GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001574-TA|BGIBMGA001574-PA|undefined
         (57 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    22   1.9  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    21   3.3  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         21   5.8  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         21   5.8  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         21   5.8  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         21   5.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   5.8  
AY748848-1|AAV28194.1|  148|Anopheles gambiae cytochrome P450 pr...    20   7.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    20   7.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    20   7.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    20   7.6  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 8   KDRQNKTKHIPTHTHNSVEAAEAFKK---TKDRNSEKAEKCLREV 49
           KDR N    I   + + + A    ++   T    +E+AEK LREV
Sbjct: 128 KDRNNVHAPIKKMSVSILSALSCIERELLTMKLRAERAEKALREV 172


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 5   NRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKC 45
           N IK+ Q +   +     +  E    +++TK +   + +KC
Sbjct: 640 NSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKC 680


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 12 NKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEK 44
          N+T  I   +  + + A+ FK   D N ++A++
Sbjct: 43 NQTNQISGISREARQYADRFKAEADANMKQAQE 75


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 12 NKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEK 44
          N+T  I   +  + + A+ FK   D N ++A++
Sbjct: 43 NQTNQISGISREARQYADRFKAEADANMKQAQE 75


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 12 NKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEK 44
          N+T  I   +  + + A+ FK   D N ++A++
Sbjct: 43 NQTNQISGISREARQYADRFKAEADANMKQAQE 75


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 12 NKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEK 44
          N+T  I   +  + + A+ FK   D N ++A++
Sbjct: 43 NQTNQISGISREARQYADRFKAEADANMKQAQE 75


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 12   NKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEK 44
            N+T  I   +  + + A+ FK   D N ++A++
Sbjct: 1182 NQTNQISGISREARQYADRFKAEADANMKQAQE 1214


>AY748848-1|AAV28194.1|  148|Anopheles gambiae cytochrome P450
          protein.
          Length = 148

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 32 KKTKDRNSEKAEKCLREVIVCAL 54
          K  K+ ++E    C+R + +C+L
Sbjct: 22 KLAKELDNEAGFDCVRYITLCSL 44


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 5   NRIKDRQNKTKHIPTH 20
           NR++D   +T  +P+H
Sbjct: 410 NRLRDISEETSALPSH 425


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 10  RQNKTKHIPTHTHNSVEAAEAFKK 33
           R++    IPTH+H    A +  +K
Sbjct: 118 RRSSLVTIPTHSHFQPTAVQDLRK 141


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 10  RQNKTKHIPTHTHNSVEAAEAFKK 33
           R++    IPTH+H    A +  +K
Sbjct: 119 RRSSLVTIPTHSHFQPTAVQDLRK 142


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.124    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,676
Number of Sequences: 2123
Number of extensions: 1360
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 57
length of database: 516,269
effective HSP length: 36
effective length of query: 21
effective length of database: 439,841
effective search space:  9236661
effective search space used:  9236661
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)