GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001578-TA|BGIBMGA001578-PA|undefined
         (259 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 57  QLFAFWLFLLMISVFLVLTRTKSAVKVNTVTRKSFHLLASLVFMSGIIY 105
           ++F   L L+    FL++T+T   + V   + +   L    +F+ GI+Y
Sbjct: 594 EIFGLGLLLMFGVSFLLITQTIFIICVIVQSEQIAWLHLLYIFLVGIMY 642



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 48 NLISSIVLVQLFAFWLFLLM 67
          N+I  ++ V   ++WL+L++
Sbjct: 46 NIILQVLFVSFVSYWLYLVL 65


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 33  IGRTMNILHDPNEDMNLISSIVLVQLFAFWLFLLMI 68
           +G+  NI       ++ I+ I LVQL+ F L+LL++
Sbjct: 181 LGKQYNIASSKTLKLS-INIISLVQLWIFQLYLLIL 215


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory
          receptor candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 48 NLISSIVLVQLFAFWLFLLM 67
          N+I  ++ V   ++WL+L++
Sbjct: 64 NIILQVLFVSFVSYWLYLVL 83


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 201 GSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAK 235
           G  + T ++ S++RN  V++   +  SIS    A+
Sbjct: 173 GVAFQTIEFVSIIRNRFVILNRYIEESISKYKHAE 207


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 50  ISSIVLVQLFAFWLFLLMISVFLVLTRTKSAVKVN 84
           IS  +L  L +  L ++++S+ L   +TK   K+N
Sbjct: 75  ISFEILGSLDSLILLMVLVSIILGSLKTKEWAKLN 109


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,017
Number of Sequences: 317
Number of extensions: 1792
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 259
length of database: 114,650
effective HSP length: 55
effective length of query: 204
effective length of database: 97,215
effective search space: 19831860
effective search space used: 19831860
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)