GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001588-TA|BGIBMGA001588-PA|undefined
         (171 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   1.7  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   3.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    22   8.8  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
          protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 50 SLSHKLGSKRCPDKALVFQPPRRATAVRSPGSATHY 85
          S++HK+ +KR   + L     RRAT  +S G    Y
Sbjct: 45 SIAHKISTKRQIREQLARTVHRRATRAKSIGLLRRY 80


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
          protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 16 GLETDTIWVMTVVLGTILLALCVGIACWI 44
          GLE   +WV  +VL  +++     + C +
Sbjct: 5  GLERTVLWVTVIVLVKVMVKSDAQVCCMV 33


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 24  VMTVVLGTILLALCVGIACWIVRFKSSLSHKLGSKRCPDKALVF 67
           +  VV+  +  A  + I CW++ F   L      K  P  AL+F
Sbjct: 246 IFVVVMKALRAASLITIECWVMPF---LQVFPSDKNNPRLALIF 286


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,856
Number of Sequences: 2123
Number of extensions: 3087
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 171
length of database: 516,269
effective HSP length: 60
effective length of query: 111
effective length of database: 388,889
effective search space: 43166679
effective search space used: 43166679
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)