Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001578-TA|BGIBMGA001578-PA|undefined
(259 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035556-1|AAH35556.1| 538|Homo sapiens dolichol kinase protein. 89 2e-17
AY358759-1|AAQ89119.1| 538|Homo sapiens TREC2422 protein. 89 2e-17
AL672142-7|CAI10844.1| 538|Homo sapiens transmembrane protein 1... 89 2e-17
AB029017-1|BAA83046.2| 544|Homo sapiens KIAA1094 protein protein. 89 2e-17
BC115363-1|AAI15364.1| 799|Homo sapiens ARHGAP12 protein protein. 32 2.3
BC115362-1|AAI15363.1| 799|Homo sapiens ARHGAP12 protein protein. 32 2.3
BC094719-1|AAH94719.1| 841|Homo sapiens ARHGAP12 protein protein. 32 2.3
AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containi... 32 2.3
AY033594-1|AAK52311.1| 816|Homo sapiens rho-GAP domain containi... 32 2.3
AL834250-1|CAD38926.2| 792|Homo sapiens hypothetical protein pr... 32 2.3
AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating p... 32 2.3
AL390715-3|CAI12371.1| 816|Homo sapiens Rho GTPase activating p... 32 2.3
AL390715-2|CAI12373.1| 794|Homo sapiens Rho GTPase activating p... 32 2.3
>BC035556-1|AAH35556.1| 538|Homo sapiens dolichol kinase protein.
Length = 538
Score = 88.6 bits (210), Expect = 2e-17
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 56 VQLFAFWLFLLMISVFLVL----TRTKSAVKVN---TVTRKSFHLLASLVFMSGIIYDVY 108
+ L A+W L ++ +VL R+ S K + T+ RK FHL+ ++ GII+D
Sbjct: 298 IYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYIPGIIFDRP 357
Query: 109 LTSXXXXXXXXXXXXVEALRKLNITPISEALQSAFDVYSDEKDIGSFAMTPIYLYVGLAC 168
L +E +R I P+ L+S ++ DE+D G +T IYL +G++
Sbjct: 358 LLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLILTHIYLLLGMSL 417
Query: 169 PLILVP---SYEGT-----TLELLSGVLATGVGDTAASWFGSKYGTKKW----------- 209
P+ L+P + +G+ L +GVLA GVGDT AS FGS G +W
Sbjct: 418 PIWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTM 477
Query: 210 TSLLRN--NTVLI------------RTMLAASIS--SVVEAKTDQVDNLILPLVTLLV 251
TS+ + LI + SIS S++EA T Q+DNL+LPL L++
Sbjct: 478 TSIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLIL 535
>AY358759-1|AAQ89119.1| 538|Homo sapiens TREC2422 protein.
Length = 538
Score = 88.6 bits (210), Expect = 2e-17
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 56 VQLFAFWLFLLMISVFLVL----TRTKSAVKVN---TVTRKSFHLLASLVFMSGIIYDVY 108
+ L A+W L ++ +VL R+ S K + T+ RK FHL+ ++ GII+D
Sbjct: 298 IYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYIPGIIFDRP 357
Query: 109 LTSXXXXXXXXXXXXVEALRKLNITPISEALQSAFDVYSDEKDIGSFAMTPIYLYVGLAC 168
L +E +R I P+ L+S ++ DE+D G +T IYL +G++
Sbjct: 358 LLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLILTHIYLLLGMSL 417
Query: 169 PLILVP---SYEGT-----TLELLSGVLATGVGDTAASWFGSKYGTKKW----------- 209
P+ L+P + +G+ L +GVLA GVGDT AS FGS G +W
Sbjct: 418 PIWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTM 477
Query: 210 TSLLRN--NTVLI------------RTMLAASIS--SVVEAKTDQVDNLILPLVTLLV 251
TS+ + LI + SIS S++EA T Q+DNL+LPL L++
Sbjct: 478 TSIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLIL 535
>AL672142-7|CAI10844.1| 538|Homo sapiens transmembrane protein 15
protein.
Length = 538
Score = 88.6 bits (210), Expect = 2e-17
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 56 VQLFAFWLFLLMISVFLVL----TRTKSAVKVN---TVTRKSFHLLASLVFMSGIIYDVY 108
+ L A+W L ++ +VL R+ S K + T+ RK FHL+ ++ GII+D
Sbjct: 298 IYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYIPGIIFDRP 357
Query: 109 LTSXXXXXXXXXXXXVEALRKLNITPISEALQSAFDVYSDEKDIGSFAMTPIYLYVGLAC 168
L +E +R I P+ L+S ++ DE+D G +T IYL +G++
Sbjct: 358 LLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLILTHIYLLLGMSL 417
Query: 169 PLILVP---SYEGT-----TLELLSGVLATGVGDTAASWFGSKYGTKKW----------- 209
P+ L+P + +G+ L +GVLA GVGDT AS FGS G +W
Sbjct: 418 PIWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTM 477
Query: 210 TSLLRN--NTVLI------------RTMLAASIS--SVVEAKTDQVDNLILPLVTLLV 251
TS+ + LI + SIS S++EA T Q+DNL+LPL L++
Sbjct: 478 TSIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLIL 535
>AB029017-1|BAA83046.2| 544|Homo sapiens KIAA1094 protein protein.
Length = 544
Score = 88.6 bits (210), Expect = 2e-17
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 56 VQLFAFWLFLLMISVFLVL----TRTKSAVKVN---TVTRKSFHLLASLVFMSGIIYDVY 108
+ L A+W L ++ +VL R+ S K + T+ RK FHL+ ++ GII+D
Sbjct: 304 IYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYIPGIIFDRP 363
Query: 109 LTSXXXXXXXXXXXXVEALRKLNITPISEALQSAFDVYSDEKDIGSFAMTPIYLYVGLAC 168
L +E +R I P+ L+S ++ DE+D G +T IYL +G++
Sbjct: 364 LLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLILTHIYLLLGMSL 423
Query: 169 PLILVP---SYEGT-----TLELLSGVLATGVGDTAASWFGSKYGTKKW----------- 209
P+ L+P + +G+ L +GVLA GVGDT AS FGS G +W
Sbjct: 424 PIWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTM 483
Query: 210 TSLLRN--NTVLI------------RTMLAASIS--SVVEAKTDQVDNLILPLVTLLV 251
TS+ + LI + SIS S++EA T Q+DNL+LPL L++
Sbjct: 484 TSIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLIL 541
>BC115363-1|AAI15364.1| 799|Homo sapiens ARHGAP12 protein protein.
Length = 799
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 449 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 508
>BC115362-1|AAI15363.1| 799|Homo sapiens ARHGAP12 protein protein.
Length = 799
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 449 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 508
>BC094719-1|AAH94719.1| 841|Homo sapiens ARHGAP12 protein protein.
Length = 841
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 491 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 550
>AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containing
protein ARHGAP12b protein.
Length = 846
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 496 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 555
>AY033594-1|AAK52311.1| 816|Homo sapiens rho-GAP domain containing
protein ARHGAP12a protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 466 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 525
>AL834250-1|CAD38926.2| 792|Homo sapiens hypothetical protein
protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 442 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 501
>AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 846
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 496 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 555
>AL390715-3|CAI12371.1| 816|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 466 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 525
>AL390715-2|CAI12373.1| 794|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 794
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 185 SGVLATGVGDTAASWFGSKYGTKKWTSLLRNNTVLIRTMLAASISSVVEAKTDQVDNLIL 244
S +L T ++ SWFGS ++T L+ T+ + + +S +V E KT Q L++
Sbjct: 444 SSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLI 503
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,727,478
Number of Sequences: 224733
Number of extensions: 1137567
Number of successful extensions: 2151
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2130
Number of HSP's gapped (non-prelim): 17
length of query: 259
length of database: 73,234,838
effective HSP length: 88
effective length of query: 171
effective length of database: 53,458,334
effective search space: 9141375114
effective search space used: 9141375114
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 64 (29.9 bits)
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