Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001574-TA|BGIBMGA001574-PA|undefined
(57 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p... 30 1.0
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 30 1.0
X89430-1|CAA61599.1| 476|Homo sapiens methyl CpG binding protei... 28 4.0
BC049384-1|AAH49384.1| 669|Homo sapiens KIAA0953 protein protein. 27 7.1
AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled recep... 27 7.1
AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein. 27 7.1
AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein. 27 7.1
AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein. 27 7.1
AC012457-1|AAY24353.1| 669|Homo sapiens unknown protein. 27 7.1
AB032962-1|BAA86450.2| 596|Homo sapiens KIAA1136 protein protein. 27 7.1
AB023170-1|BAA76797.1| 789|Homo sapiens KIAA0953 protein protein. 27 7.1
BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein pr... 27 9.3
BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein. 27 9.3
AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein. 27 9.3
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein. 27 9.3
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein. 27 9.3
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ... 27 9.3
AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and sc... 27 9.3
AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein. 27 9.3
>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
protein-C protein.
Length = 1202
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
K++ + K++ + K IP ++N + ++ EK EK L+EV+
Sbjct: 330 KQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVM 378
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
K++ + K++ + K IP ++N + ++ EK EK L+EV+
Sbjct: 416 KQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVM 464
>X89430-1|CAA61599.1| 476|Homo sapiens methyl CpG binding protein
2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 2 KRINRIKDRQNKTKHIPTH--THNSVEAAEAFKKTKDRNSEKAEKC 45
K++ + K + + KH P H+S E AEA K S A C
Sbjct: 20 KKVKKDKKEEKEGKHEPVQPSAHHSAEPAEAGKAETSEGSGSARLC 65
>BC049384-1|AAH49384.1| 669|Homo sapiens KIAA0953 protein
protein.
Length = 669
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 15 KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
+H+ S +A +K K+ +E AE+CLRE++
Sbjct: 57 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 92
>AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled receptor
158 protein.
Length = 1212
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 11 QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
+N T + +H+ +AAE +++ + +KAE CL E
Sbjct: 1035 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1072
>AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 11 QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
+N T + +H+ +AAE +++ + +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075
>AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 11 QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
+N T + +H+ +AAE +++ + +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075
>AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 11 QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
+N T + +H+ +AAE +++ + +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075
>AC012457-1|AAY24353.1| 669|Homo sapiens unknown protein.
Length = 669
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 15 KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
+H+ S +A +K K+ +E AE+CLRE++
Sbjct: 57 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 92
>AB032962-1|BAA86450.2| 596|Homo sapiens KIAA1136 protein protein.
Length = 596
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 11 QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
+N T + +H+ +AAE +++ + +KAE CL E
Sbjct: 419 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 456
>AB023170-1|BAA76797.1| 789|Homo sapiens KIAA0953 protein protein.
Length = 789
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 15 KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
+H+ S +A +K K+ +E AE+CLRE++
Sbjct: 266 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 301
>BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 46 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 85
>BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.
Length = 1228
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 617 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 656
>AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675
>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675
>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675
>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
ATROPHIN-1. ).
Length = 1064
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 453 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 492
>AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and
scaffold protein protein.
Length = 1247
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675
>AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.
Length = 1319
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 2 KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
K + + DR N +H+PT N E + FK ++ + ++
Sbjct: 708 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 747
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.124 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,410,177
Number of Sequences: 224733
Number of extensions: 150450
Number of successful extensions: 582
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 21
length of query: 57
length of database: 73,234,838
effective HSP length: 37
effective length of query: 20
effective length of database: 64,919,717
effective search space: 1298394340
effective search space used: 1298394340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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