Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001576-TA|BGIBMGA001576-PA|IPR007087|Zinc finger,
C2H2-type
(879 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 37 7e-04
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 37 7e-04
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 31 0.045
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 26 1.3
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 26 1.3
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 1.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 1.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 1.7
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 25 2.2
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 25 2.2
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 25 2.2
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 25 2.2
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 25 2.2
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 25 2.2
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 25 3.0
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 24 3.9
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 24 3.9
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 5.2
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 24 5.2
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 24 5.2
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 23 6.8
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 9.0
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 36.7 bits (81), Expect = 7e-04
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 6 LMKHKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRE 64
L H THS F+C VC FS S+ + H+ RT +S +R + +C C K F
Sbjct: 37 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHM-RT---HSGERPY--RCRLCKKAFSDS 90
Query: 65 SSLYNHLK 72
S+L HL+
Sbjct: 91 STLTKHLR 98
Score = 31.9 bits (69), Expect = 0.020
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 9 HKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRESSL 67
H THS ++C +C FS S+ L +H++ +S ++ + +C CL F + +L
Sbjct: 68 HMRTHSGERPYRCRLCKKAFSDSSTLTKHLR----IHSGEKPY--ECKLCLLRFSQSGNL 121
Query: 68 YNHLK 72
H++
Sbjct: 122 NRHMR 126
Score = 27.9 bits (59), Expect = 0.32
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 6 LMKHKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRE 64
L H THS ++C C FS + L H+ RT +S ++ +C C + F +
Sbjct: 9 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHV-RT---HSGEKP--FRCPVCDRRFSQS 62
Query: 65 SSLYNHLKT 73
SS+ H++T
Sbjct: 63 SSVTTHMRT 71
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 36.7 bits (81), Expect = 7e-04
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 6 LMKHKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRE 64
L H THS F+C VC FS S+ + H+ RT +S +R + +C C K F
Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHM-RT---HSGERPY--RCRLCKKAFSDS 346
Query: 65 SSLYNHLK 72
S+L HL+
Sbjct: 347 STLTKHLR 354
Score = 31.9 bits (69), Expect = 0.020
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 9 HKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRESSL 67
H THS ++C +C FS S+ L +H++ +S ++ + +C CL F + +L
Sbjct: 324 HMRTHSGERPYRCRLCKKAFSDSSTLTKHLR----IHSGEKPY--ECKLCLLRFSQSGNL 377
Query: 68 YNHLK 72
H++
Sbjct: 378 NRHMR 382
Score = 27.9 bits (59), Expect = 0.32
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 6 LMKHKLTHSTVS-FQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRE 64
L H THS ++C C FS + L H+ RT +S ++ +C C + F +
Sbjct: 265 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHV-RT---HSGEKP--FRCPVCDRRFSQS 318
Query: 65 SSLYNHLKT 73
SS+ H++T
Sbjct: 319 SSVTTHMRT 327
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.045
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 18 FQCN--VCATHFSSSNLLLQHIQ-RTGHKYSADRKHNLQCMYCLKVFLRESSLYNHLKTC 74
F CN C F+ S+ L +H++ TG K A C C K F+R L H+KT
Sbjct: 345 FVCNWLFCGKRFTRSDELQRHLRTHTGEKRFA-------CPICNKRFMRSDHLAKHVKTH 397
Query: 75 HKKEDKSS 82
+ K S
Sbjct: 398 NGNGKKGS 405
Score = 23.0 bits (47), Expect = 9.0
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 36 HIQRTGHKYSADRKHNLQCMYCLKVFLRESSLYNHLKT 73
H++ ++ +R ++C K F R L HL+T
Sbjct: 331 HLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRT 368
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 25.8 bits (54), Expect = 1.3
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 333 LNVTESVVTDNSNIVVVYSHPVDSTNKQFQILTTQGIGTQLIQSSAIITQNFETVTTTAP 392
LN+T D V S V S + +I + ++ AI+ T+ P
Sbjct: 476 LNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGG--TLIVHCP 533
Query: 393 VMNAHVIESQEWENDITQMPVSNKPNADLEKT 424
H ++S WE D Q+P++ K + T
Sbjct: 534 FAG-HPVDSVVWERDGRQLPINRKQKVFINGT 564
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 25.8 bits (54), Expect = 1.3
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 851 PDNETDKPDDKIKSLVSDWDD--DDEESK 877
P N+TD DD +LVSD DD DEE K
Sbjct: 152 PKNKTDDDDD---ALVSDSDDREKDEEDK 177
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 848 DPAPDNETDKPDDKIKSLVSDWDDDDEES 876
D D + D D + S +D DDDDEE+
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEET 205
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 848 DPAPDNETDKPDDKIKSLVSDWDDDDEES 876
D D + D D + S +D DDDDEE+
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEET 205
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 848 DPAPDNETDKPDDKIKSLVSDWDDDDEES 876
D D + D D + S +D DDDDEE+
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEET 205
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 25.0 bits (52), Expect = 2.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 857 KPDDKIKSLVSDWDDDDEESKIN 879
K D++++ +SD DDDDE ++
Sbjct: 23 KEDEEVEHRLSDRDDDDENITVD 45
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 786 SGLPKRNREEMGDPLHVKQIENVLANINEGIVSTECNNRTEK 827
+GL +R + + + IE +L N+ +++ ECNN T +
Sbjct: 147 AGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSE 188
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 786 SGLPKRNREEMGDPLHVKQIENVLANINEGIVSTECNNRTEK 827
+GL +R + + + IE +L N+ +++ ECNN T +
Sbjct: 147 AGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSE 188
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 25.0 bits (52), Expect = 2.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 805 IENVLANINEGIVSTECNNRT 825
+E++L N+ +++ ECNN T
Sbjct: 164 VEHILVQTNKLVLALECNNTT 184
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 786 SGLPKRNREEMGDPLHVKQIENVLANINEGIVSTECNNRTEK 827
+GL +R + + + IE +L N+ +++ ECNN T +
Sbjct: 147 AGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSE 188
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 25.0 bits (52), Expect = 2.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 805 IENVLANINEGIVSTECNNRT 825
+E++L N+ +++ ECNN T
Sbjct: 164 VEHILVQTNKLVLALECNNTT 184
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 24.6 bits (51), Expect = 3.0
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 486 TTITPITDSSNPTQGTIVENMIINEQLTEESSENLPTVEENLENIDKNSTK--SKLILDC 543
T TP+ ++ PT +E +++++ N P +E+ NS LILD
Sbjct: 5 TNNTPVQPNAIPTTNNQIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILDA 64
Query: 544 NTK 546
K
Sbjct: 65 MKK 67
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 24.2 bits (50), Expect = 3.9
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 620 EDEYDSPPAINDNKVICEDSKEILTKSTETPQNIEEGTVNTESLLPENLNEPTESAKP-- 677
+ +++ ++ + + S ILTK++ TP +I T + S + P+ +A P
Sbjct: 128 QKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVSINNNTSTSSS-----ASSPSVTAAPHL 182
Query: 678 -ESPN 681
+SPN
Sbjct: 183 RDSPN 187
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 12 THSTVSFQCNVCATHFSSSNLLLQHIQRTGH 42
+H + C VC FSS L H+ + H
Sbjct: 542 SHVSAVLTCKVCDQAFSSLKELSNHMVKNSH 572
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.8 bits (49), Expect = 5.2
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 18 FQCNVCATHFSSSNLLLQHIQRTGH 42
F CN+C S HI R H
Sbjct: 499 FTCNMCGVECSDKVSFFLHIARVSH 523
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 16 VSFQCNVCATHFSSSNLLLQHIQ 38
V QC VC F+++ +L QHI+
Sbjct: 193 VLHQCPVCHKKFTNALVLQQHIR 215
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 23.8 bits (49), Expect = 5.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 404 WENDITQMPVSNKPNADLEKTGQNTPQMTSHQS 436
W N+I MPVS K E+ Q TS S
Sbjct: 321 WLNEIPTMPVSIKDQTIKEELALLAQQSTSRTS 353
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 23.4 bits (48), Expect = 6.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 663 LLPENLNEPTESAKPESPNKQTTKIPNDNISSLLSDW--EDSQEDLSSNDENI 713
++P + N + P+SPN+Q TK D S SD + ++ ND+NI
Sbjct: 22 VIPPHYNIHHGATPPQSPNQQYTK---DCSSPTPSDKLNTSTTSSVNVNDQNI 71
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.0 bits (47), Expect = 9.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 479 QSETLPATTITPITDSSNPTQGTIVENMIINEQLTEESSENLPTVEENLENIDKNS---T 535
+S+ +P + T PTQ T E +EQ TE S+ P + E+ +++ T
Sbjct: 387 KSDEIPPEPVP--TPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNESDGVCT 444
Query: 536 KSKLILD 542
K ++ D
Sbjct: 445 KEGIVRD 451
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.306 0.125 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,479
Number of Sequences: 317
Number of extensions: 9196
Number of successful extensions: 43
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 33
length of query: 879
length of database: 114,650
effective HSP length: 63
effective length of query: 816
effective length of database: 94,679
effective search space: 77258064
effective search space used: 77258064
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 47 (23.0 bits)
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