GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001592-TA|BGIBMGA001592-PA|IPR002699|ATPase, V1/A1
complex, subunit D
         (285 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.3  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   4.3  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   9.9  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 108  YLEAVEETGVTNALQYAGLGAGG 130
            YL  +E+  +T  + Y+G G GG
Sbjct: 2102 YLTRIEDPYLTETIDYSGSGYGG 2124


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 108  YLEAVEETGVTNALQYAGLGAGG 130
            YL  +E+  +T  + Y+G G GG
Sbjct: 2103 YLTRIEDPYLTETIDYSGSGYGG 2125


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 17  KEIKRRQEHVDRGYELLKRKAEGLRIKGRQVASELIA 53
           ++ +RR+E   R  E  K   E LR++ ++  + LIA
Sbjct: 75  EDAQRREEEARRREEAAKADNEKLRVEQQETHTTLIA 111


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 11  ASLFMLKEIKRRQEHVDRGYELLKRKAEGLRIKGRQVASELIATHGL 57
           AS F L E+K    H+   YEL + +   + +K  +  S L   +G+
Sbjct: 477 ASRFALMEVKAIVYHILLNYELKRSERTSVPVKLAKGFSPLKPENGM 523


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,862
Number of Sequences: 2123
Number of extensions: 8483
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 285
length of database: 516,269
effective HSP length: 63
effective length of query: 222
effective length of database: 382,520
effective search space: 84919440
effective search space used: 84919440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)