Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001572-TA|BGIBMGA001572-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR007502|Helicase-associated region, IPR011709|Protein of unknown
function DUF1605
(1153 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 3e-84
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 195 2e-49
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-40
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 159 9e-39
SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26) 153 6e-37
SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 1e-36
SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21) 145 2e-34
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-33
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 8e-33
SB_47261| Best HMM Match : HA2 (HMM E-Value=5.8e-16) 133 9e-31
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 129 1e-29
SB_683| Best HMM Match : zf-C2H2 (HMM E-Value=0.85) 126 8e-29
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 3e-23
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 106 1e-22
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 88 3e-17
SB_1256| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-15
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 71 5e-12
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 71 7e-12
SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 4e-11
SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5) 42 0.002
SB_15717| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.58
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.76
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 34 0.76
SB_20945| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.76
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 33 1.8
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.1
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.1
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 31 4.1
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.4
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 31 5.4
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 31 5.4
SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.1
SB_34450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.1
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 31 7.1
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 31 7.1
SB_19207| Best HMM Match : ig (HMM E-Value=1.2e-11) 31 7.1
SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.4
SB_33763| Best HMM Match : RVT_1 (HMM E-Value=3.1e-17) 30 9.4
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 9.4
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 310 bits (762), Expect = 3e-84
Identities = 199/547 (36%), Positives = 307/547 (56%), Gaps = 37/547 (6%)
Query: 167 LPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQPRRIACV 223
LP+ + R +++ ++N + VI+ G+TG GK+TQ+PQYL+EA IACTQPRR+A +
Sbjct: 58 LPIFSARKSLITEIRNRQNVIIVGETGSGKTTQIPQYLYEAKVARNSVIACTQPRRVAAI 117
Query: 224 SLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETL-PSYDVIIL 282
S+++RV+ EM Q +VGY +RFE ++ T+I ++T+G+LLR+ ++L Y VIIL
Sbjct: 118 SIAQRVSREMGVQLGEEVGYTVRFEDVTSTKTRIKYMTDGMLLRESIGDSLLKRYSVIIL 177
Query: 283 DEIHERHLMGDFLLGILKCLVHTRTN-----IKLVLMSATINIKLFEEYFASESAVVIQV 337
DE HER + D L GI+K +R + +K+V+MSAT+ F EYF S A V+ +
Sbjct: 178 DEAHERTIHTDVLFGIVKGAQISRKDKGMLPLKIVVMSATLEAHQFSEYFGS--AEVLYI 235
Query: 338 PGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEI 397
GR + +EL Y P D + IMQL K P GD+L+F++G EI
Sbjct: 236 EGRQHPVELMYAV-----EPQVDYM--HAALITIMQLHQEK-PLG--GDILVFLTGQDEI 285
Query: 398 TA----ICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSV 453
+ + D + +V P+ + L ++Q +VF G RK I+STNIAETSV
Sbjct: 286 ESLSKLVSDCSLHCPPDCPQLLVCPMFAALPSSQQMQVFRPAIPGARKVILSTNIAETSV 345
Query: 454 TIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQ 513
TI G+++V+D+G VK + P + + L+ +SKA A QR GRAGR GVCYR+Y+E+
Sbjct: 346 TIPGVKYVIDTGYVKAKGFHPKTGLDMLRVQPVSKAQARQRLGRAGRECSGVCYRLYTEE 405
Query: 514 QYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGAL 573
Q+ + + PE+ R G+ D+ F F+D P ++I+ AL +L AL
Sbjct: 406 QFEQLAEATVPEIQRCNLSSVILQLMALGIADIASFDFMDKPSADAIDGALKQLVILEAL 465
Query: 574 ---TSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSI-FTT 629
+ KLT+LG+ ++ P+E LAK +++ S TL + L + A L + SI +T
Sbjct: 466 QEINGDYKLTSLGQKMAQFPLEPRLAK-VILASETLGC--SEEILTVVALLSVDSITYTP 522
Query: 630 RAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELT 689
++ RD + RK S GD +TLL++Y A+ + +SWC I + + +
Sbjct: 523 QSKRDHALK-VRKKFLSSEGDQITLLNIYRAYKQCGM----NKSWCAEHFINTRVMKLVM 577
Query: 690 KLAAQLR 696
+ QLR
Sbjct: 578 DIRKQLR 584
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 195 bits (475), Expect = 2e-49
Identities = 135/386 (34%), Positives = 199/386 (51%), Gaps = 27/386 (6%)
Query: 307 TNIKLVLMSATINIKLFEEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDP- 365
T + ++ SATIN KLF++YF V++V GR + +E+ +K D L+
Sbjct: 839 TRSESIITSATINPKLFQDYFGGSP--VVEVSGRTFPVEVVWKQ--------GDSSLNSG 888
Query: 366 QPYV-QIMQLIDNKYPKDERGDLLIFMSGVQEITAICDAAQQYAEKTK--NWIVLPLHSG 422
YV + ++ + + +E GD+L+F++ EI A + K I LPLH
Sbjct: 889 SDYVSEAIEKVLEIHRTEEPGDVLVFLTCPAEIDR---AVTKVCSKVNPLEVICLPLHGK 945
Query: 423 LSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLK 482
L +Q KVF P G RK + STN AETS+TI G++FVVD+G KEM Y+ + L+
Sbjct: 946 LLQEDQQKVFQQFP-GKRKVVFSTNCAETSITIPGVKFVVDTGMAKEMKYEEKRGLNILE 1004
Query: 483 EFWISKASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXG 542
IS++SADQRKGRAGRT G CYR+Y+E+ YT ME + PE+ RV G
Sbjct: 1005 VSVISRSSADQRKGRAGRTDSGKCYRLYTEKDYTAMEKCAQPEILRVHLGQTLVKLMDLG 1064
Query: 543 VNDVRRFPFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIG 602
++D +F +++ P +ESI A+ L Q GA+ + LT LG+ LS +P+E L + L G
Sbjct: 1065 ISDPFKFDYVEAPSKESINRAVASLVQLGAI-KDGSLTELGRKLSKVPLEPRLGRLLFEG 1123
Query: 603 SATLQTHKRDSALALTAALGIR-SIFTTRAHRDFDCENARKPDE--SDHGDPLTLLSLYC 659
+ + L L + + S+F D E E GD LTLL++Y
Sbjct: 1124 ---IDSQVGLECLVLCSVATVNGSVFFRMGTEDEKKEADMHKFEFCQSEGDFLTLLAVYK 1180
Query: 660 AWLRVKAEERGGRSWCKRRGIEEQRL 685
W +RG WC + + + L
Sbjct: 1181 EWWNEDPRDRG--RWCFEKSLNAKAL 1204
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQP 217
R+ LP+ + +I+ +++ +V ++ G+TG GKSTQ+ QYL++AG + I CTQP
Sbjct: 717 RRLESALPIYARKSQIIQTIKDNQVTVLIGETGSGKSTQIGQYLYDAGLADKGQIVCTQP 776
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQ 244
R++A SL+++V+ EM + VGY+
Sbjct: 777 RKVAATSLAQQVSREMGQKVGKLVGYR 803
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 165 bits (401), Expect = 2e-40
Identities = 160/584 (27%), Positives = 258/584 (44%), Gaps = 67/584 (11%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQPR 218
Q + LP+ R E+V AV +V+IV G+TG GK+TQ+ QYL E GF +ACTQPR
Sbjct: 273 QQREGLPIFKLRDELVKAVHQNQVLIVIGETGSGKTTQITQYLAEQGFLTQGKLACTQPR 332
Query: 219 RIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPSY 277
R+A +S++KRV+ E + +VGY IRFE + +TKI ++T+G LLR+ + L Y
Sbjct: 333 RVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGFLLRECLIDPELKQY 392
Query: 278 DVIILDEIHERHLMGDFLL-----GILKCL-VHTRTNIK-----LVLMSAT--------- 317
VI+LDE HER + D LL G L + T N K VLM T
Sbjct: 393 SVIMLDEAHERVIHTDVLLWLDEKGAFAVLALATIENSKCFGHFCVLMHGTRCPDFPSMW 452
Query: 318 INIKLFEEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDN 377
+ Y A + +PGR + +E+ Y + D LD + +MQ+
Sbjct: 453 HTLSCSYVYRRGYKAPIFTIPGRTFPVEILY------TKEAESDYLD-AALITVMQIHLT 505
Query: 378 KYPKDERGDLLIFMSGVQEITAICDAAQQYAEK----TKNWIVLPLHSGLSLAEQDKVFD 433
+ P GD+L+F++G +EI C+ + + I+LP++S L Q ++FD
Sbjct: 506 EPP----GDILVFLTGQEEIDTACEILYERTKSLGPDVPELIILPVYSALPSEMQTRIFD 561
Query: 434 YPPEGVRK-------CIISTNIAETSVTIDGIRFV-------VDSGKVKEMSYDPTSKMQ 479
P G RK C A V I + V +++ V +YD ++
Sbjct: 562 PAPPGSRKRASHSKLCHGGHGSALRMVNIVMVPTVARVAWSYLENNNVLPTAYDTIGDLK 621
Query: 480 RLKE---FWISKASADQRKGRAGRTGPGVCYRIYSEQQYTDMEP-FSTPEVSRVPXXXXX 535
R E S A+ G+ GR G + + + TD P ++ V
Sbjct: 622 RSYERIHRRQSLATLITSIGQIGRLDIGK-FAATTADRLTDFLPRLNSDRVELAGRGLES 680
Query: 536 XXXXXXGVN-DVRRFPFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVS 594
++R +P + I +A+ L AL + LT LG+ ++ P+E
Sbjct: 681 ATVCTQSARIEMRCWPPLSRRSSTMI-SAMEALHSLSALDNEGLLTRLGRRMAEFPLEPQ 739
Query: 595 LAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTL 654
L+K L+ ++ D L + + L ++++F + + + GD LTL
Sbjct: 740 LSKMLI---QSVHLGCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTL 796
Query: 655 LSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGL 698
L++Y +W + +WC ++ + L + Q+ L
Sbjct: 797 LAVYNSW----KNNKFSNAWCFENFVQARSLRRAQDIRKQIHKL 836
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 159 bits (387), Expect = 9e-39
Identities = 99/287 (34%), Positives = 161/287 (56%), Gaps = 32/287 (11%)
Query: 302 LVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDD 361
+V R ++KL++ SAT++ + F ++F + ++PGR + +E+ + ME D
Sbjct: 699 VVSRRRDLKLIVTSATMDAQKFADFFGN--VPTYKIPGRTFPVEIFFTRTVME------D 750
Query: 362 RLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEITAICDAAQQYAEKTKNWIVLPLHS 421
+D Q +Q+ + P ER ++ V+E + VLP++S
Sbjct: 751 YVD-SAVKQALQI--HLTPSKER------LAEVEEAPPLA--------------VLPIYS 787
Query: 422 GLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRL 481
L Q K+F P+GVRKC+++TNIAETS+T+DGI FV+D+G K Y+P M L
Sbjct: 788 QLPSDLQAKIFQKAPDGVRKCVVATNIAETSLTVDGIMFVIDAGYCKLKVYNPKIGMDAL 847
Query: 482 KEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXX 540
+ + IS+A+A+QR GRAGRTGPG C+R+Y+E Y +++ + PE+ R
Sbjct: 848 QVYPISQANANQRSGRAGRTGPGQCFRLYTENSYNSELLATTIPEIQRTNLANVVLLLKS 907
Query: 541 XGVNDVRRFPFIDTPPEESIENALLELKQHGALTSNEKLTALGKALS 587
GV ++ F F+D PP+E+I N++ +L GAL + LT LG+ ++
Sbjct: 908 LGVQNLLEFHFMDPPPQENILNSMYQLWILGALDNTGSLTPLGRQMT 954
Score = 93.9 bits (223), Expect = 7e-19
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQPR 218
Q + LP+ R E++S V++ +VVI+ G+TG GK+TQ+ QY+HE G+ N I CTQPR
Sbjct: 604 QQRQYLPIFAVRQELLSIVRDNQVVIIVGETGSGKTTQLTQYMHEDGYTNYGMIGCTQPR 663
Query: 219 RIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSD 254
R+A +S++KRV+ EM +VGY IRFE TSD
Sbjct: 664 RVAAMSVAKRVSEEMDCSLGEEVGYAIRFE-DVTSD 698
>SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26)
Length = 355
Score = 153 bits (372), Expect = 6e-37
Identities = 93/280 (33%), Positives = 144/280 (51%), Gaps = 6/280 (2%)
Query: 385 GDLLIFMSGVQEITAICDAAQQYAE-KTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCI 443
G +LIF+ G I A+ + + + T N+ +LPLHS + +Q +VF+ PEGV K I
Sbjct: 45 GAVLIFLPGWNLIFALHKHLKMHPQFGTPNYRLLPLHSQIPREDQRRVFEPVPEGVTKII 104
Query: 444 ISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGP 503
+STNIAETS+TID + FV+DS K K + + M W S+ + +QR+GRAGR P
Sbjct: 105 LSTNIAETSITIDDVVFVIDSVKAKVKLFTSHNNMTNYATVWASQTNMEQRRGRAGRVRP 164
Query: 504 GVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF--PFIDTPPEESIE 561
G + + S + + +TPE+ R P + D+ F I+ PP +++
Sbjct: 165 GFAFHLCSRARADRLAEHATPEILRTPLHELALTIKLLKLGDITAFLNNAIEPPPLDAVV 224
Query: 562 NALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAAL 621
++ LK AL +NE LT LG L+ LP+E L K +++G H D+ + A+
Sbjct: 225 ESVAMLKDMEALDTNENLTPLGYMLAKLPIEPRLGKMVILGCI---FHCGDAMATIAAST 281
Query: 622 GIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAW 661
F T + R +K + H D + +LS + AW
Sbjct: 282 SFPEPFETPSDRRRLGWVHKKFSGTRHSDHIAMLSAFQAW 321
>SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 152 bits (369), Expect = 1e-36
Identities = 92/215 (42%), Positives = 128/215 (59%), Gaps = 18/215 (8%)
Query: 70 DFWIFLKKYEATLKK---SGKPLL-EP--NCGKDI-IDTNSEKFHCINFTS-SMKFIDTV 121
DFW F ++YE+ +K S K + EP N + + + N +K + +N + S + V
Sbjct: 55 DFWHFFERYESFQRKRSLSKKDVKKEPSNNVSQKLGLPVNYDKRYRVNVSVLSGDIAELV 114
Query: 122 CESGSRKKLNRK------IFDA----FLEIVSIYLDXXXXXXXXXXXXXRQTHKELPVAN 171
S + KL K + +A F ++ Y+D ++ LP++
Sbjct: 115 RPSHHKGKLKEKEPKYRGLTEANIAEFRSVLLYYIDFCQKQKFNKLAKLKRDQTNLPISQ 174
Query: 172 YRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLSKRVAY 231
+R +IV AV+N +VVI+AGDTGCGKSTQVPQYL AGF IACTQPRRIAC+SL+KRV +
Sbjct: 175 FRQQIVDAVKNHQVVIIAGDTGCGKSTQVPQYLLHAGFTEIACTQPRRIACISLAKRVGF 234
Query: 232 EMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLL 266
E L ++ S+V YQIRFE SKTS T+I F+TE LL
Sbjct: 235 ETLNEYGSEVAYQIRFEGSKTSATRILFLTEACLL 269
>SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21)
Length = 422
Score = 145 bits (351), Expect = 2e-34
Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 10/219 (4%)
Query: 417 LPLHSGLSLAEQDKVFDY-PPE---GV--RKCIISTNIAETSVTIDGIRFVVDSGKVKEM 470
+PL+S L +Q ++F+ PP+ G RKC+++TNIAETS+TIDG+ FV+D G K+
Sbjct: 126 IPLYSTLPPTQQQRIFEAAPPDRPNGAIGRKCVVATNIAETSLTIDGVVFVIDPGFSKQK 185
Query: 471 SYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY-TDMEPFSTPEVSRV 529
Y+P +++ L IS+ASA QR GRAGRT PG C+R+Y+E+ + +M P + PE+ R
Sbjct: 186 VYNPRIRVESLLVSAISRASAQQRAGRAGRTRPGKCFRLYTEKAFQEEMPPNTYPEILRS 245
Query: 530 PXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNL 589
G++D+ F F+D P E++ AL L GAL N LT LG ++
Sbjct: 246 NLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDNGDLTELGSMMAEF 305
Query: 590 PVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFT 628
P++ LAK ++ A+ + + + L++T+ L R T
Sbjct: 306 PLDPQLAKMVI---ASCEFNCSNEILSITSMLSARQPVT 341
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 142 bits (343), Expect = 2e-33
Identities = 86/246 (34%), Positives = 146/246 (59%), Gaps = 22/246 (8%)
Query: 166 ELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQPRRIAC 222
+LP+ I+ A+ VVI+ G+TG GK+TQVPQ+L+EAG+ I T+PRR+A
Sbjct: 293 QLPILAEEQAIMEAISENNVVILCGETGSGKTTQVPQFLYEAGYTKRGLIGITEPRRVAA 352
Query: 223 VSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETLPS-YDVII 281
VS+S+RVA EM + SKV YQIR++ + + +T I F+T+G++L+++ + L S Y V++
Sbjct: 353 VSMSQRVAKEM-SMPTSKVSYQIRYQGNTSDETVIKFMTDGVMLKEVEKDFLLSKYSVVV 411
Query: 282 LDEIHERHLMGDFLLGILKCLVHTR----TNIKLVLMSATINIKLF--EEYFASESAVVI 335
+DE HER + D L+G+L +V R +KLV+MSAT+ ++ F + + I
Sbjct: 412 IDEAHERSVYTDILIGLLSRIVPLRAKQGNKLKLVIMSATLRVEDFTSNTKLFPDPPITI 471
Query: 336 QVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQ 395
+V R + + +++ + T DD + + + ++ + I P G +L+F++G
Sbjct: 472 KVDSRQFPVTVHF------SKRTPDDYIQ-EAFRKVCK-IHRTLPS---GGILLFVTGQN 520
Query: 396 EITAIC 401
EI +C
Sbjct: 521 EIHGLC 526
Score = 142 bits (343), Expect = 2e-33
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 12/221 (5%)
Query: 416 VLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPT 475
VLPL+S LS EQ KVF P G R C+++TN+AETS+TI I++VVD+G VK YD
Sbjct: 599 VLPLYSLLSSKEQAKVFQQSPGGARLCVVATNVAETSLTIPNIKYVVDTGMVKRRYYDKV 658
Query: 476 SKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQYT-DMEPFSTPEVSRVPXXXX 534
+ + + W SKASA+QR GRAGR PG CYR+YS +T + +S ++ R P
Sbjct: 659 TGVSSFRITWTSKASANQRAGRAGRVEPGHCYRLYSSAVFTNEFVEYSEADIVRCPVDDL 718
Query: 535 XXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALTSNEK--------LTALGKAL 586
++ V FPF P ++E A L GAL + ++ LG A+
Sbjct: 719 VLQMKSMNIDKVVNFPFPTPPSSSALETAEKLLLDLGALEERKTVKGNISAVISPLGSAM 778
Query: 587 SNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIF 627
+ PV AK L +G Q + +A+ AAL ++ IF
Sbjct: 779 AKFPVLPRYAKMLCLGH---QESCMEFIIAIIAALTVKEIF 816
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 140 bits (338), Expect = 8e-33
Identities = 94/291 (32%), Positives = 143/291 (49%), Gaps = 14/291 (4%)
Query: 443 IISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTG 502
I++TNIAETS+TIDGI +V+D G K+ SY+P + M+ L ISKASA+QR GRAGR
Sbjct: 314 ILATNIAETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISKASANQRAGRAGRVN 373
Query: 503 PGVCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIE 561
G C+R+Y+ Y ++E + PE+ R G+ND+ F F+D PP E++
Sbjct: 374 AGKCFRLYTAWAYNNELEENTIPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPAETLI 433
Query: 562 NALLELKQHGALTSNEKLTALGKALS--------NLPVEVSLAKALVIGSATLQTHKRDS 613
AL +L GAL + +LT + S P A + S+ + R+
Sbjct: 434 LALEQLYALGALNHHGELTKVCTLRSCSFLYYVLRRPRYTGYAGMIANRSSAPRPFARNR 493
Query: 614 ALALTAALGI-RSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGR 672
L + A L + +IF + +NAR GD LTLL++Y W AE
Sbjct: 494 MLTIIAMLSVNNAIFYRPKDKIVHADNARTNFFRPGGDHLTLLNVYDQW----AETDYST 549
Query: 673 SWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
WC I+ + + + QL GL++ + + P ++ +A+ G
Sbjct: 550 QWCYENFIQHRSMKRARDVREQLEGLIERAEIEMSSNPGDFTAIRKAVTAG 600
Score = 79.8 bits (188), Expect = 1e-14
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 15/153 (9%)
Query: 259 FITEGLLLRQMSSET-LPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSAT 317
++T+G+LLR+ E L SY V+I+DE HER L D L G++K + R +IKL++ SAT
Sbjct: 182 YMTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPDIKLIISSAT 241
Query: 318 INIKLFEEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDN 377
++ F +F + A + ++PGR + +++ Y + D LD V ++Q+
Sbjct: 242 LDADKFSSFF--DDAPIFRIPGRRFPVDIYY------TKAPEADYLD-ATVVTVLQI--- 289
Query: 378 KYPKDERGDLLIFMSGVQEI-TAICDAAQQYAE 409
+ GD+L+F++G +EI TA A AE
Sbjct: 290 -HITQPDGDVLVFLTGQEEIETAQVILATNIAE 321
Score = 56.8 bits (131), Expect = 9e-08
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEA 207
+ LPV YR E++ A+ +V+I+ G+TG GK+TQ+PQYL+EA
Sbjct: 127 RSLPVYGYREELLEAISEHQVLIIEGETGSGKTTQIPQYLYEA 169
>SB_47261| Best HMM Match : HA2 (HMM E-Value=5.8e-16)
Length = 351
Score = 133 bits (321), Expect = 9e-31
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 571 GALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTR 630
GALT +E +T +G+ LS LPV+V + K L++GS H D + + A L ++S +T R
Sbjct: 122 GALTEDEAITPVGQMLSRLPVDVVIGKMLLMGSVF---HVTDPVMIIAAGLSVQSPWTRR 178
Query: 631 AHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEE-RGGRSWCKRRGIEEQRLYELT 689
D D RK ESDHGDP TLL+ Y W++VK+ + G + WC+RRG+EEQR YE++
Sbjct: 179 LDHDPDVMALRKELESDHGDPFTLLNAYDEWIQVKSRQGSGSKKWCRRRGLEEQRFYEMS 238
Query: 690 KLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRKKRL 749
KL Q LL D+ L + + ER + +QL ++R+++ ++R+K L
Sbjct: 239 KLKRQFEDLLVDHGLIQRETKDDSDDDEREREKYKRRQLXRLKREHQ----TSTRRRKLL 294
Query: 750 KIDSWE 755
K++ E
Sbjct: 295 KLEEDE 300
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 542 GVNDVRRFPFIDTPPEESIENALLELKQHGAL 573
G+NDVR FPFI+ P SIEN++ L+Q G+L
Sbjct: 2 GINDVRAFPFIEPRPRSSIENSVHFLQQQGSL 33
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 129 bits (311), Expect = 1e-29
Identities = 64/163 (39%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 194 CGKSTQVPQYLHEAGFQ-------NIACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIR 246
CGK+TQ+PQ++ ++ + NI CTQPRRI+ +S+++RVA E + VG+++R
Sbjct: 2 CGKTTQIPQFILDSYLEREKGAGCNIICTQPRRISAMSVAERVAAERAEKLGDSVGFKVR 61
Query: 247 FEKSKTSDTKICFITEGLLLRQMSSE-TLPSYDVIILDEIHERHLMGDFLLGILKCLVHT 305
E ++S T++ + T G+LLR S+ TL +++DE+HER DFL+ +L+ L+
Sbjct: 62 LESKQSSSTRLLYCTTGILLRYFESDSTLAGVSHVVVDEVHERTEESDFLMMVLRDLIME 121
Query: 306 RTNIKLVLMSATINIKLFEEYFASESAVVIQVPGRLYTIELNY 348
R +++++LMSAT++ KLF EYF A VI +PGR + + Y
Sbjct: 122 RPDLRVILMSATLDSKLFSEYF--YDAPVIHIPGRTFPVHEYY 162
Score = 55.2 bits (127), Expect = 3e-07
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 458 IRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY 515
IR V S K + YD T M+ L+E W S+A+A QR+GRAGR GVC+ +++ +Y
Sbjct: 303 IRHTVFSAKDR---YDSTKGMESLEEVWFSRANARQRRGRAGRVTSGVCFHLFTRNRY 357
>SB_683| Best HMM Match : zf-C2H2 (HMM E-Value=0.85)
Length = 272
Score = 126 bits (305), Expect = 8e-29
Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 21/275 (7%)
Query: 890 TTKPYIVNSMRMPAAQTLLLLAHSIDTNIGFTRIVCDSWLLLEFPYPETGLNLLMKAVRL 949
T KPY+VNSMR+P QTL+L A S+DTN TR++ D+WL + P +T + + ++L
Sbjct: 2 TNKPYLVNSMRVPGLQTLMLFARSLDTNADLTRVIADTWLEVRLPDAKTAQSAMSAVIQL 61
Query: 950 RRRWNDLVNRRLADANPAKTVESELEKQKHSKSSYEETQYELSCDISSYMNSEVYYTIKR 1009
R W L+ RL DA + + LE K + + L+ +S +++S + ++ +R
Sbjct: 62 RSTWMRLLQLRL-DAKRSGSETGLLEMNK-----CRDLERALAKKLSEFLDSNIRFSTRR 115
Query: 1010 LLPGDLKILYYG---NDEAHPNIDP-NPFE-EGFECRPHEKKGGVYVTDNIVYNCVVD-- 1062
LLP + + LY G +D+ + PF+ H KGG+ V + + YNC++D
Sbjct: 116 LLPSEDQHLYKGLMDSDDFDLTAEGILPFQGPSTPLEVHPTKGGIRVNEYLTYNCLMDEI 175
Query: 1063 TDWSYNTYQETYGLPWTCEKCEMSMCLSPLERLQHKLFTCSARA----VKEEPGPSKTVK 1118
+ + E WTC KC M ++ LERL+H+ +E +K +
Sbjct: 176 QAEAASAAAEYIQKHWTCPKCGEKMIITVLERLRHENDCHETEGQESIATQESQDTKPSE 235
Query: 1119 ENKPNC----KEFKCENCEAVLYSTPVDILRHKKT 1149
+KP+ +E+ C +C+ T +IL+HK++
Sbjct: 236 FSKPDMAHLRREYFCADCKKEFVFTSSEILKHKRS 270
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 108 bits (259), Expect = 3e-23
Identities = 85/255 (33%), Positives = 128/255 (50%), Gaps = 53/255 (20%)
Query: 166 ELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYL--HEAG---FQNIACTQPRRI 220
+LP+ +Y HEIV+ ++N ++ G TG GK+TQVPQY+ H A + NI TQPRRI
Sbjct: 73 DLPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAKQRRYCNILVTQPRRI 132
Query: 221 ACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQM-SSETLPSYDV 279
A VS++KRV E S +GYQI +K + DT++ ++T G+LL+++ S++ + +
Sbjct: 133 AAVSIAKRVCQERDCPLGSLIGYQIGRDKCVSEDTRLAYVTTGVLLQKLISAKNMNQFTH 192
Query: 280 IILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFAS------ESAV 333
+I+DE+ VLMSAT+ LF YFA E A
Sbjct: 193 VIIDEV--------------------------VLMSATLESDLFSRYFAMPIRGQLEGAP 226
Query: 334 VIQVPGRLYTIELNYKPIFMEERPTRDDRLD-----PQPY---VQIMQLID-------NK 378
V V G ++ ++ Y P D L+ P+ Y QI+ +D +
Sbjct: 227 VFAVEGNIFPVQEYYLEDLASVGPLPDILLEEPEIAPEGYDLAAQIIVYLDYWERAGVSA 286
Query: 379 YPKDERGDLLIFMSG 393
K ERG +LIF+ G
Sbjct: 287 DTKVERGSVLIFLPG 301
Score = 54.0 bits (124), Expect = 7e-07
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 496 GRAGRTGPGVCYRIYSEQQYTD-MEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFID- 553
GRAGR G CYR+ S + Y + M + PE+ R P + + +
Sbjct: 301 GRAGRVSAGCCYRMVSRRFYEECMSDYGVPELQRCPLEQVVLQVKLLDLGAPKAILSLAL 360
Query: 554 TPPE-ESIENALLELKQHGALTS----------NEKLTALGKALSNLPVEVSLAKALVIG 602
PP+ E IE +L LKQ GAL++ + +LT +GK L LPV+V + K + G
Sbjct: 361 QPPDIEDIERTVLLLKQVGALSTIMKGRRIDPYDGELTFIGKVLGTLPVDVRIGKLMEGG 420
Query: 603 SAT 605
T
Sbjct: 421 ENT 423
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 665 KAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNL 704
K E G +WC+++GI R+ E+ L L L+D N+
Sbjct: 415 KLMEGGENTWCRKKGIVVPRIREVDALVKDLTERLKDLNV 454
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 106 bits (254), Expect = 1e-22
Identities = 63/140 (45%), Positives = 88/140 (62%), Gaps = 5/140 (3%)
Query: 212 IACTQPRRIACVSLSKRVAYEMLTQFES-KVGYQIRFE-KSKTSDTKICFITEGLLLRQM 269
IACTQPRRI+ +S+++RVA E Q VGYQIR E + S I + T G+L R +
Sbjct: 20 IACTQPRRISAISVAERVAIERGEQCGGGSVGYQIRLESRLPRSRGSIIYCTTGVLQRWL 79
Query: 270 SSET-LPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFA 328
S+ L S +I+DEIHER LM DFLL I++ L+ R ++KLVLMSAT+N ++F YF
Sbjct: 80 VSDPFLKSTSHVIIDEIHERDLMSDFLLIIIRDLLPRRPDLKLVLMSATLNAEIFSTYFG 139
Query: 329 SESAVVIQVPGRLYTIELNY 348
++ +PG Y ++ Y
Sbjct: 140 --KCPMLHIPGFTYPVKEFY 157
Score = 63.3 bits (147), Expect = 1e-09
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 430 KVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKE 469
+VFD PP GVRK +I+TNIAETS+TID + FVVD GKVKE
Sbjct: 200 EVFDRPPLGVRKIVIATNIAETSITIDDVVFVVDCGKVKE 239
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 88.2 bits (209), Expect = 3e-17
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 7/94 (7%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQ-------NIAC 214
+ +LPV NY+H I+ AV RV+I+ G TGCGK+TQVPQ++ +A + NI
Sbjct: 302 EQRSQLPVFNYKHAILQAVHENRVIIIKGATGCGKTTQVPQFVLDAFLENGQGAECNIVV 361
Query: 215 TQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFE 248
TQPRRI+ VS+++RVA E + VGY +RF+
Sbjct: 362 TQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 395
>SB_1256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 82.2 bits (194), Expect = 2e-15
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 379 YPKDERGDLLIFMSGVQEITAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDK 430
YP ERGDLLIF+SG+ EI+A+ DAA++YA++T+ WIVLPLHS LS+ EQDK
Sbjct: 1 YPPTERGDLLIFLSGMSEISAVVDAAREYAQRTRRWIVLPLHSSLSVDEQDK 52
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 70.9 bits (166), Expect = 5e-12
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 255 TKICFITEGLLLRQM--SSETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLV 312
T + + T G+LLR + +L II+DEIHER DFLL L+ L+ NIKLV
Sbjct: 64 TLLTYCTNGVLLRTLMQGDNSLSFITHIIVDEIHERDRFSDFLLISLRELLSFNKNIKLV 123
Query: 313 LMSATINIKLFEEYFASESAVVIQVPGRLYTIEL 346
LMSA ++I LF EYF VI VPGR + +++
Sbjct: 124 LMSAALDIDLFVEYFG--KCPVINVPGRCFDVDV 155
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 70.5 bits (165), Expect = 7e-12
Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 18/96 (18%)
Query: 416 VLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPT 475
VLP++SGL EQ VF PP RK I++TN+AE S+TIDGI V +S V E
Sbjct: 107 VLPMYSGLPYEEQMLVFKRPPPNTRKVIVATNVAEASITIDGI--VYESLVVTE------ 158
Query: 476 SKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYS 511
IS+ASA+QR GRAGR G YR+Y+
Sbjct: 159 ----------ISQASAEQRAGRAGRVRAGKAYRLYT 184
>SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 431 VFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGK 466
VFD P+GVRKCI+STNIAETS+TIDGIRF+ DSGK
Sbjct: 1 VFDVAPDGVRKCIVSTNIAETSITIDGIRFIADSGK 36
>SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 256
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 211 NIACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFE 248
NI TQPRRI+ VS+++RVA E + VGY +RF+
Sbjct: 19 NIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 56
>SB_15717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 34.3 bits (75), Expect = 0.58
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 558 ESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALAL 617
E++ AL L GAL N LT LG ++ P++ LAK ++ A+ + + + L++
Sbjct: 3 ETLMRALELLNYLGALDDNGDLTELGSMMAEFPLDPQLAKMVI---ASCEFNCSNEILSI 59
Query: 618 TAALGIRSIFT 628
T+ L R T
Sbjct: 60 TSMLSARQPVT 70
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 33.9 bits (74), Expect = 0.76
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 699 LQDNNLSETPEPETMSS-AERALRHGQMKQLKDMRRQYKQKSAEDSKR-KKRLK 750
+Q+ + E+P E +S A ALR + Q+KD+ RQY+++ E+ + +KR++
Sbjct: 670 MQNGHGIESPHNEVLSDDAAEALRIKYLGQIKDLERQYREQPPEEQEALQKRIE 723
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 33.9 bits (74), Expect = 0.76
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 663 RVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRH 722
R + E+R KR+ EE+ E ++ +LR L L E E + + ++
Sbjct: 248 RRQEEKRRAEEEAKRKAEEEKAAREKAEMEEKLRRL----KLQEKEEKRKLEAEKKEKER 303
Query: 723 GQMKQLKDMRRQYKQKSAEDSKRKK 747
+ +Q ++ R+Q +++ AE+ R+K
Sbjct: 304 VEREQREERRKQEEKRRAEEQARRK 328
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 676 KRRGIEEQRLYEL---TKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQLKDMR 732
+++ ++E+R+ +L +LAAQ R L + L E E + E+ L + K+ ++ R
Sbjct: 192 RQKALKEERMRKLQEEARLAAQ-RALEEKRKLEE--ERKEQERKEKELAELEKKRQEERR 248
Query: 733 RQYKQKSAEDSKRKK 747
RQ +++ AE+ ++K
Sbjct: 249 RQEEKRRAEEEAKRK 263
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 662 LRVKAEERGGRSWCKRRGIEEQRLY-ELTKLAAQLRGLLQDNNLSETPEPETMSSAERAL 720
LRV+AE + +R E QR E ++ +++ L + +E E ++ E L
Sbjct: 423 LRVEAERQREEDERQRAEDERQRAEDERQRVKHEMQRLKDERRRAEEDE---IARQEEEL 479
Query: 721 RHGQMKQLKDMRRQYKQKSAEDSKRKK 747
R Q ++ K+++R + + AE+ KR+K
Sbjct: 480 RRLQEQREKELKRYKELQMAEEEKRRK 506
>SB_20945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 33.9 bits (74), Expect = 0.76
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 186 VIVAGDTGCGKSTQVPQYLHEAGFQNIACTQ 216
V++ G TGCGKS Q + G N++CT+
Sbjct: 19 VVLLGPTGCGKSVQAELLASKYGLINVSCTE 49
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 32.7 bits (71), Expect = 1.8
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 704 LSETPEPETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRKKRL--KIDSWEIVXXXX 761
LS+ PE + L H +KD R+QY+Q S + +K +I S E+
Sbjct: 1010 LSDPPEESERTDENNRLSH--RVSVKDRRKQYEQPSGPNELNRKSAASEIGSSEVASRKQ 1067
Query: 762 XXXXXVFDIRDIEFRMSNDAQRIQALISGSSASSGRD 798
+ R ++ ND + +G SSG D
Sbjct: 1068 TFEESGRNTRRDSYKRLNDLTKKARSSTGLDGSSGTD 1104
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 1125 KEFKCENCEAVLYSTPVDILRHKKTCKKK 1153
K FKCE CE +S P + RH K C K+
Sbjct: 690 KAFKCERCEK-KFSQPYHLTRHVKGCHKE 717
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 678 RGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQLKDMRRQYKQ 737
R +EE+R E + A+ R + ++ E E ER R + + ++ RR+ ++
Sbjct: 1093 RRLEEERKREEERRLAEQRRVEEERRRKEEEEQRRREEEERRRREEEDRLREEARRREEE 1152
Query: 738 KSAEDSK-RKKRLKIDSWE 755
+ ED + ++R + WE
Sbjct: 1153 RRLEDERWEREREEERRWE 1171
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 222 CVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMS-SETLPSYDVI 280
C+S + + E++ ++ K G IR +T T +C + R S + P YDV
Sbjct: 324 CLSAGEPLNPEVMVDWKEKTGLDIREGYGQTETTLLCGTFRCIETRPGSMGKPAPGYDVR 383
Query: 281 ILDE 284
++DE
Sbjct: 384 VIDE 387
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 662 LRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALR 721
L + +R R KR+ +EEQR E L +L + D E E LR
Sbjct: 230 LEQQRRQREQRIAEKRKRLEEQRKVESLHLLKELLKRVADKRAEEEEEKRKREKELEMLR 289
Query: 722 HGQMKQLKDMRRQYKQKSAEDSKRKKRLKIDSWE 755
Q+++ K + + +++ E+ +++K++K++ E
Sbjct: 290 --QIEE-KKRKLEEEERIKEEVEKQKKIKLEQQE 320
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 665 KAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQ 724
KAEE K+RG+E + LA Q + L ++ + E E +R + +
Sbjct: 65 KAEEEMMLQEHKQRGLERSKQEAQRLLALQEQHLKEEQEIKNEVEKERQEEEKRRMEIEK 124
Query: 725 MKQLKDMRR--QYKQKSAEDSK 744
+ + +R + KQK E+SK
Sbjct: 125 QRMESEKKRILESKQKRIEESK 146
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 665 KAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQ 724
KAEE K+RG+E + LA Q + L ++ + E E +R + +
Sbjct: 183 KAEEEMMLQEHKQRGLERSKQEAQRLLALQEQHLKEEQEIKNEVEKERQEEEKRRMEIEK 242
Query: 725 MKQLKDMRR--QYKQKSAEDSK 744
+ + +R + KQK E+SK
Sbjct: 243 QRMESEKKRILESKQKRIEESK 264
>SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 700 QDNNLSETPEPETMSSAERALRHGQMKQLKDMRRQYK-QKSAEDSKRKKRLKIDSWEIV 757
Q+ +L++T E R+L+ Q K+ + Q K QK E +RKK+ ++ E++
Sbjct: 29 QERSLAQTLRDEQDEDYRRSLQADQEKERRRREEQEKKQKEEEAERRKKQAILEKLEVI 87
>SB_34450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 851 PRVLMLTEADIQTDPPAGYKSKLPLSAKHQLLCYLSLLETTKPYIVNSMRMPAAQTLLLL 910
PR +L ++ TD G K K L+ + LL +S +T K V R PA + LL+
Sbjct: 219 PRFGLLVVSNYDTDKLRGVKQKRQLAPRFGLL-VMSNYDTDKLRGVKQKRQPAPRFGLLV 277
Query: 911 AHSIDTN 917
+ DT+
Sbjct: 278 VSNYDTD 284
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 667 EERGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMK 726
E+R K+R EE+RL E + + + L++ E + + E+ ++ + +
Sbjct: 391 EKRKREGEVKKRKEEEERLVEARRKEQEEKRKLEEQKRKEEEDRRRKEAEEKRIKEEEAR 450
Query: 727 QLKDMRR-----QYKQKSAEDSKRKKRLKIDSWEIV 757
LK+ RR + ++K+ E+ KRK++ + + +V
Sbjct: 451 -LKEERRSKDEEENRRKADEERKRKEQEEAERNRVV 485
>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
Length = 399
Score = 30.7 bits (66), Expect = 7.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 260 ITEGLLLRQMSSETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNI 309
I +GL+L+ P+ ILD +H+RHL + KCL+ RTN+
Sbjct: 79 IEDGLVLKGKRIVIPPTLRPGILDTLHKRHLAQE------KCLLRARTNV 122
>SB_19207| Best HMM Match : ig (HMM E-Value=1.2e-11)
Length = 418
Score = 30.7 bits (66), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1113 PSKTVKENKPNCKEFKCENCEAVLYSTPV 1141
P+K VKE P C+ ++ + C +Y +PV
Sbjct: 242 PTKKVKEKFPRCEPYRGKVCAEFMYGSPV 270
>SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 30.3 bits (65), Expect = 9.4
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 353 MEERPTRDDRLDPQPYVQIMQLIDNKYPKDER-GDLLIFMSGVQEITAICDAAQQYAEKT 411
M ERP + P P I + D+ Y DE+ G LL + QEI A+ A +Y +
Sbjct: 136 MTERPVKATL--PGPMTIINSIADDFYHDDEKLGSLLAGLLN-QEILALAAAGCKYIQVD 192
Query: 412 KNWIV----LPLHSGLSLAEQDKVFDYPPEGVRKCI 443
+V LH G+ K F P+ V +CI
Sbjct: 193 APVLVRFPDAALHHGIE--HLSKCFSGVPDDVTRCI 226
>SB_33763| Best HMM Match : RVT_1 (HMM E-Value=3.1e-17)
Length = 271
Score = 30.3 bits (65), Expect = 9.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 578 KLTALGKALSNLPVEVSLAKALVIG 602
+LT +GK L LPV+V + K +V+G
Sbjct: 233 ELTFIGKVLGTLPVDVRIGKLMVLG 257
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 473 DPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRV 529
DP + + F+ S +A RAGR G C R + +Q+ ++ ++ V+RV
Sbjct: 632 DPQFRASSFQNFYCSAFNARLHGTRAGRRGGAWCARALNRKQWIQVDFGTSARVTRV 688
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,249,382
Number of Sequences: 59808
Number of extensions: 1536998
Number of successful extensions: 4125
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4015
Number of HSP's gapped (non-prelim): 87
length of query: 1153
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1063
effective length of database: 11,438,737
effective search space: 12159377431
effective search space used: 12159377431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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