Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001590-TA|BGIBMGA001590-PA|IPR002653|Zinc finger,
A20-type
(509 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical ... 99 4e-21
U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical pr... 33 0.48
U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical pr... 33 0.48
U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical pr... 33 0.48
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 32 1.1
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 31 1.5
Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical pr... 30 4.4
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 30 4.4
Z81568-16|CAB76729.1| 215|Caenorhabditis elegans Hypothetical p... 29 5.9
AL032671-1|CAA21777.2| 215|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 29 5.9
U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical pr... 29 7.8
>AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical
protein Y50C1A.1 protein.
Length = 642
Score = 99 bits (238), Expect = 4e-21
Identities = 57/128 (44%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 66 LPDITVYPPDFRTFLEKDXXXXXXXXXXXXXNILNWWCHGRVPGAPRLLPLATSGDGNCL 125
LPD +P +FRTFLEKD LNWW H +L PL+T+GDGNCL
Sbjct: 81 LPDFGGFPNEFRTFLEKDLIETQTQKRLEASRHLNWW-H---QFGQKLYPLSTTGDGNCL 136
Query: 126 PHAASLAAYGFHDRLLALRTKVQALLSGEYGETITNAIRRRWRWSESASLCAAG--LVPS 183
HAASL +G HDR L+LR + LL+ + AIRRRW+W E+ + G L S
Sbjct: 137 LHAASLGMWGVHDRQLSLRETLYELLTNGARK---EAIRRRWKWVENHMNQSNGLALTLS 193
Query: 184 EGEWAREW 191
E EW EW
Sbjct: 194 ENEWELEW 201
Score = 91.1 bits (216), Expect = 2e-18
Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 198 GDPIAPIPFGGVYLPLELDPAQCSRAPVLLAYDAGHFSALVPCEPLPAAGARVPLEDSAG 257
G+ ++P+ FGG+YLPLE P+QC R+P++L YD+ HFS LV +P+ D
Sbjct: 259 GEELSPVAFGGIYLPLECPPSQCHRSPLVLCYDSAHFSPLVLMRTETNNKQIIPIIDVNR 318
Query: 258 NPMPIRFSVDPGEDFRWD-VEHDQKVINNLLPDEYERSAMLAAYLDLERVE 307
N +P+ F+VDPGE F W +E + + ++ A+++ Y+D+ R++
Sbjct: 319 NLLPVHFAVDPGESFDWSKLETNSNTQTTTDMSQIDKLALISQYMDIIRLD 369
>U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical
protein F55C12.5c protein.
Length = 543
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 277 EHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNSV 336
E +Q I LL +++ L + EC T + P RSLD++S KS +++ S
Sbjct: 98 ESEQSKIGALLEKAKKKTHKLVSSRKKNHSECGTSDVSPHPSMRSLDSIS-KSEERIASR 156
Query: 337 AKQFGSIGRSMSSKIKKN 354
GS + SK+ N
Sbjct: 157 RSSGGSSDQLKQSKVPDN 174
>U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical
protein F55C12.5a protein.
Length = 876
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 277 EHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNSV 336
E +Q I LL +++ L + EC T + P RSLD++S KS +++ S
Sbjct: 49 ESEQSKIGALLEKAKKKTHKLVSSRKKNHSECGTSDVSPHPSMRSLDSIS-KSEERIASR 107
Query: 337 AKQFGSIGRSMSSKIKKN 354
GS + SK+ N
Sbjct: 108 RSSGGSSDQLKQSKVPDN 125
>U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical
protein F55C12.5b protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 277 EHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNSV 336
E +Q I LL +++ L + EC T + P RSLD++S KS +++ S
Sbjct: 98 ESEQSKIGALLEKAKKKTHKLVSSRKKNHSECGTSDVSPHPSMRSLDSIS-KSEERIASR 156
Query: 337 AKQFGSIGRSMSSKIKKN 354
GS + SK+ N
Sbjct: 157 RSSGGSSDQLKQSKVPDN 174
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 276 VEHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNS 335
V+ QK+I N + E L ++L+R C + L L + + KQL+
Sbjct: 124 VQQRQKLIENSEKSQQETKEQLEKIVELQRKSCDQNKEKFTALELQLQETNERMQKQLDE 183
Query: 336 VAKQFGSIGRSM 347
+ +F + R +
Sbjct: 184 LNAKFEDVNRKL 195
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 292 ERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNSVAKQFGSIGRSMSSKI 351
+RS + + RVE +T + PEE + NS+ G +G SS +
Sbjct: 610 DRSVNIERSHNAVRVENLTASWDPEEAAGEKTLQDVDLTAPRNSLIAVVGKVGSGKSSLL 669
Query: 352 KKNFGSMAKLTGK 364
+ G M KL G+
Sbjct: 670 QALLGEMGKLRGR 682
>Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical
protein F22D6.2 protein.
Length = 189
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 485 CRAPLCAYYGSPANDDYCSRCAK 507
CRA C ++G+ A + YCS+C K
Sbjct: 14 CRAG-CGFFGASATEGYCSQCFK 35
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 280 QKVINNLL-PDEYERSAMLAAYLDLERVECVTQNQPPEELRRSLDALSTKSSKQLNSVAK 338
+ V+ L+ P E+E A LE+ + + + Q E R+ L+ K+ K + + K
Sbjct: 53 EDVLEELVKPKEWEVKLAEKARRKLEK-KALKKAQKEE--RKKEKKLAKKAMK-VEKIPK 108
Query: 339 QFGSIGRSMSSKIKKNFGSMAKLTGKSSGSQSNPEESLV 377
G I ++ I FG++A +TG++S S+ E + V
Sbjct: 109 IGGGIQKAKGKVIISAFGALAGITGENSSDDSDNEGAAV 147
>Z81568-16|CAB76729.1| 215|Caenorhabditis elegans Hypothetical
protein 3R5.1 protein.
Length = 215
Score = 29.5 bits (63), Expect = 5.9
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 206 FGGVYLPLELDPAQCSRAPVLLAYDAGHFSALVPCEPLPAAGARVPLEDSAG-------N 258
FG YL +E++ RA L++ ++G+F A+ + + G +
Sbjct: 94 FGKEYL-IEINVYDEHRAD-LVSLNSGNFVAIQNVHAASTPHREIQILHGGGEAYQRGIS 151
Query: 259 PMPIRFSVDPGEDFRWDVEHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEE 317
+P+ F VD ++F+ VE V+ N+L DE +++ ++ E VT+N+ PEE
Sbjct: 152 TVPVDFEVDAFQNFKRKVE---SVLENVLYDEN--------FIEFQQPEEVTENRVPEE 199
>AL032671-1|CAA21777.2| 215|Caenorhabditis elegans Hypothetical
protein 3R5.1 protein.
Length = 215
Score = 29.5 bits (63), Expect = 5.9
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 206 FGGVYLPLELDPAQCSRAPVLLAYDAGHFSALVPCEPLPAAGARVPLEDSAG-------N 258
FG YL +E++ RA L++ ++G+F A+ + + G +
Sbjct: 94 FGKEYL-IEINVYDEHRAD-LVSLNSGNFVAIQNVHAASTPHREIQILHGGGEAYQRGIS 151
Query: 259 PMPIRFSVDPGEDFRWDVEHDQKVINNLLPDEYERSAMLAAYLDLERVECVTQNQPPEE 317
+P+ F VD ++F+ VE V+ N+L DE +++ ++ E VT+N+ PEE
Sbjct: 152 TVPVDFEVDAFQNFKRKVE---SVLENVLYDEN--------FIEFQQPEEVTENRVPEE 199
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 368 SQSNPEESLVRRQSTCEVLCCRVLAARAPVQEEMVKNYLNEAWTGYTAEKNRKEASPCE 426
+QS + S+C + C L R P E ++ N+ + + Y + N+K E
Sbjct: 27 AQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYALQYNKKNLKHAE 85
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 368 SQSNPEESLVRRQSTCEVLCCRVLAARAPVQEEMVKNYLNEAWTGYTAEKNRKEASPCE 426
+QS + S+C + C L R P E ++ N+ + + Y + N+K E
Sbjct: 74 AQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYALQYNKKNLKHAE 132
>U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical
protein T02G5.11 protein.
Length = 184
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 305 RVEC-VTQNQPPEELRRSLDALSTKSSKQLNS-VAKQFGSIGR 345
R +C TQN PP E RR LST +S +S VA F G+
Sbjct: 3 RDDCDTTQNPPPAEYRRLPTFLSTNNSGFFDSVVASDFNLYGK 45
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,242,847
Number of Sequences: 27539
Number of extensions: 576229
Number of successful extensions: 1332
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1324
Number of HSP's gapped (non-prelim): 14
length of query: 509
length of database: 12,573,161
effective HSP length: 84
effective length of query: 425
effective length of database: 10,259,885
effective search space: 4360451125
effective search space used: 4360451125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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