Silkworm BLAST Result against rice

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001586-TA|BGIBMGA001586-PA|undefined
         (126 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1013 + 25305531-25305611,25305793-25305861,25306115-253062...    26   7.9  

>12_02_1013 +
           25305531-25305611,25305793-25305861,25306115-25306208,
           25306292-25306396,25306577-25306660,25306793-25306866,
           25307936-25308001,25308892-25308948,25309433-25309477,
           25309602-25309655,25310097-25310237
          Length = 289

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 53  EQPVREFRMEVPRKEAFVTRNGSV 76
           EQP  +F++E+P+  A+ T  G +
Sbjct: 192 EQPPEQFKIEIPKIPAYFTGTGDL 215


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.322    0.138    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,635,139
Number of Sequences: 37544
Number of extensions: 66552
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 1
length of query: 126
length of database: 14,793,348
effective HSP length: 74
effective length of query: 52
effective length of database: 12,015,092
effective search space: 624784784
effective search space used: 624784784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)