BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001589-TA|BGIBMGA001589-PA|IPR000008|C2 calcium-dependent membrane targeting, IPR001565|Synaptotagmin, IPR008973|C2 calcium/lipid-binding region, CaLB (312 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 59 7e-10 SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 43 5e-05 SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 43 5e-05 SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 32 0.091 SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 30 0.37 SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 30 0.37 SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 30 0.37 SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 29 0.64 SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 28 2.0 SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 3.4 >SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1225 Score = 59.3 bits (137), Expect = 7e-10 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 9/89 (10%) Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248 +TV ++KA +LP D G +DP+V L G+ + + KTH KRTLNP FNESF E+P Sbjct: 1039 MTVDVIKATDLPAADSNGKSDPFVVFEL--QGEEVYRTKTH--KRTLNPTFNESFEVELP 1094 Query: 249 AAPNAALDHVSLELLVLDWDRVTKNEVIG 277 + V DWD K++ +G Sbjct: 1095 CKQTC-----NFVANVFDWDFGNKDDHLG 1118 Score = 29.1 bits (62), Expect = 0.85 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%) Query: 204 LTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELL 263 L G DPYV ++ N K+ V T +PVFNE+F + N+ ++++LE Sbjct: 451 LGGAVDPYV---VIKNSADRVIGKSKVAHNTGSPVFNETFY----SVLNSFSENLNLE-- 501 Query: 264 VLDWDRVTKNEVIG 277 V D++ + ++++G Sbjct: 502 VYDFNDIRSDKLLG 515 >SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1429 Score = 43.2 bits (97), Expect = 5e-05 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%) Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248 L +L +NLP D+ +DP+V + L NG+ K K V K+ LNPV+NE V Sbjct: 1080 LHFMLQDGQNLPIGDIRS-SDPFVVLKL--NGESAFKSK--VIKKNLNPVWNEEADIVVQ 1134 Query: 249 AAPNAALDHVSLELLVLDWDRVTKNEVIG 277 N LD LEL+ DWD K +V+G Sbjct: 1135 ---NRVLD--VLELVCYDWDMGEKPDVLG 1158 Score = 31.5 bits (68), Expect = 0.16 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 15/131 (11%) Query: 63 QNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAGITLH 122 QNLP + DP+V L+L + + K++V++K PV++E+ + +++ + L Sbjct: 1088 QNLPIGDIRSSDPFVVLKL--NGESAFKSKVIKKNLNPVWNEEADI--VVQNRVLDV-LE 1142 Query: 123 FVVLSFDRYSRDEIIGEVVSPLSNLQLHSGEAMALCREIQPRSLKMRSAGRGEVLVSLCW 182 V +D + +++G SN+ L S E E Q +S+K+ S G + SL + Sbjct: 1143 LVCYDWDMGEKPDVLG-----TSNIDLLSLEPNV---ESQ-QSIKLDSK-TGTINASLRF 1192 Query: 183 QPAAARLTVVL 193 P R VL Sbjct: 1193 VPGWHRRKAVL 1203 >SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 1188 Score = 43.2 bits (97), Expect = 5e-05 Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 4/87 (4%) Query: 195 KARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAA 254 +A +L + D+ GL+D Y+ + G+ + T V K+ LNP++NE + F +P P+ Sbjct: 477 RAEDLSKQDVNGLSDAYITVGFHKFGKPLYC--TRVVKQDLNPIWNE-YAF-IPVFPDQV 532 Query: 255 LDHVSLELLVLDWDRVTKNEVIGRLEL 281 + + + D DR + ++V+GR ++ Sbjct: 533 KAGEKISIELWDSDRFSPDDVVGRTKI 559 Score = 34.7 bits (76), Expect = 0.017 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 91 TRVVRKTRCPVYDEDFTFYGIAPHQI-AGITLHFVVLSFDRYSRDEIIGEVVSPLSNLQL 149 TRVV++ P+++E + F + P Q+ AG + + DR+S D+++G L L Sbjct: 508 TRVVKQDLNPIWNE-YAFIPVFPDQVKAGEKISIELWDSDRFSPDDVVGRTKIGLHLLIQ 566 Query: 150 HSGEAMALC 158 SG+ C Sbjct: 567 DSGKMHERC 575 >SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharomyces pombe|chr 1|||Manual Length = 980 Score = 32.3 bits (70), Expect = 0.091 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query: 227 KTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELLVLDWDRVTKNEVI 276 +T + LNPV+NE F+FEV A + + L V+D D+++ N+ I Sbjct: 319 RTKWLRHNLNPVYNEKFLFEVGAFES----NYDLVFKVVDHDKMSLNDSI 364 >SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces pombe|chr 1|||Manual Length = 767 Score = 30.3 bits (65), Expect = 0.37 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 188 RLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEV 247 R+ V ++ A L + D+ DP+ L +G++ T K+TLNP +NE+ FEV Sbjct: 9 RIRVTIVAADGLYKRDVFRFPDPFA--VLTVDGEQT--HTTTAIKKTLNPYWNET--FEV 62 Query: 248 PAAPNAAL 255 N+ + Sbjct: 63 NVTDNSTI 70 >SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces pombe|chr 2|||Manual Length = 786 Score = 30.3 bits (65), Expect = 0.37 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 183 QPAAARLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNES 242 + A R+ ++ A L + DL DP+ L +G++ T V K+++NP +NE Sbjct: 2 EQGAKRVRFYIVAADGLSKRDLFRQPDPFA--ILTVDGEQT--HTTKVIKKSVNPYWNEG 57 Query: 243 FVFEVPAAPNAAL 255 FEV P++ + Sbjct: 58 --FEVTVKPSSVI 68 >SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual Length = 380 Score = 30.3 bits (65), Expect = 0.37 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 59 VVSCQNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAG 118 +++C+ +PA P +Q+ P + H+V+ ++V C + + +T G P + Sbjct: 10 IINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVC--HTDAYTLSGKDPEGLFP 67 Query: 119 ITL 121 + L Sbjct: 68 VIL 70 >SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 585 Score = 29.5 bits (63), Expect = 0.64 Identities = 13/43 (30%), Positives = 22/43 (51%) Query: 18 VNSLYTPHLIYVYFDFYHPIFVVIQSCHLRYENEKNALVVSVV 60 + S + H I YF+++HP+F I EN + + S+V Sbjct: 139 IPSDFLEHYIEGYFEWFHPVFPFIHQASFNSENVAASFLRSLV 181 >SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 272 Score = 27.9 bits (59), Expect = 2.0 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248 L V + KA+NLP L G PY + G+ + + +T K+ P +N F +P Sbjct: 9 LVVRIWKAKNLPNKALVGKQSPYCVCRV---GEVVKRTQTD-KRSGQEPSWNAVLEFNIP 64 Query: 249 A 249 + Sbjct: 65 S 65 >SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharomyces pombe|chr 2|||Manual Length = 649 Score = 27.1 bits (57), Expect = 3.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 100 PVYDEDFTFYGIAPHQIAGITLHFVVL 126 PV +ED T G PHQI G +F ++ Sbjct: 553 PVLNEDQTVLGELPHQIRGFLHNFSLM 579 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.323 0.139 0.431 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,430,525 Number of Sequences: 5004 Number of extensions: 59215 Number of successful extensions: 109 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 97 Number of HSP's gapped (non-prelim): 14 length of query: 312 length of database: 2,362,478 effective HSP length: 73 effective length of query: 239 effective length of database: 1,997,186 effective search space: 477327454 effective search space used: 477327454 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (22.0 bits) S2: 54 (25.8 bits)
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