Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001580-TA|BGIBMGA001580-PA|undefined
(308 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein. 281 3e-75
D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding prote... 281 3e-75
BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding pro... 281 3e-75
AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding pro... 281 3e-75
AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding pro... 281 3e-75
AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding pro... 281 3e-75
AL162385-9|CAI12863.1| 141|Homo sapiens nuclear cap binding pro... 69 2e-11
>X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein.
Length = 790
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 492 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 549
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 550 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 609
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 610 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 669
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 670 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 726
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 727 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 786
Query: 305 ALTA 308
AL A
Sbjct: 787 ALQA 790
>D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding protein
protein.
Length = 790
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 492 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 549
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 550 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 609
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 610 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 669
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 670 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 726
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 727 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 786
Query: 305 ALTA 308
AL A
Sbjct: 787 ALQA 790
>BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 492 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 549
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 550 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 609
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 610 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 669
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 670 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 726
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 727 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 786
Query: 305 ALTA 308
AL A
Sbjct: 787 ALQA 790
>AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 492 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 549
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 550 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 609
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 610 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 669
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 670 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 726
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 727 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 786
Query: 305 ALTA 308
AL A
Sbjct: 787 ALQA 790
>AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 492 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 549
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 550 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 609
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 610 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 669
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 670 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 726
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 727 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 786
Query: 305 ALTA 308
AL A
Sbjct: 787 ALQA 790
>AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa variant protein.
Length = 803
Score = 281 bits (688), Expect = 3e-75
Identities = 139/304 (45%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 5 SAALPGTEAAHQLVVFVRNKCTPEEALNVLRDLPNPLKEGEQTANQPTAYNPLKIDVFVQ 64
S +LPG A L V ++K T +E ++L+D+PNP ++ + ++ ++NPLKI+VFVQ
Sbjct: 505 SNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDD--DEGFSFNPLKIEVFVQ 562
Query: 65 TLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICILRNVWELWQRHPQMVCVLIDKML 124
TLL+L +KS SHSF+A++KFH VFK LAES+E ++ +LR ++E+W+ HPQM+ VL+DKM+
Sbjct: 563 TLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI 622
Query: 125 KTQIVECSAVATWLFSKEMAPYFTHGCLWEMLHLTIDKMNKHVSKLSXXXXXXXXXXXXX 184
+TQIV+C+AVA W+FS E++ FT +WE+LH TI KMNKHV K+
Sbjct: 623 RTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQ 682
Query: 185 XXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXHMDQKRLFLIVFQRFIMILSEHLV 244
+QK LFL++FQRFIMIL+EHLV
Sbjct: 683 HKRRSDDDDRSSDRKDGV---LEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLV 739
Query: 245 RCDTDARDPHTHWYRATLHRLTQVFLIHHEQVQKYSSTLETLLFTQDLDPHILDVFHQFV 304
RC+TD T WY+ + RL Q+FL HH+ +Q+Y TLE LLFT +LDPHIL VF QF
Sbjct: 740 RCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFC 799
Query: 305 ALTA 308
AL A
Sbjct: 800 ALQA 803
>AL162385-9|CAI12863.1| 141|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 141
Score = 69.3 bits (162), Expect = 2e-11
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 223 DQKRLFLIVFQRFIMILSEHLVRCDTDARDPHTHWYRATLHRLTQVFL 270
+QK LFL++FQRFIMIL+EHLVRC+TD T WY+ + RL Q+FL
Sbjct: 58 EQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFL 105
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,306,421
Number of Sequences: 224733
Number of extensions: 1348667
Number of successful extensions: 3214
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3195
Number of HSP's gapped (non-prelim): 13
length of query: 308
length of database: 73,234,838
effective HSP length: 90
effective length of query: 218
effective length of database: 53,008,868
effective search space: 11555933224
effective search space used: 11555933224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)
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