Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001572-TA|BGIBMGA001572-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR007502|Helicase-associated region, IPR011709|Protein of unknown
function DUF1605
(1153 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 335 2e-92
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 324 4e-89
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 323 1e-88
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 309 2e-84
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 297 7e-81
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 295 2e-80
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 274 5e-74
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 182 3e-46
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 181 4e-46
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 33 0.30
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.53
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 31 0.70
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 30 1.6
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 29 2.8
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 28 6.5
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 28 6.5
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 28 8.6
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 8.6
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 335 bits (823), Expect = 2e-92
Identities = 195/574 (33%), Positives = 323/574 (56%), Gaps = 34/574 (5%)
Query: 163 THKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGF----QNIACTQPR 218
+ K LPV Y+ +++ A+ +V+++ +TG GK+TQ+PQ+LHEAG+ + I CTQPR
Sbjct: 414 SRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPR 473
Query: 219 RIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSET-LPSY 277
R+A +S++ RVA EM + +VGY IRFE + + T I ++T+G+LLR+ +E L SY
Sbjct: 474 RVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASY 533
Query: 278 DVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQV 337
VII+DE HER L D L G++K + R ++K+++ SATI+ + F YF + A V V
Sbjct: 534 SVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYF--DEAPVFYV 591
Query: 338 PGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQI-MQLIDNKYPKDERGDLLIFMSGVQE 396
PGR Y +++ Y P +P + Y+Q + I + GD+L+F++G E
Sbjct: 592 PGRRYPVDIYYTP-----QPEAN-------YIQAAITTILQIHTTQPAGDILVFLTGQDE 639
Query: 397 ITAICDAAQQYA----EKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETS 452
I + + Q+ ++ I+ P+++ L Q K+FD P G RK +++TNIAETS
Sbjct: 640 IELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETS 699
Query: 453 VTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSE 512
+TIDG+ FV+DSG VK+ Y+P + M+ L S+ASADQR GRAGR GPG C+R+Y+
Sbjct: 700 ITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTR 759
Query: 513 QQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHG 571
+ Y +++ ++PE+ R G+N++ F F+D PP E++ +L L G
Sbjct: 760 RTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALG 819
Query: 572 ALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALG-IRSIFTTR 630
AL + +LT LG+ ++ P + L+K+L+ A+ + + L++ + LG S+F
Sbjct: 820 ALNNRGELTKLGRQMAEFPTDPMLSKSLI---ASSKYGCVEEVLSIVSMLGEASSLFYRP 876
Query: 631 AHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTK 690
+ + + AR GD LTLL ++ W+ + +W + ++ + L
Sbjct: 877 KDKIMEADKARANFTQPGGDHLTLLHIWNEWV----DTDFSYNWARENFLQYKSLCRARD 932
Query: 691 LAAQLRGLLQDNNLS-ETPEPETMSSAERALRHG 723
+ QL L + + T E++ ++A+ G
Sbjct: 933 VRDQLANLCERVEIELVTNSSESLDPIKKAITAG 966
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 324 bits (796), Expect = 4e-89
Identities = 191/549 (34%), Positives = 304/549 (55%), Gaps = 30/549 (5%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN----IACTQ 216
++ + LPV R + + AV +++++ G+TG GK+TQ+ QYL E G+ + I CTQ
Sbjct: 504 KEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQ 563
Query: 217 PRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETLPS 276
PRR+A +S++KRVA E+ + +VGY IRFE + T+I ++T+G+L R+ + L S
Sbjct: 564 PRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLS 623
Query: 277 -YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVI 335
Y VIILDE HER + D L G+LK V R ++KL++ SAT++ + F YF +
Sbjct: 624 KYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYK--CPIF 681
Query: 336 QVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQ 395
+PGR Y +E+ Y + D LD + +MQ+ ++ P GD+L+F++G +
Sbjct: 682 TIPGRSYPVEIMYT------KQPEADYLDAA-LMTVMQIHLSEGP----GDILVFLTGQE 730
Query: 396 EITAICDA----AQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAET 451
EI C+ ++ + ++LP++S L Q ++F+ P G RK +I+TNIAET
Sbjct: 731 EIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAET 790
Query: 452 SVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYS 511
S+TIDGI +VVD G VK+ +DP M L IS+A A QR GRAGRTGPG CYR+Y+
Sbjct: 791 SLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYT 850
Query: 512 EQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQH 570
E Y +M P PE+ R G+ND+ F F+D PP +++ AL L
Sbjct: 851 ESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYAL 910
Query: 571 GALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTR 630
AL LT LG+ +++ P+E L+K L+ +++ + L++ A L + +I++
Sbjct: 911 SALDDEGLLTPLGRKMADFPMEPQLSKVLI---TSVELGCSEEMLSIIAMLSVPNIWSRP 967
Query: 631 AHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTK 690
+ + + R + D LTLL++Y W + + +WC I+ + +
Sbjct: 968 REKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSD----NWCYEHYIQARGMRRAED 1023
Query: 691 LAAQLRGLL 699
+ QL L+
Sbjct: 1024 VRKQLIRLM 1032
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 323 bits (793), Expect = 1e-88
Identities = 192/553 (34%), Positives = 304/553 (54%), Gaps = 28/553 (5%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQP 217
R+ + LP R +++S +++ +V+IV G+TG GK+TQ+ Q+L+E G+ I CTQP
Sbjct: 486 REQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQP 545
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPS 276
RR+A +S++KRV+ EM + S VGY IRFE DT I ++T+G+LLR+ + L
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
Y VII+DE HER L D L+G+LK ++ R +IKL++ SAT+N + F ++F A
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGG--APQFT 663
Query: 337 VPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQE 396
+PGR Y ++ I + P D Q++Q+ + GD+L+FM+G ++
Sbjct: 664 IPGRTYPVD-----IMFAKAPCSD--YVEAAVRQVLQI----HLSQPAGDILVFMTGQED 712
Query: 397 ITAICDAAQQYAEKTKN---WIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSV 453
I A C+ + + +LP++S + Q K+FD GVRK +++TNIAETS+
Sbjct: 713 IEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSL 772
Query: 454 TIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQ 513
T+ GI +VVD+G K Y+ + L+ IS+A+A+QR GRAGRTGPG+ YR+Y+E
Sbjct: 773 TVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEM 832
Query: 514 QY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGA 572
Y +M + PE+ R GV ++ F F+D PP +++ +L EL GA
Sbjct: 833 AYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGA 892
Query: 573 LTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAH 632
L + KLT LGK +S P++ SL+K ++I T + + + + L + S+F
Sbjct: 893 LDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCT---EEIITIVSMLSVPSVFYRPKE 949
Query: 633 RDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKLA 692
R + + AR+ D L LL++Y W R SWC + + + L +
Sbjct: 950 RAEESDAAREKFNVPESDHLMLLNIYQHWQR----NGYSNSWCSKHFLHSKTLKRARDIR 1005
Query: 693 AQLRGLLQDNNLS 705
QL ++ +S
Sbjct: 1006 QQLVEIMSKQKIS 1018
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 309 bits (758), Expect = 2e-84
Identities = 200/569 (35%), Positives = 310/569 (54%), Gaps = 44/569 (7%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYL------HEAGFQNIACT 215
+T +ELPV R E + ++++ G+TG GK+TQ+PQ++ H Q IACT
Sbjct: 70 ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQ-IACT 128
Query: 216 QPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETL 274
QPRR+A +S++KRVA EM +VGY IRFE +T + ++T+G+LLR+ M+ L
Sbjct: 129 QPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHML 188
Query: 275 PSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVV 334
Y IILDE HER L D L+G++K L R ++K+++MSAT++ K F++YF A +
Sbjct: 189 SRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFD--APL 246
Query: 335 IQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQI-MQLIDNKYPKDERGDLLIFMSG 393
+ VPGR Y +E+ Y + P RD Y++ ++ + + ++ GD+L+F++G
Sbjct: 247 LAVPGRTYPVEIYYT-----QEPERD-------YLEAALRTVLQIHVEEGPGDILVFLTG 294
Query: 394 VQEITAIC-----DAAQQYAEKTKNWI-VLPLHSGLSLAEQDKVFDYPPEGV-----RKC 442
+EI C +A E + V PL+ L +Q ++F+ PE RK
Sbjct: 295 EEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKV 354
Query: 443 IISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTG 502
+ISTNIAETS+TIDGI +VVD G K+ Y+P +++ L ISKASA QR GRAGRT
Sbjct: 355 VISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTR 414
Query: 503 PGVCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIE 561
PG C+R+Y+E+ + ++ + PE+ R G++D+ F ++D P E++
Sbjct: 415 PGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMM 474
Query: 562 NALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAAL 621
AL EL L N LT LG+ S P++ +LA L+ + + + + L+LTA L
Sbjct: 475 RALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLI---RSPEFYCSNEVLSLTALL 531
Query: 622 GIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIE 681
+ ++F + R+ GD LTLL++Y A+ K+ E G WC +
Sbjct: 532 SVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAY---KSGE-GTADWCWNHFLS 587
Query: 682 EQRLYELTKLAAQLRGLL--QDNNLSETP 708
+ L + QLR + Q+ L TP
Sbjct: 588 HRALISADNVRKQLRRTMERQEVELISTP 616
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 297 bits (728), Expect = 7e-81
Identities = 186/558 (33%), Positives = 301/558 (53%), Gaps = 28/558 (5%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIAC---TQPR 218
+ K LP+ + +Q+ RV++V G+TG GKSTQ+PQ+L+E + C TQPR
Sbjct: 91 EQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPR 150
Query: 219 RIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETLPS-Y 277
R+A V+L+KRVA E + +VGY IRF+ + + T+I ++T+G+LLR++ ++ + S Y
Sbjct: 151 RVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQY 210
Query: 278 DVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQV 337
+ILDE HER LM D LLG +K ++ R +++++MSAT+N + F E+F + A + +
Sbjct: 211 HTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFF--DGAEICYI 268
Query: 338 PGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEI 397
GR Y ++++Y + E D LD ++ I + K GD+L+F++G EI
Sbjct: 269 SGRQYPVQIHYT--YTPE----PDYLDA-----CLRTIFQLHTKLPPGDILVFLTGQDEI 317
Query: 398 TAICDAAQQYAEKTKNWI----VLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSV 453
A+ + Y+++ + + PL + L +Q +VF RK ++STNIAETSV
Sbjct: 318 EALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSV 377
Query: 454 TIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQ 513
TI GIR+V+D+G K ++ ++ L IS+++A QR GRAGR G CYRIY+E
Sbjct: 378 TISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEA 437
Query: 514 QYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGAL 573
+ + + PE+ R+ G NDV F ++D P +E + AL L GAL
Sbjct: 438 DFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGAL 497
Query: 574 TSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAHR 633
N + LG +S +P+ SLA+A++ A + + + + + L S+F +
Sbjct: 498 DDNGHINDLGYQMSLIPLLPSLARAVL---AAREHNCLSEVIDVVSCLSTDSMFLFPQEK 554
Query: 634 DFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKLAA 693
+ AR GD LT L+ +L + R + WC + I + L + +
Sbjct: 555 RDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSR--KQWCSQNFINRRALKTILDIRK 612
Query: 694 QLR-GLLQDN-NLSETPE 709
QLR L+D L+ +PE
Sbjct: 613 QLREHCLKDGWELNSSPE 630
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 295 bits (724), Expect = 2e-80
Identities = 183/541 (33%), Positives = 309/541 (57%), Gaps = 27/541 (4%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGF--QN--IACTQPRRI 220
K LP+ YR++++ AV+ ++ IV G TGCGK+TQ+PQ+L+EAG+ QN I CTQPRR+
Sbjct: 23 KLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRL 82
Query: 221 ACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETL-PSYDV 279
S+S+RV+ E+ + S GY I+F+ + + TKI ++T+G+LL ++ + L Y +
Sbjct: 83 VAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSI 142
Query: 280 IILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQVPG 339
+ILDE+HER L D LLG+LK ++ R + +LVL SA+++ ++F + + + G
Sbjct: 143 VILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEG 202
Query: 340 RLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEIT- 398
+L+ +E +F++ +PT ++ +D ++ + I++ YP GD+L+F+SG +EI
Sbjct: 203 KLFPVET----LFLQ-KPT-ENYVDSA--IETVININSTYPP---GDILVFLSGRKEIEY 251
Query: 399 ---AICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTI 455
I D+ +E + + LPLH+GL++ EQ +VF+ RK I STNIAETS+TI
Sbjct: 252 CIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITI 311
Query: 456 DGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY 515
DGI +VVDSG K+ Y+P ++ +L ISK+SA QR GRAGRT G +R+Y+E+ Y
Sbjct: 312 DGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY 371
Query: 516 TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALTS 575
+ M+ ++ G+ ++ +FPF PP + AL +L G L
Sbjct: 372 SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDE 431
Query: 576 NEKLT-ALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAHRD 634
+ LT LG +SN ++ +++KAL+ + TH+ S ++ A + + +
Sbjct: 432 SGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEV--FYNPTSSSK 489
Query: 635 FDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQ 694
D A ++ GD +T L+++ +++ K + WC++ + Q L + +
Sbjct: 490 NDAFVAHSSFFANEGDIITALNVFESFVGNKKD----LQWCRKNYLNYQTLRQALDIRTH 545
Query: 695 L 695
L
Sbjct: 546 L 546
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 274 bits (672), Expect = 5e-74
Identities = 194/562 (34%), Positives = 299/562 (53%), Gaps = 52/562 (9%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYL--H-----EAGFQNIACTQP 217
++LP R +I+ A+Q+ +VV+++G+TG GKSTQV Q++ H E Q + CTQP
Sbjct: 575 EKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQP 634
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETL--- 274
RRI+ +SL++RVA+E T +VGY + EKS + +T + F T GLLLR++ L
Sbjct: 635 RRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFL 694
Query: 275 PSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVV 334
+ +++DE+HER + D LL +LK ++ N+K++LMSAT+N F+ YF + A
Sbjct: 695 STLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGN--AGH 752
Query: 335 IQVPGRLYTIELNYKPIFMEERPTRDDRLD-PQ--------PYVQIMQLIDNKYPK--DE 383
+ + GR + I+ Y F + DD D P+ Y I +L+ + +
Sbjct: 753 LHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGSS 812
Query: 384 RGDLLIFMSGVQEITAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCI 443
G +L+F+ GV I A C + + +K + VLPLH+ L+ +EQ + F + RK I
Sbjct: 813 SGSILVFLPGVSNI-ARCIREIKSKDGSK-FEVLPLHASLNTSEQRRCFKTYTK--RKII 868
Query: 444 ISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGP 503
+TNIAETS+TID + V+DSG+VK++ YD + KE W S+A+ QR+GRAGR
Sbjct: 869 CATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKK 928
Query: 504 GVCYRIYSEQ-QYTDMEPFSTPEVSR---------VPXXXXXXXXXXXGVN--DVRRF-- 549
G+CY++Y+ + M + PEV R V VN +++F
Sbjct: 929 GICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKKFMN 988
Query: 550 PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTH 609
ID P + +++ AL +L Q GALT +E LT LG+ L +LP+++ L K LV GS
Sbjct: 989 SLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSI---FG 1045
Query: 610 KRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEER 669
+ AL +TA L +S F D + R GD L +Y WL + E R
Sbjct: 1046 YLEPALTITAILSTKSPFL----GDDEAREIRSKQSQGWGDVLADARVYHNWLEI-LETR 1100
Query: 670 GGR---SWCKRRGIEEQRLYEL 688
G + WC+ + L ++
Sbjct: 1101 GVKKTVQWCEEMHLHYTTLQQI 1122
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 182 bits (443), Expect = 3e-46
Identities = 100/276 (36%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 374 LIDNKYPKDERGDLLIFMSGVQEITAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFD 433
++ K E DL + ++ ++ Y ++++ VLPL+S L+ +Q KVFD
Sbjct: 662 VVSRKTMSVENEDLQSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFD 721
Query: 434 YPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQ 493
PEG R CI++TN+AETS+TI IR+VVD GK KE Y+ + +Q+ + WISKA+ADQ
Sbjct: 722 SSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQ 781
Query: 494 RKGRAGRTGPGVCYRIYSEQQYTDMEPF-STPEVSRVPXXXXXXXXXXXGVNDVRRFPFI 552
R GRAGRTGPG CYR+YS + P S PE+ R P ++++ FPF
Sbjct: 782 RAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFP 841
Query: 553 DTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRD 612
+P +E +L L GA+ S LT LG+ +S P+ +K L+IG Q
Sbjct: 842 TSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQ---QHGCLP 898
Query: 613 SALALTAALGIRSIFTTRAHRDFDCENAR-KPDESD 647
+AL +AL I +F ++ +D + + +E+D
Sbjct: 899 YVIALVSALSINQLFVSKQSLLYDAHDKNSRSEETD 934
Score = 153 bits (372), Expect = 1e-37
Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 31/261 (11%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN--------I 212
+++ LP+ I+ + VVI+ G TG GK+TQ+PQ+L EAGF + I
Sbjct: 392 QESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMI 451
Query: 213 ACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE 272
A TQPRR+A VS++KRV+ E LT F SKV YQIRF+ + DT I F+T+G+LLR++SS+
Sbjct: 452 AITQPRRVAAVSIAKRVSEE-LTGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSD 510
Query: 273 -TLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTN----------IKLVLMSATINIK 321
L +Y +I+DE HER + D LLG+L +V R +KL++MSAT+ +
Sbjct: 511 FLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVT 570
Query: 322 LFEEYFASESAVVIQVPGRLYTIELNYKPIFME-ERPTRDDRLDPQPYVQIMQLIDNKYP 380
F SE+ ++ VP + I+ P+ + R T+ D L Q + LI + P
Sbjct: 571 DF-----SENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYL--QDAFDKVCLIHKRLP 623
Query: 381 KDERGDLLIFMSGVQEITAIC 401
G +L+F++G QE+ +C
Sbjct: 624 ---AGSILVFLTGQQEVEQLC 641
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 181 bits (441), Expect = 4e-46
Identities = 116/343 (33%), Positives = 176/343 (51%), Gaps = 12/343 (3%)
Query: 387 LLIFMSGVQEITAICDAAQQYA--EKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCII 444
+L+F+ G+ EI + + + + + LHS LS A+Q VF+ PP+G RK ++
Sbjct: 906 VLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVL 965
Query: 445 STNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPG 504
STNIAET VTI + V+D+G +EM Y+ + RL + ++SKA+A QR GRAGR G
Sbjct: 966 STNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEG 1025
Query: 505 VCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF--PFIDTPPEESIE 561
+CY ++S+ ++ T + TPE+ R+ + DV+ +D P +I
Sbjct: 1026 ICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNII 1085
Query: 562 NALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAAL 621
AL +L Q GAL+ NEKLT LGK LS LPV+ +L K LV+G D+A ++ A L
Sbjct: 1086 RALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCV---DAASSIVAML 1142
Query: 622 GIRSIFTTRAHRDFDCENARK--PDESDHGDPLTLLSLYCAWLRVKAEERG--GRSWCKR 677
I S F +F AR E+ D + + YCAW + G S+ K
Sbjct: 1143 TIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKE 1202
Query: 678 RGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERAL 720
+ + + L L QL L+D L + +T S +R++
Sbjct: 1203 KYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSI 1245
Score = 127 bits (306), Expect = 1e-29
Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 166 ELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN-----IACTQPRRI 220
+LP +R I+ AV N +++I++GDTGCGKSTQ+P +L E +N I T+PRRI
Sbjct: 630 QLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPRRI 689
Query: 221 ACVSLSKRVAYEM-----LTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMS-SETL 274
+ +SL+ RV+ E+ + VGY +R + T T + ++T G LR + +
Sbjct: 690 SAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEI 749
Query: 275 PSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVV 334
S +I+DE+HER + D LL + L+ ++K+++MSAT+N + F+ YF E + +
Sbjct: 750 ESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYF--EGSNL 807
Query: 335 IQVPGRLYTIELNY 348
I +PG+ Y + Y
Sbjct: 808 ITIPGKTYPVHRFY 821
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 711 ETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRKKRLKIDSWE 755
++ SSA++ +G+ K+ + +R K+K+ ED K++ KI +E
Sbjct: 465 DSKSSAKQGKGNGRAKETPEEKRARKKKTKEDKAEKRKSKIPKYE 509
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 662 LRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALR 721
+R K ++R + K EE++ E +LA Q Q ++ E E+ L+
Sbjct: 591 IREKEKKRDKKKQLKLAKEEERQRREAERLAEQAA---QKALEAKRQEEARKKREEQRLK 647
Query: 722 HGQMKQLKDMRRQYKQKSAEDSKRKKRLK 750
Q K+ +++ RQ +++ + +R+K+LK
Sbjct: 648 REQEKKQQELERQKREEKQKQKEREKKLK 676
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 184 RVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRI 220
R++++ G +GCGKST V E G+ I P +
Sbjct: 106 RLLLICGPSGCGKSTAVQVLAKELGYSLIEWLNPMNL 142
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 674 WCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQLKD-MR 732
W K+R +EEQ L E + +Q R + L + E E+ + ++LKD
Sbjct: 79 WAKKRNVEEQNLIEQSITESQ-RIFSEKQRLEQ--ERFNRELLEKKRIEAERQRLKDEEE 135
Query: 733 RQYKQKSAEDSKRKKRLKI 751
R+ K+ ++ K K+R+++
Sbjct: 136 RRKKELMEKEKKEKERIRL 154
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 828 EQLYHTWSKPFVFLHPTSYFGKQPRVLMLTEADIQTDPPAGYKSKLPLSAKHQLLCYLSL 887
+ +Y T + F+F PT K PR L + A + G K+ +P K ++ + ++
Sbjct: 208 QAVYKTGIRDFMFSAPTKEPTKHPRDLTMIVAVSSPNLGIGKKNSMPWHIKQEMAYFANV 267
Query: 888 LETTK 892
+T+
Sbjct: 268 TSSTE 272
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 464 SGKVKEMSYDPTSKMQRLKEFWISK 488
S VKEM DP S + EFW+ K
Sbjct: 161 SDLVKEMEKDPASLQAKENEFWLKK 185
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 711 ETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRKKR 748
++M SAER + + KD R +Y + E +K++KR
Sbjct: 74 DSMKSAEREQMELKRLESKDRRPKYMENLIESAKKRKR 111
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 884 YLSLLETTKPYIVNSMRMPAAQTLLLLAHSIDT 916
YL+LLE KP+++ + +P L L+ I+T
Sbjct: 72 YLALLENEKPFVLKRIYVPDKTALQLVHGEIET 104
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 685 LYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQL 728
LY L K A+LR L ++ +SE P PE + S + ++ H Q +L
Sbjct: 124 LYSLEK--AKLR-LKKEREISEIPVPEIVLSGKSSIEHLQKAEL 164
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,120,547
Number of Sequences: 5004
Number of extensions: 214897
Number of successful extensions: 707
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 630
Number of HSP's gapped (non-prelim): 32
length of query: 1153
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1072
effective length of database: 1,957,154
effective search space: 2098069088
effective search space used: 2098069088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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