GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001572-TA|BGIBMGA001572-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR007502|Helicase-associated region, IPR011709|Protein of unknown
function DUF1605
         (1153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    25   2.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    25   2.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   5.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   5.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    24   5.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    24   5.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    24   5.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   9.1  

>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
            protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 987  TQYELSCDISSYMNSEVYYTIKRLLPGDLKILYYGNDE 1024
            T +EL+  + S++  +    I +L+  ++K  YYGN+E
Sbjct: 336  TDFELA--VPSFLKLQRGSDISKLVAKNIKEFYYGNEE 371


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
            protein.
          Length = 510

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 987  TQYELSCDISSYMNSEVYYTIKRLLPGDLKILYYGNDE 1024
            T +EL+  + S++  +    I +L+  ++K  YYGN+E
Sbjct: 336  TDFELA--VPSFLKLQRGSDISKLVAKNIKEFYYGNEE 371


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 554 TPPEESIENALLELKQHGALTSNEKLTALG 583
           TPPE+  E+    +   GAL+    LT+ G
Sbjct: 668 TPPEDDAESLNQSISSPGALSGLSSLTSPG 697


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 554 TPPEESIENALLELKQHGALTSNEKLTALG 583
           TPPE+  E+    +   GAL+    LT+ G
Sbjct: 560 TPPEDDAESLNQSISSPGALSGLSSLTSPG 589


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
            protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 987  TQYELSCDISSYMNSEVYYTIKRLLPGDLKILYYGNDE 1024
            T +EL+  + +++  +    I +L+  ++K  YYGN+E
Sbjct: 336  TDFELA--VPNFLKLQRGSDISKLVAKNIKEFYYGNEE 371


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
            protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 987  TQYELSCDISSYMNSEVYYTIKRLLPGDLKILYYGNDE 1024
            T +EL+  + +++  +    I +L+  ++K  YYGN+E
Sbjct: 336  TDFELA--VPNFLKLQRGSDISKLVAKNIKEFYYGNEE 371


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
            protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 987  TQYELSCDISSYMNSEVYYTIKRLLPGDLKILYYGNDE 1024
            T +EL+  + +++  +    I +L+  ++K  YYGN+E
Sbjct: 335  TDFELA--VPNFLKLQRGSDISKLVAKNIKEFYYGNEE 370


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 638 ENARKPDESDHGDPLTLLSL 657
           EN +K DESD   P T   L
Sbjct: 78  ENVKKEDESDEEKPTTSFKL 97


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,057
Number of Sequences: 317
Number of extensions: 11159
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 10
length of query: 1153
length of database: 114,650
effective HSP length: 64
effective length of query: 1089
effective length of database: 94,362
effective search space: 102760218
effective search space used: 102760218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)