Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001579-TA|BGIBMGA001579-PA|IPR003890|Initiation factor
eIF-4 gamma, middle
(492 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding pro... 613 e-175
X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein. 611 e-174
D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding prote... 611 e-174
BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding pro... 611 e-174
AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding pro... 611 e-174
AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding pro... 611 e-174
AJ006054-1|CAB41974.1| 527|Homo sapiens UDP glucuronosyltransfe... 33 3.0
>AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa variant protein.
Length = 803
Score = 613 bits (1514), Expect = e-175
Identities = 282/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 14 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 71
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 72 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 131
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH ED VP VRRDW+V+A LS+LP
Sbjct: 132 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEDDVPQVRRDWYVYAFLSSLP 191
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 192 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 251
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 252 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 311
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 312 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 371
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 372 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 431
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 432 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 491
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 492 ANPTCIYKYGDESSNS 507
>X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein.
Length = 790
Score = 611 bits (1510), Expect = e-174
Identities = 281/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 59 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 118
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH E+ VP VRRDW+V+A LS+LP
Sbjct: 119 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLP 178
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 179 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 238
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 239 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 298
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 299 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 358
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 359 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 418
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 419 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 478
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 479 ANPTCIYKYGDESSNS 494
>D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding protein
protein.
Length = 790
Score = 611 bits (1510), Expect = e-174
Identities = 281/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 59 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 118
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH E+ VP VRRDW+V+A LS+LP
Sbjct: 119 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLP 178
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 179 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 238
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 239 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 298
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 299 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 358
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 359 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 418
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 419 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 478
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 479 ANPTCIYKYGDESSNS 494
>BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 611 bits (1510), Expect = e-174
Identities = 281/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 59 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 118
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH E+ VP VRRDW+V+A LS+LP
Sbjct: 119 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLP 178
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 179 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 238
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 239 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 298
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 299 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 358
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 359 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 418
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 419 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 478
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 479 ANPTCIYKYGDESSNS 494
>AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 611 bits (1510), Expect = e-174
Identities = 281/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 59 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 118
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH E+ VP VRRDW+V+A LS+LP
Sbjct: 119 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLP 178
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 179 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 238
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 239 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 298
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 299 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 358
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 359 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 418
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 419 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 478
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 479 ANPTCIYKYGDESSNS 494
>AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 611 bits (1510), Expect = e-174
Identities = 281/496 (56%), Positives = 352/496 (70%), Gaps = 13/496 (2%)
Query: 1 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 60
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 61 ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKV 120
ADL ++ KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK
Sbjct: 59 ADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA 118
Query: 121 GKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDWFVFAVLSALP 180
+N A Y +RF++DLVNCH E+ VP VRRDW+V+A LS+LP
Sbjct: 119 NNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLP 178
Query: 181 WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWSQIKK 240
WVG+ELYEKK++++D + E +L +R K H P L+VW+AD PH QEEYLDCLW+QI+K
Sbjct: 179 WVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQK 238
Query: 241 LKQDNWSEKHIPRPYLAFDSILCEALHHTLPAIQPPPHNDTDTYPMPRVIFRMFDYTDCP 300
LK+D W E+HI RPYLAFDSILCEAL H LP PPPH + YPMPRVIFRMFDYTD P
Sbjct: 239 LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP 298
Query: 301 DGPVLPGVHSIERFLIEEHLHNIIETYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE 360
+GPV+PG HS+ERF+IEE+LH II+++ ERK CAAQL+ +P K KIPL Y IVEVIFAE
Sbjct: 299 EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAE 358
Query: 361 LFNLPKPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVACFDRFANWFA 420
LF LP P ++++ Y ++LIELCKLQP ++PQVLAQATE+L+MR+DTMN C DRF NWF+
Sbjct: 359 LFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS 418
Query: 421 YHLSNFQYRWSWEDWEACLQLDPEHPKP-----------RLSYHQRIKDMVPESFASFVP 469
+HLSNFQ+RWSWEDW CL DPE PKP RLSYHQRI D+VP +F++ P
Sbjct: 419 HHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCP 478
Query: 470 PKPEPIYKYSMEGADN 485
P IYKY E +++
Sbjct: 479 ANPTCIYKYGDESSNS 494
>AJ006054-1|CAB41974.1| 527|Homo sapiens UDP
glucuronosyltransferase protein.
Length = 527
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Query: 386 PSTMPQVLAQATEILFMRIDTMNVACFDRFANWFAYHLSNFQYRWSWEDWEA 437
PS +P VL++ T D M+ DR N+ +YHL ++ + W+ W++
Sbjct: 190 PSYVPAVLSELT-------DQMSFT--DRIRNFISYHLQDYMFETLWKSWDS 232
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.139 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,762,579
Number of Sequences: 224733
Number of extensions: 3403319
Number of successful extensions: 6690
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6672
Number of HSP's gapped (non-prelim): 7
length of query: 492
length of database: 73,234,838
effective HSP length: 93
effective length of query: 399
effective length of database: 52,334,669
effective search space: 20881532931
effective search space used: 20881532931
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 67 (31.1 bits)
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