GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001579-TA|BGIBMGA001579-PA|IPR003890|Initiation factor
eIF-4 gamma, middle
         (492 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    25   3.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   3.5  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   3.5  

>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 423 LSNFQYRWSWEDWEACLQLDPEHPKPRLSYHQRIKDMVPESFASFVPPKPEP 474
           LS+   RW  +D++   +  P  P+PR    +RI +++ +S A   P    P
Sbjct: 240 LSSCTTRWRADDFDHVEESIPNLPRPR----KRITELMVKSLAEQAPNNVPP 287


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 4   RRGHDDEEGYERLHRKRRRVSENQ 27
           +RG  D++GY+R   K  R ++N+
Sbjct: 532 KRGKKDDKGYDRRSGKEERSNDNR 555


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 11/53 (20%), Positives = 25/53 (47%)

Query: 234 LWSQIKKLKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPM 286
           +W Q +++K    +      P L +D  + +    ++ A+Q   H  +D+ P+
Sbjct: 52  IWFQNRRMKAKKDNSASANTPDLTYDGEIPQQSLESIVAVQSQHHTASDSQPL 104


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,633
Number of Sequences: 2123
Number of extensions: 22905
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 3
length of query: 492
length of database: 516,269
effective HSP length: 67
effective length of query: 425
effective length of database: 374,028
effective search space: 158961900
effective search space used: 158961900
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)