GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001577-TA|BGIBMGA001577-PA|IPR002290|Serine/threonine
protein kinase, IPR000719|Protein kinase, IPR011009|Protein
kinase-like
         (450 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    37   3e-04
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    36   7e-04
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    36   7e-04
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                30   0.035
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              29   0.11 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    29   0.11 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.32 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   0.74 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   0.74 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   9.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 301 VPVQIKKLVGVTAQHVRKKRNTEINILRKCRHPNIILLMGLYPDAQNNIHLICE----RC 356
           + V IK L   +A   R    TE +I+ +  HPN+I L G+   + N + +I E      
Sbjct: 662 IDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQGVVTKS-NPVMIITEFMENGS 720

Query: 357 VDTLYGIIHEKGRILSAQTAVQYALDISNALVFLRMQGFIHTELNSACVMITDHDTAKLV 416
           +DT       K ++L     V     I++ + +L    ++H +L +  V++      K+ 
Sbjct: 721 LDTFLRANDGKFQVLQ---LVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIA 777

Query: 417 DVG 419
           D G
Sbjct: 778 DFG 780


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 35.9 bits (79), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 371 LSAQTAVQYALDISNALVFLRMQGFIHTELNSACVMITDHDTAKLVDVGPC 421
           LS    +Q ALD+   + +L  QG +H ++    V++   + AKL D G C
Sbjct: 694 LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC 744


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 35.9 bits (79), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 371 LSAQTAVQYALDISNALVFLRMQGFIHTELNSACVMITDHDTAKLVDVGPC 421
           LS    +Q ALD+   + +L  QG +H ++    V++   + AKL D G C
Sbjct: 732 LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC 782


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 0.035
 Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 7/129 (5%)

Query: 295 NGKWGVVPVQIKKLVGVTAQHVRKKRNTEINILRK----CRHPNIILLMGLYPDAQNNIH 350
           +G +G+V   + K   V A+ ++ ++ + +    K     +H NI+ ++ +   A  ++ 
Sbjct: 75  SGGFGIVYKALYKGEQVAAKIIQTEKYSNMLNSEKHASFLKHSNIVKVLMIEQGASLSL- 133

Query: 351 LICERCVDTLYGIIHEKGRILSAQTAVQYALDISNALVFLRMQGFIHTELNSACVMITDH 410
           +  E C  TL   + E   IL     +     I+ AL F    G +H ++    ++++ +
Sbjct: 134 ITMELCGTTLQNRLDEA--ILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMSKN 191

Query: 411 DTAKLVDVG 419
              KL D G
Sbjct: 192 GQPKLTDFG 200


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 38 EEYKRDLAEFQARRSIGNRDLQETPVKEKRSRHSLPVSCTDC 79
          EE++ +  +F+    + N  + ET  + K+++  LP  C  C
Sbjct: 2  EEFRHNGRDFEYCPDLDNVTMPETTPRRKKNKKPLPTECVFC 43


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 335 IILLMGLYPDAQNNIHLICERCVD-TLYGIIHEKGRILSAQTAVQYALDISNALVFLRMQ 393
           ++ L   + D +  ++++ E C+   L+ ++ +KG      T   Y   +  A  +L  +
Sbjct: 428 VVKLFKTFKD-RKYLYMLMEACLGGELWTVLRDKGHFDDGTTRF-YTACVVEAFDYLHSR 485

Query: 394 GFIHTELNSACVMITDHDTAKLVDVG 419
             I+ +L    +++      KLVD G
Sbjct: 486 NIIYRDLKPENLLLDSQGYVKLVDFG 511


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.1 bits (57), Expect = 0.32
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 136 PNPSY--SEPHKTHHRTR---RHVCRSPDLDFVAQKHIDFHEDDQVDSPP------DFYK 184
           P+PS   S+PH+ H++ +    H C   D + + Q  I+     +V+         D  +
Sbjct: 44  PSPSLLTSQPHQDHNKEKSKNNHHCNQ-DTEKLNQLEIESDNSKEVNDKKEENFIVDRLR 102

Query: 185 NSSLPFETKDFLGTSRIFHEEVDGLNKAGDVKSFNNSESESVNKDDSCE 233
           N     E K+       F E+        DVK   N   +S   +  C+
Sbjct: 103 NDLFECENKEKSNVCLKFEEQKRRKKSLDDVKILRNDRIDSYKSNLKCD 151


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 182 FYKNSSLPFETKDFLGTSRIFHEEVDGLNKAGDVKSFNNSESESVN 227
           FYKN  L     D  G+   F E  DGL +  ++ +F  SE    N
Sbjct: 370 FYKNYLLNVSFIDAAGSEVKFDEHGDGLARY-EILNFRKSEHNGTN 414


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 182 FYKNSSLPFETKDFLGTSRIFHEEVDGLNKAGDVKSFNNSESESVN 227
           FYKN  L     D  G+   F E  DGL +  ++ +F  SE    N
Sbjct: 460 FYKNYLLNVSFIDAAGSEVKFDEHGDGLARY-EILNFRKSEHNGTN 504


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 375 TAVQYALDISNALVFLRMQGFIH 397
           T V++AL++  AL  +  Q F H
Sbjct: 869 TLVEFALELKKALSSINEQSFNH 891


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,692
Number of Sequences: 429
Number of extensions: 5792
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 10
length of query: 450
length of database: 140,377
effective HSP length: 60
effective length of query: 390
effective length of database: 114,637
effective search space: 44708430
effective search space used: 44708430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)