GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001592-TA|BGIBMGA001592-PA|IPR002699|ATPase, V1/A1
complex, subunit D
         (285 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 105 TTTYLEAVEETGVTNALQYAGLGAGGHRTSEAKKSFREAVHLVLKLASLRKTCVLLDEAI 164
           TT YL  +    +  AL Y    A G+ ++   +SF+    LV   ++ + T VL  +  
Sbjct: 159 TTAYLHIITMINMNCALWYINCRAVGNASTALAESFQNV--LVPTASNSKSTKVLFKDVD 216

Query: 165 R 165
           R
Sbjct: 217 R 217


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 105 TTTYLEAVEETGVTNALQYAGLGAGGHRTSEAKKSFREAVHLVLKLASLRKTCVLLDEAI 164
           TT YL  +    +  AL Y    A G+ ++   +SF+    LV   ++ + T VL  +  
Sbjct: 159 TTAYLHIITMINMNCALWYINCRAVGNASTALAESFQNV--LVPTASNSKSTKVLFKDVD 216

Query: 165 R 165
           R
Sbjct: 217 R 217


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 105 TTTYLEAVEETGVTNALQYAGLGAGGHRTSEAKKSFREAVHLVLKLASLRKTCVLLDEAI 164
           TT YL  +    +  AL Y    A G+ ++   +SF+    LV   ++ + T VL  +  
Sbjct: 159 TTAYLHIITMINMNCALWYINCRAVGNASTALAESFQNV--LVPTASNSKSTKVLFKDVD 216

Query: 165 R 165
           R
Sbjct: 217 R 217


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 160  LDEAIRIAWRKVNGIEKVIMPKLRN 184
            + E++R   RK+  +EK+  P LR+
Sbjct: 1105 IQESLRDLNRKIESLEKMQYPDLRS 1129


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 160  LDEAIRIAWRKVNGIEKVIMPKLRN 184
            + E++R   RK+  +EK+  P LR+
Sbjct: 1105 IQESLRDLNRKIESLEKMQYPDLRS 1129


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 161 DEAIRIAWRKVNGIEKVIMPKLR 183
           DE I  +W ++N    V  PK +
Sbjct: 54  DERITYSWTEINAFANVSPPKTK 76


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,499
Number of Sequences: 317
Number of extensions: 1825
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 285
length of database: 114,650
effective HSP length: 56
effective length of query: 229
effective length of database: 96,898
effective search space: 22189642
effective search space used: 22189642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)