GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001582-TA|BGIBMGA001582-PA|undefined
         (88 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.16 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.21 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.21 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   1.9  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.6 bits (51), Expect = 0.16
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 7   KMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 66
           KM   K +KD   D+ A+ + + +      EKA+ +   + K   TIEN L     S   
Sbjct: 70  KMVKQKHKKDIRADKKALQKLRRE-----VEKAKRDLSSVHKTTLTIENLLADYDFSETL 124

Query: 67  VNGKLEE 73
              K EE
Sbjct: 125 TRAKFEE 131


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.21
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 49   KIQTIENE-LDQTQESLMQVNGKLEEKEK 76
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.21
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 49   KIQTIENE-LDQTQESLMQVNGKLEEKEK 76
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 20 DRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKL 71
          D+  +C   A      +E +EE    L   I  I+ E D+        NG++
Sbjct: 3  DKIILCLVYATCVYSVSEISEETCETLMSDINLIKEEFDELGRLQRICNGEV 54


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.121    0.300 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010
Number of Sequences: 317
Number of extensions: 389
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 88
length of database: 114,650
effective HSP length: 47
effective length of query: 41
effective length of database: 99,751
effective search space:  4089791
effective search space used:  4089791
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.5 bits)
S2: 37 (19.0 bits)