Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001584-TA|BGIBMGA001584-PA|IPR000533|Tropomyosin
(136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 114 2e-26
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 114 2e-26
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 114 2e-26
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 103 4e-23
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 103 4e-23
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 89 8e-19
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 89 8e-19
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 89 8e-19
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 89 8e-19
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 89 8e-19
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 89 8e-19
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 71 4e-13
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.095
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.095
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 33 0.095
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 32 0.12
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 31 0.29
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 31 0.29
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 29 0.88
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 29 1.2
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 29 1.5
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 2.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 2.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 2.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 2.0
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 28 2.7
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 28 2.7
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 2.7
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 2.7
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 2.7
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z32683-15|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 27 4.7
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z81063-7|CAB02957.2| 296|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF003140-7|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 26 8.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 26 8.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 26 8.2
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 26 8.2
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 26 8.2
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 26 8.2
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 114 bits (274), Expect = 2e-26
Identities = 57/128 (44%), Positives = 83/128 (64%)
Query: 6 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXX 65
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 66 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 125
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 126 SDKKYEEV 133
+D+KYEEV
Sbjct: 130 ADRKYEEV 137
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 114 bits (274), Expect = 2e-26
Identities = 57/128 (44%), Positives = 83/128 (64%)
Query: 6 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXX 65
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 66 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 125
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 126 SDKKYEEV 133
+D+KYEEV
Sbjct: 130 ADRKYEEV 137
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 114 bits (274), Expect = 2e-26
Identities = 57/128 (44%), Positives = 83/128 (64%)
Query: 6 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXX 65
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 66 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 125
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 126 SDKKYEEV 133
+D+KYEEV
Sbjct: 130 ADRKYEEV 137
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 103 bits (247), Expect = 4e-23
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 6 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXX 65
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 66 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 125
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + + I E
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHE 129
Query: 126 SDKKYEEV 133
++ K EEV
Sbjct: 130 TENKAEEV 137
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 103 bits (247), Expect = 4e-23
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 6 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXX 65
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 66 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 125
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + + I E
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHE 129
Query: 126 SDKKYEEV 133
++ K EEV
Sbjct: 130 TENKAEEV 137
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 89.4 bits (212), Expect = 8e-19
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 106
Query: 75 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 107 KIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 165
Score = 33.1 bits (72), Expect = 0.072
Identities = 23/122 (18%), Positives = 47/122 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 130
+ AT+KL E + E+E +L R + ++ + E +L A EE+
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNV 120
Query: 131 EE 132
+E
Sbjct: 121 DE 122
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 70.5 bits (165), Expect = 4e-13
Identities = 31/57 (54%), Positives = 45/57 (78%)
Query: 77 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EV
Sbjct: 18 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEV 74
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.095
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 77 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVI 134
A+A+ A + E+++KA ++ + R LEA QAKL +E+ + EE++
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELL 878
Score = 31.1 bits (67), Expect = 0.29
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 4 NMQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXX 63
N +Q ILD + KK+ Q+ ++L+ A++E+ A+++++
Sbjct: 126 NSEQN-ILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSS 184
Query: 64 XXXXXXXXXXXATATAKLSEASQAADES-ERIRKALE----NRTNMEDDRVAILEAQLSQ 118
+L + DE+ E +++ LE N +++E + +LE+ S+
Sbjct: 185 ETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSE 244
Query: 119 AKLIAEESD 127
K AE ++
Sbjct: 245 MKQHAEAAE 253
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.095
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 77 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVI 134
A+A+ A + E+++KA ++ + R LEA QAKL +E+ + EE++
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELL 878
Score = 31.1 bits (67), Expect = 0.29
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 4 NMQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXX 63
N +Q ILD + KK+ Q+ ++L+ A++E+ A+++++
Sbjct: 126 NSEQN-ILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSS 184
Query: 64 XXXXXXXXXXXATATAKLSEASQAADES-ERIRKALE----NRTNMEDDRVAILEAQLSQ 118
+L + DE+ E +++ LE N +++E + +LE+ S+
Sbjct: 185 ETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSE 244
Query: 119 AKLIAEESD 127
K AE ++
Sbjct: 245 MKQHAEAAE 253
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 32.7 bits (71), Expect = 0.095
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXX 74
K+K+ + HKR ++ + R + E+ LNR +
Sbjct: 1252 KRKIHEAHLMEIQANLAESDEHKRTLIDQLER--SRDELDHLNRVREEEEHAFANMQRRL 1309
Query: 75 ATATAKLSEASQAADESERIRKALENRT-NMEDDRVAILE 113
ATA ++ E ++ E R++ A NR +ED++ A+L+
Sbjct: 1310 ATAEGQIQELNEQIQEETRLKIANINRARQLEDEKNALLD 1349
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 90 ESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
+ E+ RK LE R N E R Q ++ + +AEE K YEE
Sbjct: 156 DREKKRKMLEERANEEKRRSTEALVQAAEKRKLAEEFAKNYEE 198
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 31.1 bits (67), Expect = 0.29
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 75 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 134 IA 135
++
Sbjct: 471 LS 472
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 31.1 bits (67), Expect = 0.29
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 75 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 134 IA 135
++
Sbjct: 471 LS 472
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 29.5 bits (63), Expect = 0.88
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 88 ADESERIRKALENRTNMEDDRVAILE--AQL--SQAKLIAEESDKKYEE 132
A+ ++ +A E+R E+DR+A+LE +QL +A+L ++SD K E
Sbjct: 175 AELERKVLEAEESRKKFEEDRLAMLEQKSQLERDRAELARQKSDMKKNE 223
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 76 TATAKLSEASQAADESERIRKALENRTNMEDDRVAI--LEAQLSQAKLIAEESDKKYEE 132
+A ++ + +A E+E + E + E+ R LEA+L + L AEES KK+EE
Sbjct: 135 SARNEMEKMLRAQIEAEMAVELAECKKRDEESRKKCKQLEAELERKVLEAEESRKKFEE 193
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 15 KKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRI 60
+KKM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 47 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRM 92
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/99 (17%), Positives = 38/99 (38%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
+D +KKKM+ ++++ + E E E+ +++
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKA 60
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRV 109
+ AT+KL E + E+E +L R + ++ +
Sbjct: 61 QEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEEL 99
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 39 LQVEIMRREEAESEVAALNRRIQ-XXXXXXXXXXXXXATATAKLSEASQAADESERIRKA 97
LQ+++ R E + E+ N+R++ + L E S+ +E +R++K
Sbjct: 40 LQIQVHRSETYKMEIEEANKRLRLQYEALQRDYEETMQERSIVLEENSRQNEERDRLQKE 99
Query: 98 LENRTNMEDDRVAILEAQLSQAK 120
+E + + + VA L+ +L +
Sbjct: 100 IE-KMKEDSEEVAALKQKLENTR 121
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 38 RLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESER 93
RLQ EI + +E EVAAL ++++ A A A+ A E+E+
Sbjct: 95 RLQKEIEKMKEDSEEVAALKQKLENTRRLLKVNMEETAQANARKEAAIARLTEAEQ 150
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 KRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRK 96
+R ++E+ RRE + E +R++ A +++ + A+E ER+RK
Sbjct: 476 ERQELELQRREAEDRE----RQRLEDEAREMRRREEERREAEL-VADVHRQAEERERLRK 530
Query: 97 ALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
E +R+ + + ++ ++ AE +++ +E
Sbjct: 531 RQEREEAERLERIRLEQQKIDMERIDAERRERERKE 566
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 KRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRK 96
+R ++E+ RRE + E +R++ A +++ + A+E ER+RK
Sbjct: 476 ERQELELQRREAEDRE----RQRLEDEAREMRRREEERREAEL-VADVHRQAEERERLRK 530
Query: 97 ALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
E +R+ + + ++ ++ AE +++ +E
Sbjct: 531 RQEREEAERLERIRLEQQKIDMERIDAERRERERKE 566
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 KRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRK 96
+R ++E+ RRE + E +R++ A +++ + A+E ER+RK
Sbjct: 476 ERQELELQRREAEDRE----RQRLEDEAREMRRREEERREAEL-VADVHRQAEERERLRK 530
Query: 97 ALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
E +R+ + + ++ ++ AE +++ +E
Sbjct: 531 RQEREEAERLERIRLEQQKIDMERIDAERRERERKE 566
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 KRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRK 96
+R ++E+ RRE + E +R++ A +++ + A+E ER+RK
Sbjct: 476 ERQELELQRREAEDRE----RQRLEDEAREMRRREEERREAEL-VADVHRQAEERERLRK 530
Query: 97 ALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
E +R+ + + ++ ++ AE +++ +E
Sbjct: 531 RQEREEAERLERIRLEQQKIDMERIDAERRERERKE 566
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 43 IMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRT 102
+M E E A R IQ + A + ADE+ + L+N
Sbjct: 332 VMLSRAVEDEKFAKERLIQEARSRIEQYENRLLQMQGEFDHAKREADENREEAQRLKNEL 391
Query: 103 NMED-DRVAILEAQLSQAKLIAEESDKKYEEV 133
+ D R +A++ +A+L A +++++ ++
Sbjct: 392 ALRDASRTQTDDARVKEAELKATAAEERFNKM 423
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 43 IMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRT 102
+M E E A R IQ + A + ADE+ + L+N
Sbjct: 332 VMLSRAVEDEKFAKERLIQEARSRIEQYENRLLQMQGEFDHAKREADENREEAQRLKNEL 391
Query: 103 NMED-DRVAILEAQLSQAKLIAEESDKKYEEV 133
+ D R +A++ +A+L A +++++ ++
Sbjct: 392 ALRDASRTQTDDARVKEAELKATAAEERFNKM 423
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 98 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVI 134
+E R +DR+ ILE L +K ++ KKY++ +
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEV 768
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 98 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVI 134
+E R +DR+ ILE L +K ++ KKY++ +
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEV 768
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 98 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVI 134
+E R +DR+ ILE L +K ++ KKY++ +
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEV 768
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 92 ERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
E +RK R N+E R L+ L K E ++KK+EE+
Sbjct: 106 EDVRKVELQRANLEKQRTEALDIHLETMK---ELNEKKFEEI 144
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 27.1 bits (57), Expect = 4.7
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 35 YHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERI 94
Y L++E++ ES +RI+ ++ AA ES++
Sbjct: 101 YQTFLRIELLVANLGESTDPENEKRIKNLMPAAKTGIPPEGVLRLTINALDSAARESKKK 160
Query: 95 RKALENRTNMEDDRVAILEAQLSQAKLIAEESDK-KYEEVI 134
A+E+ T DD + E + K + E DK ++EE +
Sbjct: 161 TMAIESLTKQVDDANKLTEVYM---KRLEELEDKHRFEEAL 198
>Z32683-15|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 48 EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDD 107
+AE E A +R++ ++ + + DE E + + L+N +D
Sbjct: 209 DAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDNIEKQKDR 268
Query: 108 RVAILEAQLSQAKLIAEESDKKYEEV 133
+ + E + + A +E D +EEV
Sbjct: 269 KGSKDETEDTDA--TGDEEDSMFEEV 292
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 48 EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDD 107
+AE E A +R++ ++ + + DE E + + L+N +D
Sbjct: 209 DAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDNIEKQKDR 268
Query: 108 RVAILEAQLSQAKLIAEESDKKYEEV 133
+ + E + + A +E D +EEV
Sbjct: 269 KGSKDETEDTDA--TGDEEDSMFEEV 292
>Z81063-7|CAB02957.2| 296|Caenorhabditis elegans Hypothetical
protein F15D3.8 protein.
Length = 296
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 80 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAE-ESDKKYEE 132
K+ E +Q + E R++LEN M+D R IL + A LI + E + K E
Sbjct: 10 KMEEDAQRRHQ-ELNRQSLENAAEMKDSRRKILNKEFEGAILIKQVEHETKQVE 62
>AF003140-7|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 89 DESERIRKALENRTNM-EDDRVAILEAQLSQAKLIAEESDKKYEE 132
++SE +KA +N D +V + EA+LS L EE +K + E
Sbjct: 275 NDSEGAQKAWDNAVAAGTDGKVILQEAELSARVLDGEEEEKYWTE 319
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/106 (16%), Positives = 38/106 (35%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
L+ +KK+ KR++ + + EEAE L +
Sbjct: 620 LETIKKESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTK 679
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 116
+ KL+E++ +E + + + N + + V L A++
Sbjct: 680 ESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEM 725
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/106 (16%), Positives = 38/106 (35%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
L+ +KK+ KR++ + + EEAE L +
Sbjct: 622 LETIKKESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTK 681
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 116
+ KL+E++ +E + + + N + + V L A++
Sbjct: 682 ESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEM 727
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 26.2 bits (55), Expect = 8.2
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 45 RREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADE--SERIRKALENRT 102
R E+AE + N R+Q ++ EA + AD+ + IR+A E+
Sbjct: 511 RAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVR 570
Query: 103 NMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
M+ + Q + + E+ D E+
Sbjct: 571 VMKREMTEASITSDRQIQSLKEKVDSLTREL 601
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 26.2 bits (55), Expect = 8.2
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 45 RREEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADE--SERIRKALENRT 102
R E+AE + N R+Q ++ EA + AD+ + IR+A E+
Sbjct: 511 RAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVR 570
Query: 103 NMEDDRVAILEAQLSQAKLIAEESDKKYEEV 133
M+ + Q + + E+ D E+
Sbjct: 571 VMKREMTEASITSDRQIQSLKEKVDSLTREL 601
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/106 (16%), Positives = 38/106 (35%)
Query: 11 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 70
L+ +KK+ KR++ + + EEAE L +
Sbjct: 622 LETIKKESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTK 681
Query: 71 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 116
+ KL+E++ +E + + + N + + V L A++
Sbjct: 682 ESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEM 727
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 26.2 bits (55), Expect = 8.2
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 80 KLSEASQAADESER-IRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 132
K E + + ER IR+ +E + EDDR+A A+L A+ + E+D+K E
Sbjct: 1011 KEREKREEKERKEREIREIMERKKREEDDRIA---AKLQIAQQL--ENDRKMRE 1059
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 26.2 bits (55), Expect = 8.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 79 AKLSEASQAADESERIRKALENRTNMED------DRVAILEAQLSQAKLIAEESDKK 129
A+L +A QAA +++ + + + E + A EAQL+Q IAEE KK
Sbjct: 1229 AQLIQALQAAKDAQTAKLVAQEKAKKEAQEKARREAEAKKEAQLAQLMKIAEERSKK 1285
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.121 0.294
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,857,210
Number of Sequences: 27539
Number of extensions: 45487
Number of successful extensions: 287
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 72
length of query: 136
length of database: 12,573,161
effective HSP length: 74
effective length of query: 62
effective length of database: 10,535,275
effective search space: 653187050
effective search space used: 653187050
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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