Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001581-TA|BGIBMGA001581-PA|IPR000953|Chromo,
IPR008676|MRG
(307 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g37280.1 68417.m05276 MRG family protein contains Pfam domain... 194 6e-50
At1g02740.1 68414.m00227 MRG family protein member of Pfam PF057... 105 4e-23
At5g06670.1 68418.m00753 kinesin motor protein-related 40 0.002
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 36 0.045
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 33 0.18
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 33 0.18
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 32 0.42
At1g74890.1 68414.m08681 two-component responsive regulator / re... 32 0.42
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 32 0.56
At2g19710.1 68415.m02303 expressed protein contains Pfam profi... 31 0.97
At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing ... 31 1.3
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 31 1.3
At5g59910.1 68418.m07513 histone H2B nearly identical to histone... 30 1.7
At5g23900.1 68418.m02807 60S ribosomal protein L13 (RPL13D) 30 1.7
At3g49010.2 68416.m05354 60S ribosomal protein L13 (RPL13B) / br... 30 1.7
At3g49010.1 68416.m05353 60S ribosomal protein L13 (RPL13B) / br... 30 1.7
At3g46030.1 68416.m04980 histone H2B, putative strong similarity... 30 1.7
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 30 1.7
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR... 30 1.7
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR... 30 1.7
At5g62260.1 68418.m07817 AT hook motif-containing protein contai... 30 2.2
At5g57210.1 68418.m07147 microtubule-associated protein-related ... 30 2.2
At4g13380.1 68417.m02091 heavy-metal-associated domain-containin... 30 2.2
At5g62550.1 68418.m07850 expressed protein 29 3.0
At5g47220.1 68418.m05822 ethylene-responsive element-binding fac... 29 3.0
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot... 29 3.0
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 29 3.0
At3g45980.1 68416.m04975 histone H2B identical to histone H2B Ar... 29 3.0
At3g28770.1 68416.m03591 expressed protein 29 3.0
At1g54960.1 68414.m06277 NPK1-related protein kinase, putative (... 29 3.0
At4g09290.1 68417.m01537 hypothetical protein 29 3.9
At3g49970.1 68416.m05464 phototropic-responsive protein, putativ... 29 3.9
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 3.9
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 29 3.9
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 29 3.9
At5g28250.1 68418.m03425 Ulp1 protease family protein contains P... 29 5.2
At3g14860.2 68416.m01879 NHL repeat-containing protein contains ... 29 5.2
At3g14860.1 68416.m01878 NHL repeat-containing protein contains ... 29 5.2
At2g33400.1 68415.m04094 expressed protein 29 5.2
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 29 5.2
At2g14830.1 68415.m01680 expressed protein contains Pfam profile... 29 5.2
At1g77130.1 68414.m08985 glycogenin glucosyltransferase (glycoge... 29 5.2
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 29 5.2
At5g41140.1 68418.m05001 expressed protein 28 6.8
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 28 6.8
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 28 6.8
At2g47910.2 68415.m05988 expressed protein 28 6.8
At2g47910.1 68415.m05987 expressed protein 28 6.8
At5g43720.1 68418.m05345 expressed protein 28 9.0
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide... 28 9.0
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 28 9.0
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 28 9.0
At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containi... 28 9.0
At2g22795.1 68415.m02704 expressed protein 28 9.0
At2g19400.1 68415.m02263 protein kinase, putative contains prote... 28 9.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 9.0
At1g51880.1 68414.m05848 leucine-rich repeat protein kinase, put... 28 9.0
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 28 9.0
At1g27620.1 68414.m03373 transferase family protein similar to h... 28 9.0
>At4g37280.1 68417.m05276 MRG family protein contains Pfam domain
PF05712: MRG
Length = 320
Score = 194 bits (473), Expect = 6e-50
Identities = 105/282 (37%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Query: 7 FAEGEKVLCFHGPLIYEAKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVPESRVLKYNEAN 66
F+EGE+VL +HGP +Y AK K + K K +Y +HY GWNKNWDEWV R+LK+ E N
Sbjct: 29 FSEGERVLAYHGPRVYGAKVQKVELRK-KEWKYFVHYLGWNKNWDEWVSADRLLKHTEEN 87
Query: 67 VQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLS 126
+ +QK + + + TK + + + + TK DT ++ + +K S
Sbjct: 88 LVKQKALDKKQGVE-KGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHE-----S 141
Query: 127 IESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKS 186
++ A+ +KI+IP LK L DDW+ I ++ K+ LP V +I+ YL FK
Sbjct: 142 GNEKDNVTAEKLMKIQIPASLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFK-- 199
Query: 187 SKSHNQAKESVLVDITEGIKEYFNATLGSQLLYKFERPQYSEILQEYPDTPMSQVYGAVH 246
+K +SV +I +GI+ YF+ L LLYK ER QY E + + DT S VYGA H
Sbjct: 200 TKKDGMVTDSV-AEILKGIRSYFDKALPVMLLYKKERRQYQESIVD--DTSPSTVYGAEH 256
Query: 247 LLRLFAKMGPMLAYTALDEKSLHHVLSHIQDFLKYMVTNRST 288
LLRLF K+ + +Y ++E++ + + DFLK++ N+ST
Sbjct: 257 LLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQST 298
>At1g02740.1 68414.m00227 MRG family protein member of Pfam PF05712:
MRG; similar to Transcription factor-like protein MRG15
(MORF-related gene 15 protein) (MSL3-1 protein) (Protein
HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens}
Length = 316
Score = 105 bits (252), Expect = 4e-23
Identities = 93/293 (31%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 2 APKLKFAEGEKVLCFHGPLIYEAKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVPESRVLK 61
AP F EGE+VL H YEAK LK KD +Y +HY V +
Sbjct: 47 APPGHFEEGERVLAKHSDCFYEAKVLKVEF-KDNEWKYFVHYI--------------VSR 91
Query: 62 YNEANVQRQKEV----QRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPK 117
Y E N+++QKE Q SA K K+K A + K S DT D+
Sbjct: 92 YYE-NIEKQKEQGLKQQGIKSAMAWKVSKMKPRSPNVARGRKRKQDSVDTVIAPLVDEK- 149
Query: 118 KKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIV 177
++ + L+ IP L+ L+DD++ +T+ QKL LP V I+
Sbjct: 150 --------NVLPSDNLLS-----FNIPPALRKQLLDDFEFVTQMQKLVQLPRSPNVDGIL 196
Query: 178 DNYLAFKKSSKSHNQAKESVLVDITEGIKEYFNATLGSQLLYKFERPQYSEILQEYPDTP 237
Y+ K H + +S L +I +G++ YF+ L LLY ER QY E +
Sbjct: 197 KKYI--DSQMKKHGRVTDS-LEEILKGLRCYFDKALPVMLLYNNERKQYEESVSG--GVS 251
Query: 238 MSQVYGAVHLLRLFAKMGPMLAYTALDEKSLHHVLSHIQDFLKYMVTNRSTLF 290
S VYGA HLLRLF K+ +L + + E++L + + D L+ N+S LF
Sbjct: 252 PSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILR---KNQSVLF 301
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 40.3 bits (90), Expect = 0.002
Identities = 46/221 (20%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 3 PKLKFAEGEKVLCFHGPLIYEAKCLKSSVTKDKHVRYLIHYAGWNKNWDE-WVPESRVLK 61
P+ + + GE+ L HG L Y + +T D+++ + G + D+ ++ E + K
Sbjct: 493 PRRRHSFGEEELIMHGQLAY-LPHKRRDLTDDENLELYVSREGTPEIIDDAFIEEKKTRK 551
Query: 62 YNEAN--VQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKK 119
+ N ++K+ S+ K+ +K S+STP+ T + + D +S +
Sbjct: 552 HGLLNWLKIKKKDSSLGGSSLSDKSSAVK-SNSTPS---TPQGEGSDFHTESRLSEGSAL 607
Query: 120 RGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDN 179
++ ++E+ E + +I+ P E ++ ++D +++ QQK L ++
Sbjct: 608 ADQIIETMENREAHEDSFH-EIETP-ETRIKMIDQMEILREQQK--TLSEEMAQQSRSFK 663
Query: 180 YLAFKKSSKSHNQAKESVLVDITEGIKEYFN--ATLGSQLL 218
L+ + + N+ ++ ++++ IK + ATLG Q+L
Sbjct: 664 LLSEEAAKAPQNEEIKAEIINLNGDIKAKNDQIATLGKQIL 704
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 35.5 bits (78), Expect = 0.045
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 47 NKNWDEWVPESRVLKYNEANVQ---RQKEVQRAHSAQPTKTKKIKESDST----PAPAKT 99
NK V E +K +A ++ ++K+ ++ + T+ +K+KE+D+ K
Sbjct: 97 NKETKVEVTEEEKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKK 156
Query: 100 TKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVIT 159
K++SK AD ++ KKR R + EE E K + EE +V+
Sbjct: 157 KKSKSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEE---------NVVE 207
Query: 160 RQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDITEGIKEY 208
+ + P K T ++ +N A K +KS NQ L + E K +
Sbjct: 208 NDEGVQETPVKETETK--ENGNAEKSETKSTNQKSGKGLSNSKEPKKPF 254
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 33.5 bits (73), Expect = 0.18
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 85 KKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIP 144
KK E S P T KT K+ D D+PKK+ ++ E++ K + KIK
Sbjct: 201 KKHSEFISYPIYLWTEKTTEKEISDDEDEDEPKKENEGEVEEVDEEKEKDGKKKKKIK-- 258
Query: 145 EELKVWLVDDWDVITRQQKLAI-LPAKLTVSQIVDNYLAFKKS 186
E+ +W++I +Q+ + + P ++T + Y AF KS
Sbjct: 259 -EVS----HEWELINKQKPIWLRKPEEIT----KEEYAAFYKS 292
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 180 YLAFKKSSKSHNQAKESVLVDITEGIKEYFNATLGSQLLYKFERPQYSEILQEYPDTPMS 239
YL+ + ++ + S ++DI + I+E N L+ FE P + + +++P P+S
Sbjct: 216 YLSNQNATDLFQEPNNSTMIDIGQQIEEGNNGYAHQPLIDPFELPNHHQ--EQFPSVPIS 273
Query: 240 QVY 242
Q Y
Sbjct: 274 QNY 276
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 76 AHSAQPTKTKKIKESDST--PAPAKTTKTQSKDTPADSGSDQPK--KKRGRLDLSIESEE 131
A + + + +K K DS+ PAP T K+++K+ + ++ K KK+ + D E EE
Sbjct: 431 AENGEAGEARKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEE 490
Query: 132 Q 132
+
Sbjct: 491 E 491
>At1g74890.1 68414.m08681 two-component responsive regulator /
response regulator 15 (ARR15) identical to response
regulator 15 GI:11870065 from [Arabidopsis thaliana];
contains Pfam profile: PF00072 response regulator
receiver domain
Length = 206
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 65 ANVQRQKE-VQRAHSAQPTKTKKIK-------ESDSTPAPAKTTKTQSKDTPADSGSDQP 116
A+V+R KE + R A+ KTKK+ + DS+P+ + T+ + S + D P
Sbjct: 136 ADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSSSHDVSSLDDDTP 195
Query: 117 KKKRGRLD 124
KR +L+
Sbjct: 196 SSKRIKLE 203
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 48 KNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPA--PAKTTKTQSK 105
+N DE E + + NEA + ++E + + + E+D+ A + KT+SK
Sbjct: 184 ENVDEDDKEEALKEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVAEPEVEDKKTESK 243
Query: 106 DTPADSGSDQPKKKRGRLDLSIESEEQ 132
D D ++ +K +D + +E+
Sbjct: 244 DENEDKEEEKEDEKEESMDDKEDEKEE 270
>At2g19710.1 68415.m02303 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 937
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 70 QKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGR 122
Q + HS T K KES P+P T + T D P ++R R
Sbjct: 858 QSKANEKHSLPVTTKKTDKESHDQPSPRTVTSSHVPQTVKSPDPDTPSRERER 910
>At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 501
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 54 VPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGS 113
+P+ + K ++ N + ++E + P KTKK K+ +T S + +SG
Sbjct: 58 IPDEK--KGDKRNAENEEEEEETDL--PVKTKKSKKEKKLTDSGDEKETIS-EAVEESGL 112
Query: 114 DQPKKKRGRLDLSIESEEQYLAKVEVKIK 142
+KKR R ++ E E + VE+K K
Sbjct: 113 VSKRKKRKRDEIENEYETKKYGSVEMKEK 141
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 63 NEANVQRQKEVQRAHSAQPTKTKKIKE--SDSTPAPAKTTKTQSKDTPADSGSD 114
++ NV +KEV + S T K D+ +KTT + S + P+DS SD
Sbjct: 753 SKVNVNNKKEVVKKISNSVTANKITTNFFKDAEEDESKTTSSDSSNAPSDSSSD 806
>At5g59910.1 68418.m07513 histone H2B nearly identical to histone
H2B Arabidopsis thaliana GI:2407802; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 71 KEVQRAHSAQPTKTKKIKE-SDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIES 129
K ++ +P K ++E S + APA+ K P ++G+ KKK+ + S+E+
Sbjct: 4 KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMK-KKSVET 62
Query: 130 EEQYLAKV 137
+ Y+ KV
Sbjct: 63 YKIYIFKV 70
>At5g23900.1 68418.m02807 60S ribosomal protein L13 (RPL13D)
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 56 ESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAP-AKTTKTQSKDTPADS 111
++R L+ ++NVQR K + P +++++K DSTP A T+ Q P S
Sbjct: 101 KNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIAS 157
>At3g49010.2 68416.m05354 60S ribosomal protein L13 (RPL13B) /
breast basic conserved protein 1-related (BBC1)
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 56 ESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAP-AKTTKTQSKDTP 108
++R L+ + NVQR K + P + +K+K DSTP A T+ Q P
Sbjct: 101 KNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLP 154
>At3g49010.1 68416.m05353 60S ribosomal protein L13 (RPL13B) /
breast basic conserved protein 1-related (BBC1)
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 56 ESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAP-AKTTKTQSKDTP 108
++R L+ + NVQR K + P + +K+K DSTP A T+ Q P
Sbjct: 101 KNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLP 154
>At3g46030.1 68416.m04980 histone H2B, putative strong similarity to
histone H2B Arabidopsis thaliana GI:2407802, Gossypium
hirsutum SP|O22582, Lycopersicon esculentum GI:3021489;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 145
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 80 QPTKTKKIKE-SDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKV 137
+P + K ++E S + APA+ K P ++G+ KKK+ + S+E+ + Y+ KV
Sbjct: 8 KPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMK-KKSVETYKIYIFKV 65
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 38 RYLIHYAGWNKN-WDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESD 91
+YL+ G K W E P +LKY E V+ K + A+S KT K D
Sbjct: 585 QYLLKQGGMIKETWMEEDPREAILKYAEVAVKDPKFIAPAYSQTQPKTIFAKSDD 639
>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 57 SRVLKYNEANVQ-RQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQ 115
SR Y+++ + R + V R+ S ++++ K S +PAK+T ++S + S S
Sbjct: 205 SRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKST-SRSPGPRSKSRSPS 263
Query: 116 PKKKRGR 122
P++ R R
Sbjct: 264 PRRSRSR 270
>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 57 SRVLKYNEANVQ-RQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQ 115
SR Y+++ + R + V R+ S ++++ K S +PAK+T ++S + S S
Sbjct: 205 SRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKST-SRSPGPRSKSRSPS 263
Query: 116 PKKKRGR 122
P++ R R
Sbjct: 264 PRRSRSR 270
>At5g62260.1 68418.m07817 AT hook motif-containing protein contains
Pfam PF03479: Domain of unknown function (DUF296);
contains Pfam PF02178: AT hook motif; similar to AT-Hook
DNA-Binding Protein SAP1 protein (GI:4165183)
[Antirrhinum majus]; similar to AT-hook protein 2,
Arabidopsis thaliana, EMBL:ATAJ4119
Length = 441
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 95 APAKTTKTQSKDTPADSGSDQPKKKRGR 122
AP TT T T A +GSD KKKRGR
Sbjct: 55 APVPTTVTPGSAT-ASTGSDPTKKKRGR 81
>At5g57210.1 68418.m07147 microtubule-associated protein-related
contains some similarity to microtubule-associated
protein GI:5032258 from [Arabidopsis thaliana]; contains
Pfam profile PF00566: TBC domain
Length = 737
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 53 WVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIK----ESDSTPAPAKTTKTQSKDTP 108
W + RVL E +R+K +QR + + + ++++K ++S P+PA+ ++ +K
Sbjct: 496 WEEKWRVLNSAEEEERRKKALQRPKAGKKSWSERVKLRLSRTESDPSPAEAKRSGNKPHI 555
Query: 109 ADSGSDQPKKKRGRLDL 125
S D ++ G ++
Sbjct: 556 RRSLLDDLSRQLGEKEI 572
>At4g13380.1 68417.m02091 heavy-metal-associated domain-containing
protein low similarity to wound-responsive gene KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF00403: Heavy-metal-associated domain
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 56 ESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQ 115
++ +L NE V+++ VQ + Q T TKK +E D +T + + K D+
Sbjct: 22 KAEILTMNE-KVEKEDVVQNEANEQETVTKKNEEGDIVDKKDETPEVEEK-------IDK 73
Query: 116 PKKKRGRLDLSIE-SEEQYLAKVEVKIKIPEELKVWLVD 153
P+ +L++ I E+Y A + I E +K VD
Sbjct: 74 PETSTRKLEIHIAFLSEKYEADIGKVISKFEGVKTCKVD 112
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 82 TKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESE 130
T TK KE D+ + T T+ KD DS + K+ G L S +E
Sbjct: 267 TVTKTTKEKDALQDSSVTETTKEKDALQDSSVTETSKEEGALQDSSVTE 315
>At5g47220.1 68418.m05822 ethylene-responsive element-binding factor
2 (ERF2) identical to SP|O80338 Ethylene responsive
element binding factor 2 (AtERF2) [Arabidopsis thaliana]
Length = 243
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 87 IKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEE 146
++ + P P + T +S + + S S + G+L ++E V+VK ++ +E
Sbjct: 175 LRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVGDE 234
Query: 147 LKV 149
+V
Sbjct: 235 TRV 237
>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 494
Score = 29.5 bits (63), Expect = 3.0
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 84 TKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVK--- 140
+KKI+ + + K++ + P + QPKKK+ RLD S+ L + ++
Sbjct: 27 SKKIEHVVTEDLSQSSEKSKKRGGPKELDEVQPKKKQ-RLDCDWSSQCLALLRFLMEHRG 85
Query: 141 ---IKIP-EELKVWLVDDWDVITRQQKLAILPAKL--TVSQIVDNYLAFKK---SSKSHN 191
K P + +K+ + D ++VI + L + +KL V D + A + ++ H
Sbjct: 86 GWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHY 145
Query: 192 QAKESVLVDITEGIKEYFNATLGSQLLYKFERPQYSEILQEYPDTPMSQ 240
+ + I + I E F S + K R ++E+ + Y P+ +
Sbjct: 146 NPLWNEVHTIAKEINEIFEVRWESLMKKKVLRLSWNEVREGYKRQPVER 194
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 61 KYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAK---TTKTQSKDTPADSGSDQPK 117
KY EA +Q+Q+ + A + K +KE D + K + QS ++ SGS + +
Sbjct: 578 KYAEAMLQKQQYSGQVKEASELENKSMKEVDESKKDLKDKAANEEQSNNSSRPSGSGEAE 637
Query: 118 K 118
K
Sbjct: 638 K 638
>At3g45980.1 68416.m04975 histone H2B identical to histone H2B
Arabidopsis thaliana GI:2407802; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 80 QPTKTKKIKE-SDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKV 137
+P K ++E S + APA+ K P ++G+ KKK+ + S+E+ + Y+ KV
Sbjct: 13 KPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMK-KKSVETYKIYIFKV 70
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 61 KYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKR 120
+Y E + ++E ++ + ++ KK +E DS +K K +S+D A ++ K+K+
Sbjct: 1014 EYEEKKSKTKEEAKK--EKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKK 1071
>At1g54960.1 68414.m06277 NPK1-related protein kinase, putative
(ANP2) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 2, partial cds GI:2342424
Length = 596
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 93 TPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLV 152
+P+ A SK + + S PK ES Q +A E++ K EEL L
Sbjct: 502 SPSRATDAACCSKSPESGNSSGAPKNSNASAGAEQESNSQSVALSEIERKWKEELDQELE 561
Query: 153 DDWDVITRQQKLAILPAKLTVSQ 175
ITRQ + P ++S+
Sbjct: 562 RKRREITRQAGMGSSPRDRSLSR 584
>At4g09290.1 68417.m01537 hypothetical protein
Length = 376
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 75 RAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRG-RLDLSIESEE 131
+ + + K K K++D + +P K K G D KKK+ + ++ +ES+E
Sbjct: 43 KTNEKKKKKLVKDKDADVSESPVKKQKVSHSQGVHSGGGDAQKKKKNKKKEVVVESDE 100
>At3g49970.1 68416.m05464 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 526
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 76 AHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLA 135
AH+AQ + ++ + +PAPA KT S + ++ K R L +E L
Sbjct: 397 AHAAQNDRFQENLSNSDSPAPATAEKTLSPPELSSYKNELSKLNRENQYLKLE-----LL 451
Query: 136 KVEVKIKIPEELKVWLV 152
KV++K K E+ K + V
Sbjct: 452 KVKMKFKELEKEKAFEV 468
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 46 WNKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESD 91
+ +NW + P+ + L+ NE V+R+ E + K + E +
Sbjct: 367 YTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKVLDVNEDE 412
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 75 RAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYL 134
+ S P + K+ K STP+PAK + + ++ + ++ K+ E EE+
Sbjct: 22 KRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEKLKR---------EEEERKR 72
Query: 135 AKVEVKIKIPEELKVWLVDD 154
+ E ++K+ EE V V++
Sbjct: 73 RQREAELKLIEEETVKRVEE 92
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 83 KTKKIKESDSTPAPAKTTKTQSKDTPADS-GSDQPKKKRGRLDLSIESEEQYLAKVE 138
K K +++ A K + +SKD PA+S D+P+ G D ES+ + V+
Sbjct: 353 KLKDAEKAAFDEAEKKNEEEESKDAPAESDAEDEPEDDEGGDDSDSESKAEETKSVD 409
>At5g28250.1 68418.m03425 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 939
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 127 IESEEQYLAKV-EVKIKIPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKK 185
IE ++Q+ +KV + IK L L D D+ + ++ +L +K VSQ+ +L F K
Sbjct: 720 IERKKQFTSKVMDALIKFSRHL---LRTD-DIDGEKLRVDVLGSKF-VSQLTRLFLKFSK 774
Query: 186 SSKSHNQAKESVLVDITEGIKE 207
+S + +VLV++ G+ E
Sbjct: 775 TSPPEDFIFPAVLVELLMGVGE 796
>At3g14860.2 68416.m01879 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 493
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 61 KYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADS 111
K++ + +RQ Q S + + K KE KTT+T+ K TP+D+
Sbjct: 413 KHHRTSSKRQDYAQFYASGEVAQPKIHKERSRRRHRDKTTETEPKPTPSDT 463
>At3g14860.1 68416.m01878 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 492
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 61 KYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADS 111
K++ + +RQ Q S + + K KE KTT+T+ K TP+D+
Sbjct: 412 KHHRTSSKRQDYAQFYASGEVAQPKIHKERSRRRHRDKTTETEPKPTPSDT 462
>At2g33400.1 68415.m04094 expressed protein
Length = 272
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 89 ESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLS-----IESEEQYLAKVEVKIKI 143
ESD T + AD D+ +++ D++ +E+ Q+ A +K+
Sbjct: 155 ESDLEDEDYYTDNENDYEDDADD-EDEEEEEENEQDVAPLLNPVENLAQWKAVKARPVKV 213
Query: 144 PEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDIT 202
+K + +D D Q +L ++ V+ + N+LA KS ++ +K S +VDIT
Sbjct: 214 KRVMKENVEEDMD----DQAKPLLK-EIIVNTSLSNWLASPKSLHANGSSKRSPIVDIT 267
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 126 SIESEEQYLAKVEVKIKIPEE 146
S ESEE + K+ VK+K+PEE
Sbjct: 14 SSESEEFHREKIRVKVKLPEE 34
>At2g14830.1 68415.m01680 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 454
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 52 EWVPE--SRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPA 109
E+ PE +VLK +A + +KEV ++SAQP + + ES+ A+ K D
Sbjct: 256 EYTPEFHKQVLKSEKA--EEEKEVMSSNSAQPYCSSQKAESE-----AEVYKFTLTDADI 308
Query: 110 DSGSDQPKKKRGRLDLSIESE 130
+ +Q +K D IE E
Sbjct: 309 EENQEQERKVCDEEDDCIEEE 329
>At1g77130.1 68414.m08985 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 618
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 23 EAKCLKSSVT-KDKHVRYLIHYAGWNKNW 50
E K +K+S+ D + Y++HY G+NK W
Sbjct: 469 EIKKMKTSLFGADPPILYVLHYLGYNKPW 497
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 56 ESRVLKYNEANVQRQKEVQRAHSAQPTK---TKKIKESDSTPAPAKTTKTQSKDTPADSG 112
ES + + ++ K + H + T ++E S K K + K++ +
Sbjct: 18 ESPMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSNKEKKKKRKREEKESEKNKK 77
Query: 113 SDQPKKKRGRLDLSI-ESEEQYLAKVEVKIKIPEELK 148
D P+KK DL ESE+Q KV V K EE K
Sbjct: 78 KDVPEKKLEAEDLGEGESEQQ---KVVVTGKGVEEAK 111
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 63 NEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGR 122
+E V R + + + K KE A + K Q +D AD + ++K
Sbjct: 681 DELRVNRVEYEAKLNELSGKTDLKTKEMKRMSADLEYQKRQKEDVNADLTHEITRRKDEI 740
Query: 123 LDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVIT---RQQKLAILP 168
L ++ EE + +E + + EEL+ + + VIT Q + AI P
Sbjct: 741 EILRLDLEETRKSSMETEASLSEELQRIIDEKEAVITALKSQLETAIAP 789
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 67 VQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGR 122
V+R+K +R HS+ +++ E+DS+ + +++ S + S S + +KKR R
Sbjct: 196 VRRKK--RRRHSSSESESSSDSETDSSESDSESDSDLSSPSFLSSSSHERQKKRKR 249
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 78 SAQPTKTKKIKESDSTPAPAKTTK-TQSKDTPADSGSDQPKKKRGRLDLSIESEE 131
S + K K K++D + PAK K + S+ + Q KKK + +++++S+E
Sbjct: 45 SEKKKKLVKDKDADVSETPAKKQKVSHSEGVHSREKDAQKKKKNKKKEVAVKSDE 99
>At2g47910.2 68415.m05988 expressed protein
Length = 198
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 206 KEYFNATLGSQLLYKFERPQYSEILQEYPD 235
K Y + T+G + YK E P L EYPD
Sbjct: 68 KRYLDRTIGFTINYKREDPGDPRELSEYPD 97
>At2g47910.1 68415.m05987 expressed protein
Length = 246
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 206 KEYFNATLGSQLLYKFERPQYSEILQEYPD 235
K Y + T+G + YK E P L EYPD
Sbjct: 116 KRYLDRTIGFTINYKREDPGDPRELSEYPD 145
>At5g43720.1 68418.m05345 expressed protein
Length = 329
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 55 PESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTT-KTQSKDTPADSGS 113
P++R + N+ Q+ + S T ++ + S + A A + +QS + ++S +
Sbjct: 255 PQARFESNSRKNLYVQRNEMPSSSRNNTSNRRSESSYNARASAANSYSSQSSNLSSNSDA 314
Query: 114 DQPKKKR 120
+PK+KR
Sbjct: 315 HKPKRKR 321
>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
identical to like heterochromatin protein LHP1
[Arabidopsis thaliana] GI:15625407; contains Pfam
profile PF00385: 'chromo' (CHRromatin Organization
MOdifier)
Length = 445
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 22 YEAKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVP 55
YE + ++ + V+YLI + GW + + W P
Sbjct: 108 YEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEP 141
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 35 KHVRYLIHYAGWNKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTP 94
KH+ Y A K W E KYN + + + Q + ++ + D++P
Sbjct: 458 KHLSYNRSMAQQAKIWWYENLERVCKKYNICGIDSSTDGGGSTYGQCSNSQFQRNMDASP 517
Query: 95 APAKTTKTQSKDTPADSGSDQPK 117
KT+ +KD+P S ++ K
Sbjct: 518 GGNKTSNQSTKDSPRASQVEKEK 540
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 35 KHVRYLIHYAGWNKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTP 94
KH+ Y A K W E KYN + + + Q + ++ + D++P
Sbjct: 458 KHLSYNRSMAQQAKIWWYENLERVCKKYNICGIDSSTDGGGSTYGQCSNSQFQRNMDASP 517
Query: 95 APAKTTKTQSKDTPADSGSDQPK 117
KT+ +KD+P S ++ K
Sbjct: 518 GGNKTSNQSTKDSPRASQVEKEK 540
>At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1077
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 119 KRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPA-KLTVSQIV 177
K G LD +IE +Y K+KI ++V++ W + LA L A L +SQ
Sbjct: 461 KVGFLDKTIEDVNRYYTG-RWKVKIGRLVEVYVYGSWQI------LAFLAAVLLLISQNA 513
Query: 178 DNYLAFKKSSKSHNQAKESV 197
LA + SK Q S+
Sbjct: 514 SRNLAVTRISKKKTQTTHSL 533
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 61 KYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKK-- 118
K NE + ++E + + +KI++ +S P K K +S S + K
Sbjct: 559 KENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEK 618
Query: 119 ----KRGRLDLSIESEEQYLAKVEVKIKIPEELK 148
K S ES+E + E K ++ E K
Sbjct: 619 ETETKEKEESSSNESQENVNTESEKKEQVEENEK 652
>At2g19400.1 68415.m02263 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 527
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 152 VDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVL-VDITEGIKEYFN 210
VDD+D+++ + A +L + N A KK KS ++ V V +
Sbjct: 102 VDDFDLLSIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 161
Query: 211 ATLGSQLLYKFERPQYSEILQEY 233
+ +L Y F+ P+Y ++ EY
Sbjct: 162 SDCIVKLYYSFQDPEYLYLIMEY 184
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 47 NKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKD 106
N E E+ K + +++KE + A +A T + ++KE + + + + KD
Sbjct: 340 NAGEKEGEEETAAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTEPLQPKKKD 399
Query: 107 TPADSGSDQ-PKKKR---GRLDLSIESEEQYLAKVEVKIKIPEE 146
+ + PK R L E+EE+ + E K++ EE
Sbjct: 400 AKGKAAEKKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEEE 443
>At1g51880.1 68414.m05848 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 880
Score = 27.9 bits (59), Expect = 9.0
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 143 IPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDIT 202
I +L V + +DV K A +P+ + I D + +S+S+ + + +
Sbjct: 228 ISTDLLVDTSNPYDVPQAVAKTACVPSNASQPLIFD-WTLDNITSQSYVYMHFAEIQTLK 286
Query: 203 EGIKEYFNATL-GSQLLYKFERPQYSEILQEYPDTPMSQVYGAVHLLRLFAKMGPMLAYT 261
+ FN T G Q +Y + RP+ EI + P+S G+ L F K G
Sbjct: 287 DNDIREFNITYNGGQNVYSYLRPEKFEISTLFDSKPLSSPDGSFSL--SFTKTGNSTLPP 344
Query: 262 ALDEKSLHHVLSHIQ 276
++ ++ VL ++
Sbjct: 345 LINGLEIYKVLDLLE 359
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 63 NEANVQRQKEVQRAHSAQPTKTKKIKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGR 122
++++ + E A P K SDS+ + K PA +D K+
Sbjct: 189 DDSDEDSEDEKPATKKAAPAAAKAASSSDSSDEDSDEESEDEK--PAQKKADTKASKKSS 246
Query: 123 LDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPA 169
D S ESEE ++ E + + V +VD +Q K PA
Sbjct: 247 SDESSESEEDE-SEDEEETPKKKSSDVEMVDAEKSSAKQPKTPSTPA 292
>At1g27620.1 68414.m03373 transferase family protein similar to
hypersensitivity-related gene product HSR201 - Nicotiana
tabacum, EMBL:X95343; contains Pfam transferase family
domain PF00248
Length = 442
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/75 (28%), Positives = 29/75 (38%)
Query: 227 SEILQEYPDTPMSQVYGAVHLLRLFAKMGPMLAYTALDEKSLHHVLSHIQDFLKYMVTNR 286
S+ LQ P P + + HLLRL P L T + + + S Q M
Sbjct: 223 SKYLQSQPLAPATLTFNQSHLLRLKKTCAPSLKCTTFEALAANTWRSWAQSLDLPMTMLV 282
Query: 287 STLFNLQDYGNATPE 301
LF++ TPE
Sbjct: 283 KLLFSVNMRKRLTPE 297
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.130 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,262,216
Number of Sequences: 28952
Number of extensions: 301068
Number of successful extensions: 1163
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1120
Number of HSP's gapped (non-prelim): 72
length of query: 307
length of database: 12,070,560
effective HSP length: 81
effective length of query: 226
effective length of database: 9,725,448
effective search space: 2197951248
effective search space used: 2197951248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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