GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001583-TA|BGIBMGA001583-PA|undefined
         (244 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.67 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.67 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   2.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   4.7  
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            23   6.2  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 40  HVHGRTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTD 84
           H H         HQHHP+    +QP+P T+P    S   T   +D
Sbjct: 97  HPHHHQLPHHPHHQHHPQ----QQPSPQTSPPASISFSITNILSD 137


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 40  HVHGRTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTD 84
           H H         HQHHP+    +QP+P T+P    S   T   +D
Sbjct: 97  HPHHHQLPHHPHHQHHPQ----QQPSPQTSPPASISFSITNILSD 137


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 68  TNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSN 112
           T    E SA+ T T T D    + S SES D+  +  D AL + N
Sbjct: 239 TTDSIEKSAKPT-TNTSDAQLELTSSSESNDLVTSIIDTALVDDN 282


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 2/119 (1%)

Query: 47   VRRRGHQHHPRLRGDRQPAPATN-PDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSD 105
            +RR     +   R   Q   A   P P PS RT   +  + +  V  + E Q   R    
Sbjct: 1055 LRRYNETRNAARRAATQQRQAERLPPPPPSPRTERRREVNRL-AVARLRERQRAARAEMH 1113

Query: 106  DALSNSNLTVAEDCANDEQENELDRVKSTXXXXXXXXXXXXXXRSAGDGAEAIVAALPS 164
             A   +    ++D  +D +  +     ST               +  + A A+ A L S
Sbjct: 1114 GAYQPAPSNDSDDDDDDVENRQATNAASTSEAARTAAEESRVGLTEAEAAAAVEAELSS 1172


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 50 RGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVV 87
          RG   H +   + Q  P TNP  + +   ++   D V+
Sbjct: 30 RGRMTHDQFNINLQTGPNTNPRDDTALHISIRPRDGVI 67


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.127    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,850
Number of Sequences: 2123
Number of extensions: 6330
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 7
length of query: 244
length of database: 516,269
effective HSP length: 62
effective length of query: 182
effective length of database: 384,643
effective search space: 70005026
effective search space used: 70005026
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)