GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001574-TA|BGIBMGA001574-PA|undefined
         (57 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p...    30   1.0  
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p...    30   1.0  
X89430-1|CAA61599.1|  476|Homo sapiens methyl CpG binding protei...    28   4.0  
BC049384-1|AAH49384.1|  669|Homo sapiens KIAA0953 protein protein.     27   7.1  
AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled recep...    27   7.1  
AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein.        27   7.1  
AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein.        27   7.1  
AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein.        27   7.1  
AC012457-1|AAY24353.1|  669|Homo sapiens unknown protein.              27   7.1  
AB032962-1|BAA86450.2|  596|Homo sapiens KIAA1136 protein protein.     27   7.1  
AB023170-1|BAA76797.1|  789|Homo sapiens KIAA0953 protein protein.     27   7.1  
BX537611-1|CAD97798.1|  657|Homo sapiens hypothetical protein pr...    27   9.3  
BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.        27   9.3  
AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.                27   9.3  
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.          27   9.3  
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.          27   9.3  
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ...    27   9.3  
AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and sc...    27   9.3  
AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.     27   9.3  

>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
           protein-C protein.
          Length = 1202

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
           K++ + K++  + K IP  ++N +          ++  EK EK L+EV+
Sbjct: 330 KQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVM 378


>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
           polypeptide-C protein.
          Length = 1288

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
           K++ + K++  + K IP  ++N +          ++  EK EK L+EV+
Sbjct: 416 KQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVM 464


>X89430-1|CAA61599.1|  476|Homo sapiens methyl CpG binding protein
          2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 2  KRINRIKDRQNKTKHIPTH--THNSVEAAEAFKKTKDRNSEKAEKC 45
          K++ + K  + + KH P     H+S E AEA K      S  A  C
Sbjct: 20 KKVKKDKKEEKEGKHEPVQPSAHHSAEPAEAGKAETSEGSGSARLC 65


>BC049384-1|AAH49384.1|  669|Homo sapiens KIAA0953 protein
          protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 15 KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
          +H+      S    +A +K K+  +E AE+CLRE++
Sbjct: 57 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 92


>AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled receptor
            158 protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 11   QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
            +N T  +   +H+  +AAE  +++  +  +KAE CL E
Sbjct: 1035 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1072


>AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein.
          Length = 1215

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 11   QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
            +N T  +   +H+  +AAE  +++  +  +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075


>AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein.
          Length = 1215

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 11   QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
            +N T  +   +H+  +AAE  +++  +  +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075


>AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein.
          Length = 1215

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 11   QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
            +N T  +   +H+  +AAE  +++  +  +KAE CL E
Sbjct: 1038 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 1075


>AC012457-1|AAY24353.1|  669|Homo sapiens unknown protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 15 KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
          +H+      S    +A +K K+  +E AE+CLRE++
Sbjct: 57 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 92


>AB032962-1|BAA86450.2|  596|Homo sapiens KIAA1136 protein protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 11  QNKTKHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLRE 48
           +N T  +   +H+  +AAE  +++  +  +KAE CL E
Sbjct: 419 KNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWE 456


>AB023170-1|BAA76797.1|  789|Homo sapiens KIAA0953 protein protein.
          Length = 789

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 15  KHIPTHTHNSVEAAEAFKKTKDRNSEKAEKCLREVI 50
           +H+      S    +A +K K+  +E AE+CLRE++
Sbjct: 266 QHVEEAESRSPSPLQAPEKEKESPAELAERCLRELL 301


>BX537611-1|CAD97798.1|  657|Homo sapiens hypothetical protein
          protein.
          Length = 657

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2  KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
          K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 46 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 85


>BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.
          Length = 1228

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 617 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 656


>AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675


>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675


>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675


>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
           ATROPHIN-1. ).
          Length = 1064

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 453 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 492


>AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and
           scaffold protein protein.
          Length = 1247

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 636 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 675


>AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.
          Length = 1319

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 2   KRINRIKDRQNKTKHIPTHTHNSVEAAEAFKKTKDRNSEK 41
           K +  + DR N  +H+PT   N  E  + FK  ++ + ++
Sbjct: 708 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDE 747


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.124    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,410,177
Number of Sequences: 224733
Number of extensions: 150450
Number of successful extensions: 582
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 21
length of query: 57
length of database: 73,234,838
effective HSP length: 37
effective length of query: 20
effective length of database: 64,919,717
effective search space: 1298394340
effective search space used: 1298394340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)