GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001572-TA|BGIBMGA001572-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR007502|Helicase-associated region, IPR011709|Protein of unknown
function DUF1605
         (1153 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    31   0.13 
AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450 pr...    26   4.9  
AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    26   4.9  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 709 EPETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRKKRLKIDSWEIV 757
           E E +   E   R  Q +QL+D +RQ  ++  +  +R++RL    W  V
Sbjct: 167 EQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLPAQQWPTV 215


>AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450
           protein.
          Length = 155

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 689 TKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQM 725
           T L    RG++ D NL E P   T  + ER L+ G++
Sbjct: 72  TMLVGMFRGMMLDENLWENP---TQFNPERFLKDGKI 105


>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein protein.
          Length = 90

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 1089 LSPLERLQHKLFTCSARAVKEEPGPSKTVKENKP 1122
            LS LE+++H L  CS R     P P    + N P
Sbjct: 57   LSRLEQMRHNLTGCSERET-TNPAPPDDTRTNAP 89


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,136,758
Number of Sequences: 2123
Number of extensions: 45745
Number of successful extensions: 147
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 145
Number of HSP's gapped (non-prelim): 4
length of query: 1153
length of database: 516,269
effective HSP length: 72
effective length of query: 1081
effective length of database: 363,413
effective search space: 392849453
effective search space used: 392849453
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)