Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001589-TA|BGIBMGA001589-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR001565|Synaptotagmin,
IPR008973|C2 calcium/lipid-binding region, CaLB
(312 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 59 7e-10
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 43 5e-05
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 43 5e-05
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 32 0.091
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 30 0.37
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 30 0.37
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 30 0.37
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 29 0.64
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 28 2.0
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 3.4
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 59.3 bits (137), Expect = 7e-10
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
+TV ++KA +LP D G +DP+V L G+ + + KTH KRTLNP FNESF E+P
Sbjct: 1039 MTVDVIKATDLPAADSNGKSDPFVVFEL--QGEEVYRTKTH--KRTLNPTFNESFEVELP 1094
Query: 249 AAPNAALDHVSLELLVLDWDRVTKNEVIG 277
+ V DWD K++ +G
Sbjct: 1095 CKQTC-----NFVANVFDWDFGNKDDHLG 1118
Score = 29.1 bits (62), Expect = 0.85
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 204 LTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELL 263
L G DPYV ++ N K+ V T +PVFNE+F + N+ ++++LE
Sbjct: 451 LGGAVDPYV---VIKNSADRVIGKSKVAHNTGSPVFNETFY----SVLNSFSENLNLE-- 501
Query: 264 VLDWDRVTKNEVIG 277
V D++ + ++++G
Sbjct: 502 VYDFNDIRSDKLLG 515
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 43.2 bits (97), Expect = 5e-05
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
L +L +NLP D+ +DP+V + L NG+ K K V K+ LNPV+NE V
Sbjct: 1080 LHFMLQDGQNLPIGDIRS-SDPFVVLKL--NGESAFKSK--VIKKNLNPVWNEEADIVVQ 1134
Query: 249 AAPNAALDHVSLELLVLDWDRVTKNEVIG 277
N LD LEL+ DWD K +V+G
Sbjct: 1135 ---NRVLD--VLELVCYDWDMGEKPDVLG 1158
Score = 31.5 bits (68), Expect = 0.16
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 63 QNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAGITLH 122
QNLP + DP+V L+L + + K++V++K PV++E+ + +++ + L
Sbjct: 1088 QNLPIGDIRSSDPFVVLKL--NGESAFKSKVIKKNLNPVWNEEADI--VVQNRVLDV-LE 1142
Query: 123 FVVLSFDRYSRDEIIGEVVSPLSNLQLHSGEAMALCREIQPRSLKMRSAGRGEVLVSLCW 182
V +D + +++G SN+ L S E E Q +S+K+ S G + SL +
Sbjct: 1143 LVCYDWDMGEKPDVLG-----TSNIDLLSLEPNV---ESQ-QSIKLDSK-TGTINASLRF 1192
Query: 183 QPAAARLTVVL 193
P R VL
Sbjct: 1193 VPGWHRRKAVL 1203
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 195 KARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAA 254
+A +L + D+ GL+D Y+ + G+ + T V K+ LNP++NE + F +P P+
Sbjct: 477 RAEDLSKQDVNGLSDAYITVGFHKFGKPLYC--TRVVKQDLNPIWNE-YAF-IPVFPDQV 532
Query: 255 LDHVSLELLVLDWDRVTKNEVIGRLEL 281
+ + + D DR + ++V+GR ++
Sbjct: 533 KAGEKISIELWDSDRFSPDDVVGRTKI 559
Score = 34.7 bits (76), Expect = 0.017
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 91 TRVVRKTRCPVYDEDFTFYGIAPHQI-AGITLHFVVLSFDRYSRDEIIGEVVSPLSNLQL 149
TRVV++ P+++E + F + P Q+ AG + + DR+S D+++G L L
Sbjct: 508 TRVVKQDLNPIWNE-YAFIPVFPDQVKAGEKISIELWDSDRFSPDDVVGRTKIGLHLLIQ 566
Query: 150 HSGEAMALC 158
SG+ C
Sbjct: 567 DSGKMHERC 575
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 32.3 bits (70), Expect = 0.091
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 227 KTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELLVLDWDRVTKNEVI 276
+T + LNPV+NE F+FEV A + + L V+D D+++ N+ I
Sbjct: 319 RTKWLRHNLNPVYNEKFLFEVGAFES----NYDLVFKVVDHDKMSLNDSI 364
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 30.3 bits (65), Expect = 0.37
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 188 RLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEV 247
R+ V ++ A L + D+ DP+ L +G++ T K+TLNP +NE+ FEV
Sbjct: 9 RIRVTIVAADGLYKRDVFRFPDPFA--VLTVDGEQT--HTTTAIKKTLNPYWNET--FEV 62
Query: 248 PAAPNAAL 255
N+ +
Sbjct: 63 NVTDNSTI 70
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 30.3 bits (65), Expect = 0.37
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 183 QPAAARLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNES 242
+ A R+ ++ A L + DL DP+ L +G++ T V K+++NP +NE
Sbjct: 2 EQGAKRVRFYIVAADGLSKRDLFRQPDPFA--ILTVDGEQT--HTTKVIKKSVNPYWNEG 57
Query: 243 FVFEVPAAPNAAL 255
FEV P++ +
Sbjct: 58 --FEVTVKPSSVI 68
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 59 VVSCQNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAG 118
+++C+ +PA P +Q+ P + H+V+ ++V C + + +T G P +
Sbjct: 10 IINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVC--HTDAYTLSGKDPEGLFP 67
Query: 119 ITL 121
+ L
Sbjct: 68 VIL 70
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 18 VNSLYTPHLIYVYFDFYHPIFVVIQSCHLRYENEKNALVVSVV 60
+ S + H I YF+++HP+F I EN + + S+V
Sbjct: 139 IPSDFLEHYIEGYFEWFHPVFPFIHQASFNSENVAASFLRSLV 181
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 189 LTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVP 248
L V + KA+NLP L G PY + G+ + + +T K+ P +N F +P
Sbjct: 9 LVVRIWKAKNLPNKALVGKQSPYCVCRV---GEVVKRTQTD-KRSGQEPSWNAVLEFNIP 64
Query: 249 A 249
+
Sbjct: 65 S 65
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 100 PVYDEDFTFYGIAPHQIAGITLHFVVL 126
PV +ED T G PHQI G +F ++
Sbjct: 553 PVLNEDQTVLGELPHQIRGFLHNFSLM 579
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.139 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,430,525
Number of Sequences: 5004
Number of extensions: 59215
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 14
length of query: 312
length of database: 2,362,478
effective HSP length: 73
effective length of query: 239
effective length of database: 1,997,186
effective search space: 477327454
effective search space used: 477327454
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)
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