GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001581-TA|BGIBMGA001581-PA|IPR000953|Chromo,
IPR008676|MRG
         (307 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         31   0.031
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         31   0.031
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    28   0.38 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    28   0.38 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   1.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.7  
Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    24   4.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   6.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   6.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.2  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 31.5 bits (68), Expect = 0.031
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 77  HSAQ-PTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKK 118
           HS+Q PT T  +  + ++P PA TT T +  T   S +  P +
Sbjct: 20  HSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTR 62


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 31.5 bits (68), Expect = 0.031
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 77  HSAQ-PTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKK 118
           HS+Q PT T  +  + ++P PA TT T +  T   S +  P +
Sbjct: 20  HSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTR 62


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 55  PESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPAD 110
           P+S   +++E   Q+Q + Q+ H  QP            P PA++ K ++K  PA+
Sbjct: 463 PDSGTDRHSEKQQQQQSQHQQQHQHQP---------GGGPLPAQSAKQRTKSKPAE 509



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 78  SAQPTKTKKIKESDST-PAPAKTTKTQSKDTPADSGSDQPKK 118
           S QPT +     S S+ P+P +  +  S D P  S S   ++
Sbjct: 5   SQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRR 46


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 55  PESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPAD 110
           P+S   +++E   Q+Q + Q+ H  QP            P PA++ K ++K  PA+
Sbjct: 463 PDSGTDRHSEKQQQQQSQHQQQHQHQP---------GGGPLPAQSAKQRTKSKPAE 509



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 78  SAQPTKTKKIKESDST-PAPAKTTKTQSKDTPADSGSDQPKK 118
           S QPT +     S S+ P+P +  +  S D P  S S   ++
Sbjct: 5   SQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRR 46


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 104 SKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIP 144
           SK++ +  G+D  ++    LDL I S +++L  V   ++IP
Sbjct: 180 SKNSLSPGGTDNGRRTPTWLDLDIYSMQKFLETVAGPLRIP 220


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 81  PTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQP 116
           PT T ++    STP   +TT +Q    P +   + P
Sbjct: 323 PTTTHRLAARTSTPPDPETTSSQQCHPPVNDTLEAP 358


>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 44  AGWNKNWDEWVPESRVLKYNEANVQRQKEVQRAH 77
           AG+      W+P     +Y E NVQ Q   +++H
Sbjct: 169 AGFTTGSKTWLPVGD--RYREVNVQAQLAAEKSH 200


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 89  ESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELK 148
           ES++TP          K+    S   Q +  + +    +    ++   V V  K  E+ K
Sbjct: 220 ESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSEFSFTVGVVSKKREQPK 279

Query: 149 VWLVD 153
            W++D
Sbjct: 280 SWIID 284


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 55  PESRVLKY-NEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQS 104
           P+ + LK+ +EA+      +  A +  P   +      + PAPAKTT T S
Sbjct: 913 PKKQNLKFIDEASTPSTSAM--AATIVPNPVQASPSPATAPAPAKTTSTDS 961


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 83  KTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKI 141
           + K++KE D      +    + +   AD    + KK+ G++   +  +EQ + +VE ++
Sbjct: 244 EAKRLKE-DQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEM 301


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 52  EWVPES-RVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPAD 110
           ++ PES ++L  N     +Q++ Q+    Q  + ++ ++ +S  A    T+ + + +  D
Sbjct: 885 DYEPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLA----TQQRLEASQMD 940

Query: 111 SGSDQPKKK 119
            G+DQP ++
Sbjct: 941 QGTDQPMQE 949


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,380
Number of Sequences: 2123
Number of extensions: 12429
Number of successful extensions: 46
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 13
length of query: 307
length of database: 516,269
effective HSP length: 64
effective length of query: 243
effective length of database: 380,397
effective search space: 92436471
effective search space used: 92436471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)