length of query: 101
effective length of database: 98,166
effective search space:  9914766
effective search space used:  9914766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)