GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001593-TA|BGIBMGA001593-PA|IPR009346|GRIM-19
         (153 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071078-1|AAL48700.1|  154|Drosophila melanogaster RE14725p pro...   201   3e-52
AE014298-882|AAF46158.1|  154|Drosophila melanogaster CG3446-PA ...   201   3e-52
AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-P...    32   0.39 
AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA...    30   1.2  
AE013599-1733|AAF58364.1|  611|Drosophila melanogaster CG13330-P...    28   4.8  
AY069339-1|AAL39484.1|  425|Drosophila melanogaster LD05321p pro...    27   8.3  
AE014134-2338|AAF53292.1|  425|Drosophila melanogaster CG6565-PA...    27   8.3  

>AY071078-1|AAL48700.1|  154|Drosophila melanogaster RE14725p
           protein.
          Length = 154

 Score =  201 bits (491), Expect = 3e-52
 Identities = 89/144 (61%), Positives = 116/144 (80%)

Query: 10  KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTIGSIYLYNITYKRILKDEIEMRS 69
           KQDLPPPGGYK IPF R+P KSYF+G+T    ++ +T   + +Y +T K++ +DEIEMRS
Sbjct: 11  KQDLPPPGGYKKIPFARVPPKSYFTGFTTIGTYVVVTAVGLGIYYLTAKKVKRDEIEMRS 70

Query: 70  AKMAIYPALLAERDREYLKQLRRNRDAEAELMRDVPGWEVGTYYGERVYKLIPPDQLVEP 129
           A+  I+P L+AERDRE+L+QLRRNRD EAELM++VPGWEVGT+YGE V+K +P D LV P
Sbjct: 71  AQNVIFPILVAERDREFLRQLRRNRDEEAELMKNVPGWEVGTWYGEPVFKTLPEDTLVTP 130

Query: 130 IFQEYYAHSDIKEWNKRANIKLLS 153
           IF+E+YAHSD K + KRA++KL S
Sbjct: 131 IFKEFYAHSDWKSYAKRAHLKLWS 154


>AE014298-882|AAF46158.1|  154|Drosophila melanogaster CG3446-PA
           protein.
          Length = 154

 Score =  201 bits (491), Expect = 3e-52
 Identities = 89/144 (61%), Positives = 116/144 (80%)

Query: 10  KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTIGSIYLYNITYKRILKDEIEMRS 69
           KQDLPPPGGYK IPF R+P KSYF+G+T    ++ +T   + +Y +T K++ +DEIEMRS
Sbjct: 11  KQDLPPPGGYKKIPFARVPPKSYFTGFTTIGTYVVVTAVGLGIYYLTAKKVKRDEIEMRS 70

Query: 70  AKMAIYPALLAERDREYLKQLRRNRDAEAELMRDVPGWEVGTYYGERVYKLIPPDQLVEP 129
           A+  I+P L+AERDRE+L+QLRRNRD EAELM++VPGWEVGT+YGE V+K +P D LV P
Sbjct: 71  AQNVIFPILVAERDREFLRQLRRNRDEEAELMKNVPGWEVGTWYGEPVFKTLPEDTLVTP 130

Query: 130 IFQEYYAHSDIKEWNKRANIKLLS 153
           IF+E+YAHSD K + KRA++KL S
Sbjct: 131 IFKEFYAHSDWKSYAKRAHLKLWS 154


>AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-PA
           protein.
          Length = 208

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 14  PPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGM-TIGSIYLYNITYKRILK 62
           PPP  YKP PF  IP  S+ S        I + T+G I L  + +K+I+K
Sbjct: 108 PPPPFYKPAPF--IPYHSHDSILEKLKSKINLYTLGKILLKLLIFKKIVK 155


>AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA
           protein.
          Length = 558

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/76 (27%), Positives = 29/76 (38%)

Query: 71  KMAIYPALLAERDREYLKQLRRNRDAEAELMRDVPGWEVGTYYGERVYKLIPPDQLVEPI 130
           K A Y  L  E  + +L +L  N D   E ++ VP     TY         P  +   P+
Sbjct: 482 KCARYRELTFESFKRFLHRLHTNSDIFMESLKAVPNKITNTYRCCIDANFCPSYKRTCPM 541

Query: 131 FQEYYAHSDIKEWNKR 146
              Y  H D+  W  R
Sbjct: 542 APFYRTHLDLDNWKYR 557


>AE013599-1733|AAF58364.1|  611|Drosophila melanogaster CG13330-PA
           protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 81  ERDREYLKQLRRNRDAEAELMRDV 104
           ERDRE L+QL R RD E  L  +V
Sbjct: 309 ERDREQLRQLERMRDEERLLELEV 332


>AY069339-1|AAL39484.1|  425|Drosophila melanogaster LD05321p
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 44  GMTIGSIYLYNITYKRILKDEIEMRSAKMAIYPALLAERDREYLKQLRRNR 94
           GM + ++ L  +  KR+  D  +    ++A+    L  RD E++  L  N+
Sbjct: 70  GMVMSAVGLVGLNIKRMGSDGFDWNKERLALSNFDLCRRDIEFINALPNNQ 120


>AE014134-2338|AAF53292.1|  425|Drosophila melanogaster CG6565-PA
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 44  GMTIGSIYLYNITYKRILKDEIEMRSAKMAIYPALLAERDREYLKQLRRNR 94
           GM + ++ L  +  KR+  D  +    ++A+    L  RD E++  L  N+
Sbjct: 70  GMVMSAVGLVGLNIKRMGSDGFDWNKERLALSNFDLCRRDIEFINALPNNQ 120


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.139    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,674,548
Number of Sequences: 52641
Number of extensions: 296386
Number of successful extensions: 805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 24,830,863
effective HSP length: 79
effective length of query: 74
effective length of database: 20,672,224
effective search space: 1529744576
effective search space used: 1529744576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)