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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001589-TA|BGIBMGA001589-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR001565|Synaptotagmin,
IPR008973|C2 calcium/lipid-binding region, CaLB
         (312 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr...    59   7e-10
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ...    43   5e-05
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom...    43   5e-05
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom...    32   0.091
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc...    30   0.37 
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy...    30   0.37 
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d...    30   0.37 
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr...    29   0.64 
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|...    28   2.0  
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom...    27   3.4  

>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1225

 Score = 59.3 bits (137), Expect = 7e-10
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 189  LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
            +TV ++KA +LP  D  G +DP+V   L   G+ + + KTH  KRTLNP FNESF  E+P
Sbjct: 1039 MTVDVIKATDLPAADSNGKSDPFVVFEL--QGEEVYRTKTH--KRTLNPTFNESFEVELP 1094

Query: 249  AAPNAALDHVSLELLVLDWDRVTKNEVIG 277
                      +    V DWD   K++ +G
Sbjct: 1095 CKQTC-----NFVANVFDWDFGNKDDHLG 1118



 Score = 29.1 bits (62), Expect = 0.85
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)

Query: 204 LTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELL 263
           L G  DPYV   ++ N       K+ V   T +PVFNE+F     +  N+  ++++LE  
Sbjct: 451 LGGAVDPYV---VIKNSADRVIGKSKVAHNTGSPVFNETFY----SVLNSFSENLNLE-- 501

Query: 264 VLDWDRVTKNEVIG 277
           V D++ +  ++++G
Sbjct: 502 VYDFNDIRSDKLLG 515


>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1429

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)

Query: 189  LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
            L  +L   +NLP  D+   +DP+V + L  NG+   K K  V K+ LNPV+NE     V 
Sbjct: 1080 LHFMLQDGQNLPIGDIRS-SDPFVVLKL--NGESAFKSK--VIKKNLNPVWNEEADIVVQ 1134

Query: 249  AAPNAALDHVSLELLVLDWDRVTKNEVIG 277
               N  LD   LEL+  DWD   K +V+G
Sbjct: 1135 ---NRVLD--VLELVCYDWDMGEKPDVLG 1158



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 15/131 (11%)

Query: 63   QNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAGITLH 122
            QNLP  +    DP+V L+L  + +   K++V++K   PV++E+     +  +++  + L 
Sbjct: 1088 QNLPIGDIRSSDPFVVLKL--NGESAFKSKVIKKNLNPVWNEEADI--VVQNRVLDV-LE 1142

Query: 123  FVVLSFDRYSRDEIIGEVVSPLSNLQLHSGEAMALCREIQPRSLKMRSAGRGEVLVSLCW 182
             V   +D   + +++G      SN+ L S E      E Q +S+K+ S   G +  SL +
Sbjct: 1143 LVCYDWDMGEKPDVLG-----TSNIDLLSLEPNV---ESQ-QSIKLDSK-TGTINASLRF 1192

Query: 183  QPAAARLTVVL 193
             P   R   VL
Sbjct: 1193 VPGWHRRKAVL 1203


>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1188

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 195 KARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAA 254
           +A +L + D+ GL+D Y+ +     G+ +    T V K+ LNP++NE + F +P  P+  
Sbjct: 477 RAEDLSKQDVNGLSDAYITVGFHKFGKPLYC--TRVVKQDLNPIWNE-YAF-IPVFPDQV 532

Query: 255 LDHVSLELLVLDWDRVTKNEVIGRLEL 281
                + + + D DR + ++V+GR ++
Sbjct: 533 KAGEKISIELWDSDRFSPDDVVGRTKI 559



 Score = 34.7 bits (76), Expect = 0.017
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 91  TRVVRKTRCPVYDEDFTFYGIAPHQI-AGITLHFVVLSFDRYSRDEIIGEVVSPLSNLQL 149
           TRVV++   P+++E + F  + P Q+ AG  +   +   DR+S D+++G     L  L  
Sbjct: 508 TRVVKQDLNPIWNE-YAFIPVFPDQVKAGEKISIELWDSDRFSPDDVVGRTKIGLHLLIQ 566

Query: 150 HSGEAMALC 158
            SG+    C
Sbjct: 567 DSGKMHERC 575


>SPAC31G5.15 |||phosphatidylserine decarboxylase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 980

 Score = 32.3 bits (70), Expect = 0.091
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 227 KTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELLVLDWDRVTKNEVI 276
           +T   +  LNPV+NE F+FEV A  +    +  L   V+D D+++ N+ I
Sbjct: 319 RTKWLRHNLNPVYNEKFLFEVGAFES----NYDLVFKVVDHDKMSLNDSI 364


>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 767

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 188 RLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEV 247
           R+ V ++ A  L + D+    DP+    L  +G++     T   K+TLNP +NE+  FEV
Sbjct: 9   RIRVTIVAADGLYKRDVFRFPDPFA--VLTVDGEQT--HTTTAIKKTLNPYWNET--FEV 62

Query: 248 PAAPNAAL 255
               N+ +
Sbjct: 63  NVTDNSTI 70


>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 786

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 183 QPAAARLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNES 242
           +  A R+   ++ A  L + DL    DP+    L  +G++     T V K+++NP +NE 
Sbjct: 2   EQGAKRVRFYIVAADGLSKRDLFRQPDPFA--ILTVDGEQT--HTTKVIKKSVNPYWNEG 57

Query: 243 FVFEVPAAPNAAL 255
             FEV   P++ +
Sbjct: 58  --FEVTVKPSSVI 68


>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
           dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 380

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 59  VVSCQNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAG 118
           +++C+     +PA P     +Q+ P + H+V+ ++V    C  + + +T  G  P  +  
Sbjct: 10  IINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVC--HTDAYTLSGKDPEGLFP 67

Query: 119 ITL 121
           + L
Sbjct: 68  VIL 70


>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 585

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 18  VNSLYTPHLIYVYFDFYHPIFVVIQSCHLRYENEKNALVVSVV 60
           + S +  H I  YF+++HP+F  I       EN   + + S+V
Sbjct: 139 IPSDFLEHYIEGYFEWFHPVFPFIHQASFNSENVAASFLRSLV 181


>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 272

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
           L V + KA+NLP   L G   PY    +   G+ + + +T  K+    P +N    F +P
Sbjct: 9   LVVRIWKAKNLPNKALVGKQSPYCVCRV---GEVVKRTQTD-KRSGQEPSWNAVLEFNIP 64

Query: 249 A 249
           +
Sbjct: 65  S 65


>SPBC6B1.05c |||ubiquitin-like conjugating
           enzyme|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 649

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 100 PVYDEDFTFYGIAPHQIAGITLHFVVL 126
           PV +ED T  G  PHQI G   +F ++
Sbjct: 553 PVLNEDQTVLGELPHQIRGFLHNFSLM 579


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.323    0.139    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,430,525
Number of Sequences: 5004
Number of extensions: 59215
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 14
length of query: 312
length of database: 2,362,478
effective HSP length: 73
effective length of query: 239
effective length of database: 1,997,186
effective search space: 477327454
effective search space used: 477327454
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)

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